BLASTP 2.2.11 [Jun-05-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= gi|239049447 mitochondrial malic enzyme 3 [Homo sapiens] (604 letters) Database: hs.faa 37,866 sequences; 18,247,518 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gi|239049447 mitochondrial malic enzyme 3 [Homo sapiens] 1226 0.0 gi|62420882 mitochondrial malic enzyme 3 [Homo sapiens] 1226 0.0 gi|62420880 mitochondrial malic enzyme 3 [Homo sapiens] 1226 0.0 gi|4505143 cytosolic malic enzyme 1 [Homo sapiens] 851 0.0 gi|4505145 malic enzyme 2, NAD(+)-dependent, mitochondrial [Homo... 657 0.0 gi|188497637 cell division cycle associated 7-like isoform 3 [Ho... 33 0.99 gi|188497635 cell division cycle associated 7-like isoform 2 [Ho... 33 0.99 gi|31542537 cell division cycle associated 7-like isoform 1 [Hom... 33 0.99 gi|239756897 PREDICTED: similar to hCG1994130 [Homo sapiens] 31 2.9 gi|239751393 PREDICTED: hypothetical protein XP_002347835 [Homo ... 31 2.9 gi|239745900 PREDICTED: hypothetical protein XP_002343613 [Homo ... 31 2.9 gi|93277088 mediator of RNA polymerase II transcription, subunit... 30 4.9 gi|33286436 gametogenetin [Homo sapiens] 30 4.9 gi|19913432 ATPase, H+ transporting, lysosomal, V0 subunit d1 [H... 30 6.4 >gi|239049447 mitochondrial malic enzyme 3 [Homo sapiens] Length = 604 Score = 1226 bits (3172), Expect = 0.0 Identities = 604/604 (100%), Positives = 604/604 (100%) Query: 1 MGAALGTGTRLAPWPGRACGALPRWTPTAPAQGCHSKPGPARPVPLKKRGYDVTRNPHLN 60 MGAALGTGTRLAPWPGRACGALPRWTPTAPAQGCHSKPGPARPVPLKKRGYDVTRNPHLN Sbjct: 1 MGAALGTGTRLAPWPGRACGALPRWTPTAPAQGCHSKPGPARPVPLKKRGYDVTRNPHLN 60 Query: 61 KGMAFTLEERLQLGIHGLIPPCFLSQDVQLLRIMRYYERQQSDLDKYIILMTLQDRNEKL 120 KGMAFTLEERLQLGIHGLIPPCFLSQDVQLLRIMRYYERQQSDLDKYIILMTLQDRNEKL Sbjct: 61 KGMAFTLEERLQLGIHGLIPPCFLSQDVQLLRIMRYYERQQSDLDKYIILMTLQDRNEKL 120 Query: 121 FYRVLTSDVEKFMPIVYTPTVGLACQHYGLTFRRPRGLFITIHDKGHLATMLNSWPEDNI 180 FYRVLTSDVEKFMPIVYTPTVGLACQHYGLTFRRPRGLFITIHDKGHLATMLNSWPEDNI Sbjct: 121 FYRVLTSDVEKFMPIVYTPTVGLACQHYGLTFRRPRGLFITIHDKGHLATMLNSWPEDNI 180 Query: 181 KAVVVTDGERILGLGDLGCYGMGIPVGKLALYTACGGVNPQQCLPVLLDVGTNNEELLRD 240 KAVVVTDGERILGLGDLGCYGMGIPVGKLALYTACGGVNPQQCLPVLLDVGTNNEELLRD Sbjct: 181 KAVVVTDGERILGLGDLGCYGMGIPVGKLALYTACGGVNPQQCLPVLLDVGTNNEELLRD 240 Query: 241 PLYIGLKHQRVHGKAYDDLLDEFMQAVTDKFGINCLIQFEDFANANAFRLLNKYRNKYCM 300 PLYIGLKHQRVHGKAYDDLLDEFMQAVTDKFGINCLIQFEDFANANAFRLLNKYRNKYCM Sbjct: 241 PLYIGLKHQRVHGKAYDDLLDEFMQAVTDKFGINCLIQFEDFANANAFRLLNKYRNKYCM 300 Query: 301 FNDDIQGTASVAVAGILAALRITKNKLSNHVFVFQGAGEAAMGIAHLLVMALEKEGVPKA 360 FNDDIQGTASVAVAGILAALRITKNKLSNHVFVFQGAGEAAMGIAHLLVMALEKEGVPKA Sbjct: 301 FNDDIQGTASVAVAGILAALRITKNKLSNHVFVFQGAGEAAMGIAHLLVMALEKEGVPKA 360 Query: 361 EATRKIWMVDSKGLIVKGRSHLNHEKEMFAQDHPEVNSLEEVVRLVKPTAIIGVAAIAGA 420 EATRKIWMVDSKGLIVKGRSHLNHEKEMFAQDHPEVNSLEEVVRLVKPTAIIGVAAIAGA Sbjct: 361 EATRKIWMVDSKGLIVKGRSHLNHEKEMFAQDHPEVNSLEEVVRLVKPTAIIGVAAIAGA 420 Query: 421 FTEQILRDMASFHERPIIFALSNPTSKAECTAEKCYRVTEGRGIFASGSPFKSVTLEDGK 480 FTEQILRDMASFHERPIIFALSNPTSKAECTAEKCYRVTEGRGIFASGSPFKSVTLEDGK Sbjct: 421 FTEQILRDMASFHERPIIFALSNPTSKAECTAEKCYRVTEGRGIFASGSPFKSVTLEDGK 480 Query: 481 TFIPGQGNNAYVFPGVALGVIAGGIRHIPDEIFLLTAEQIAQEVSEQHLSQGRLYPPLST 540 TFIPGQGNNAYVFPGVALGVIAGGIRHIPDEIFLLTAEQIAQEVSEQHLSQGRLYPPLST Sbjct: 481 TFIPGQGNNAYVFPGVALGVIAGGIRHIPDEIFLLTAEQIAQEVSEQHLSQGRLYPPLST 540 Query: 541 IRDVSLRIAIKVLDYAYKHNLASYYPEPKDKEAFVRSLVYTPDYDSFTLDSYTWPKEAMN 600 IRDVSLRIAIKVLDYAYKHNLASYYPEPKDKEAFVRSLVYTPDYDSFTLDSYTWPKEAMN Sbjct: 541 IRDVSLRIAIKVLDYAYKHNLASYYPEPKDKEAFVRSLVYTPDYDSFTLDSYTWPKEAMN 600 Query: 601 VQTV 604 VQTV Sbjct: 601 VQTV 604 >gi|62420882 mitochondrial malic enzyme 3 [Homo sapiens] Length = 604 Score = 1226 bits (3172), Expect = 0.0 Identities = 604/604 (100%), Positives = 604/604 (100%) Query: 1 MGAALGTGTRLAPWPGRACGALPRWTPTAPAQGCHSKPGPARPVPLKKRGYDVTRNPHLN 60 MGAALGTGTRLAPWPGRACGALPRWTPTAPAQGCHSKPGPARPVPLKKRGYDVTRNPHLN Sbjct: 1 MGAALGTGTRLAPWPGRACGALPRWTPTAPAQGCHSKPGPARPVPLKKRGYDVTRNPHLN 60 Query: 61 KGMAFTLEERLQLGIHGLIPPCFLSQDVQLLRIMRYYERQQSDLDKYIILMTLQDRNEKL 120 KGMAFTLEERLQLGIHGLIPPCFLSQDVQLLRIMRYYERQQSDLDKYIILMTLQDRNEKL Sbjct: 61 KGMAFTLEERLQLGIHGLIPPCFLSQDVQLLRIMRYYERQQSDLDKYIILMTLQDRNEKL 120 Query: 121 FYRVLTSDVEKFMPIVYTPTVGLACQHYGLTFRRPRGLFITIHDKGHLATMLNSWPEDNI 180 FYRVLTSDVEKFMPIVYTPTVGLACQHYGLTFRRPRGLFITIHDKGHLATMLNSWPEDNI Sbjct: 121 FYRVLTSDVEKFMPIVYTPTVGLACQHYGLTFRRPRGLFITIHDKGHLATMLNSWPEDNI 180 Query: 181 KAVVVTDGERILGLGDLGCYGMGIPVGKLALYTACGGVNPQQCLPVLLDVGTNNEELLRD 240 KAVVVTDGERILGLGDLGCYGMGIPVGKLALYTACGGVNPQQCLPVLLDVGTNNEELLRD Sbjct: 181 KAVVVTDGERILGLGDLGCYGMGIPVGKLALYTACGGVNPQQCLPVLLDVGTNNEELLRD 240 Query: 241 PLYIGLKHQRVHGKAYDDLLDEFMQAVTDKFGINCLIQFEDFANANAFRLLNKYRNKYCM 300 PLYIGLKHQRVHGKAYDDLLDEFMQAVTDKFGINCLIQFEDFANANAFRLLNKYRNKYCM Sbjct: 241 PLYIGLKHQRVHGKAYDDLLDEFMQAVTDKFGINCLIQFEDFANANAFRLLNKYRNKYCM 300 Query: 301 FNDDIQGTASVAVAGILAALRITKNKLSNHVFVFQGAGEAAMGIAHLLVMALEKEGVPKA 360 FNDDIQGTASVAVAGILAALRITKNKLSNHVFVFQGAGEAAMGIAHLLVMALEKEGVPKA Sbjct: 301 FNDDIQGTASVAVAGILAALRITKNKLSNHVFVFQGAGEAAMGIAHLLVMALEKEGVPKA 360 Query: 361 EATRKIWMVDSKGLIVKGRSHLNHEKEMFAQDHPEVNSLEEVVRLVKPTAIIGVAAIAGA 420 EATRKIWMVDSKGLIVKGRSHLNHEKEMFAQDHPEVNSLEEVVRLVKPTAIIGVAAIAGA Sbjct: 361 EATRKIWMVDSKGLIVKGRSHLNHEKEMFAQDHPEVNSLEEVVRLVKPTAIIGVAAIAGA 420 Query: 421 FTEQILRDMASFHERPIIFALSNPTSKAECTAEKCYRVTEGRGIFASGSPFKSVTLEDGK 480 FTEQILRDMASFHERPIIFALSNPTSKAECTAEKCYRVTEGRGIFASGSPFKSVTLEDGK Sbjct: 421 FTEQILRDMASFHERPIIFALSNPTSKAECTAEKCYRVTEGRGIFASGSPFKSVTLEDGK 480 Query: 481 TFIPGQGNNAYVFPGVALGVIAGGIRHIPDEIFLLTAEQIAQEVSEQHLSQGRLYPPLST 540 TFIPGQGNNAYVFPGVALGVIAGGIRHIPDEIFLLTAEQIAQEVSEQHLSQGRLYPPLST Sbjct: 481 TFIPGQGNNAYVFPGVALGVIAGGIRHIPDEIFLLTAEQIAQEVSEQHLSQGRLYPPLST 540 Query: 541 IRDVSLRIAIKVLDYAYKHNLASYYPEPKDKEAFVRSLVYTPDYDSFTLDSYTWPKEAMN 600 IRDVSLRIAIKVLDYAYKHNLASYYPEPKDKEAFVRSLVYTPDYDSFTLDSYTWPKEAMN Sbjct: 541 IRDVSLRIAIKVLDYAYKHNLASYYPEPKDKEAFVRSLVYTPDYDSFTLDSYTWPKEAMN 600 Query: 601 VQTV 604 VQTV Sbjct: 601 VQTV 604 >gi|62420880 mitochondrial malic enzyme 3 [Homo sapiens] Length = 604 Score = 1226 bits (3172), Expect = 0.0 Identities = 604/604 (100%), Positives = 604/604 (100%) Query: 1 MGAALGTGTRLAPWPGRACGALPRWTPTAPAQGCHSKPGPARPVPLKKRGYDVTRNPHLN 60 MGAALGTGTRLAPWPGRACGALPRWTPTAPAQGCHSKPGPARPVPLKKRGYDVTRNPHLN Sbjct: 1 MGAALGTGTRLAPWPGRACGALPRWTPTAPAQGCHSKPGPARPVPLKKRGYDVTRNPHLN 60 Query: 61 KGMAFTLEERLQLGIHGLIPPCFLSQDVQLLRIMRYYERQQSDLDKYIILMTLQDRNEKL 120 KGMAFTLEERLQLGIHGLIPPCFLSQDVQLLRIMRYYERQQSDLDKYIILMTLQDRNEKL Sbjct: 61 KGMAFTLEERLQLGIHGLIPPCFLSQDVQLLRIMRYYERQQSDLDKYIILMTLQDRNEKL 120 Query: 121 FYRVLTSDVEKFMPIVYTPTVGLACQHYGLTFRRPRGLFITIHDKGHLATMLNSWPEDNI 180 FYRVLTSDVEKFMPIVYTPTVGLACQHYGLTFRRPRGLFITIHDKGHLATMLNSWPEDNI Sbjct: 121 FYRVLTSDVEKFMPIVYTPTVGLACQHYGLTFRRPRGLFITIHDKGHLATMLNSWPEDNI 180 Query: 181 KAVVVTDGERILGLGDLGCYGMGIPVGKLALYTACGGVNPQQCLPVLLDVGTNNEELLRD 240 KAVVVTDGERILGLGDLGCYGMGIPVGKLALYTACGGVNPQQCLPVLLDVGTNNEELLRD Sbjct: 181 KAVVVTDGERILGLGDLGCYGMGIPVGKLALYTACGGVNPQQCLPVLLDVGTNNEELLRD 240 Query: 241 PLYIGLKHQRVHGKAYDDLLDEFMQAVTDKFGINCLIQFEDFANANAFRLLNKYRNKYCM 300 PLYIGLKHQRVHGKAYDDLLDEFMQAVTDKFGINCLIQFEDFANANAFRLLNKYRNKYCM Sbjct: 241 PLYIGLKHQRVHGKAYDDLLDEFMQAVTDKFGINCLIQFEDFANANAFRLLNKYRNKYCM 300 Query: 301 FNDDIQGTASVAVAGILAALRITKNKLSNHVFVFQGAGEAAMGIAHLLVMALEKEGVPKA 360 FNDDIQGTASVAVAGILAALRITKNKLSNHVFVFQGAGEAAMGIAHLLVMALEKEGVPKA Sbjct: 301 FNDDIQGTASVAVAGILAALRITKNKLSNHVFVFQGAGEAAMGIAHLLVMALEKEGVPKA 360 Query: 361 EATRKIWMVDSKGLIVKGRSHLNHEKEMFAQDHPEVNSLEEVVRLVKPTAIIGVAAIAGA 420 EATRKIWMVDSKGLIVKGRSHLNHEKEMFAQDHPEVNSLEEVVRLVKPTAIIGVAAIAGA Sbjct: 361 EATRKIWMVDSKGLIVKGRSHLNHEKEMFAQDHPEVNSLEEVVRLVKPTAIIGVAAIAGA 420 Query: 421 FTEQILRDMASFHERPIIFALSNPTSKAECTAEKCYRVTEGRGIFASGSPFKSVTLEDGK 480 FTEQILRDMASFHERPIIFALSNPTSKAECTAEKCYRVTEGRGIFASGSPFKSVTLEDGK Sbjct: 421 FTEQILRDMASFHERPIIFALSNPTSKAECTAEKCYRVTEGRGIFASGSPFKSVTLEDGK 480 Query: 481 TFIPGQGNNAYVFPGVALGVIAGGIRHIPDEIFLLTAEQIAQEVSEQHLSQGRLYPPLST 540 TFIPGQGNNAYVFPGVALGVIAGGIRHIPDEIFLLTAEQIAQEVSEQHLSQGRLYPPLST Sbjct: 481 TFIPGQGNNAYVFPGVALGVIAGGIRHIPDEIFLLTAEQIAQEVSEQHLSQGRLYPPLST 540 Query: 541 IRDVSLRIAIKVLDYAYKHNLASYYPEPKDKEAFVRSLVYTPDYDSFTLDSYTWPKEAMN 600 IRDVSLRIAIKVLDYAYKHNLASYYPEPKDKEAFVRSLVYTPDYDSFTLDSYTWPKEAMN Sbjct: 541 IRDVSLRIAIKVLDYAYKHNLASYYPEPKDKEAFVRSLVYTPDYDSFTLDSYTWPKEAMN 600 Query: 601 VQTV 604 VQTV Sbjct: 601 VQTV 604 >gi|4505143 cytosolic malic enzyme 1 [Homo sapiens] Length = 572 Score = 851 bits (2199), Expect = 0.0 Identities = 404/556 (72%), Positives = 485/556 (87%) Query: 48 KRGYDVTRNPHLNKGMAFTLEERLQLGIHGLIPPCFLSQDVQLLRIMRYYERQQSDLDKY 107 +RGY +TRNPHLNK +AFTLEER QL IHGL+PP F SQ++Q+LR+++ +E SD D+Y Sbjct: 13 QRGYLLTRNPHLNKDLAFTLEERQQLNIHGLLPPSFNSQEIQVLRVVKNFEHLNSDFDRY 72 Query: 108 IILMTLQDRNEKLFYRVLTSDVEKFMPIVYTPTVGLACQHYGLTFRRPRGLFITIHDKGH 167 ++LM LQDRNEKLFYRVLTSD+EKFMPIVYTPTVGLACQ Y L FR+PRGLFITIHD+GH Sbjct: 73 LLLMDLQDRNEKLFYRVLTSDIEKFMPIVYTPTVGLACQQYSLVFRKPRGLFITIHDRGH 132 Query: 168 LATMLNSWPEDNIKAVVVTDGERILGLGDLGCYGMGIPVGKLALYTACGGVNPQQCLPVL 227 +A++LN+WPED IKA+VVTDGERILGLGDLGC GMGIPVGKLALYTACGG+NPQ+CLPV+ Sbjct: 133 IASVLNAWPEDVIKAIVVTDGERILGLGDLGCNGMGIPVGKLALYTACGGMNPQECLPVI 192 Query: 228 LDVGTNNEELLRDPLYIGLKHQRVHGKAYDDLLDEFMQAVTDKFGINCLIQFEDFANANA 287 LDVGT NEELL+DPLYIGL+ +RV G YDD LDEFM+AV+ K+G+NCLIQFEDFAN NA Sbjct: 193 LDVGTENEELLKDPLYIGLRQRRVRGSEYDDFLDEFMEAVSSKYGMNCLIQFEDFANVNA 252 Query: 288 FRLLNKYRNKYCMFNDDIQGTASVAVAGILAALRITKNKLSNHVFVFQGAGEAAMGIAHL 347 FRLLNKYRN+YC FNDDIQGTASVAVAG+LAALRITKNKLS+ +FQGAGEAA+GIAHL Sbjct: 253 FRLLNKYRNQYCTFNDDIQGTASVAVAGLLAALRITKNKLSDQTILFQGAGEAALGIAHL 312 Query: 348 LVMALEKEGVPKAEATRKIWMVDSKGLIVKGRSHLNHEKEMFAQDHPEVNSLEEVVRLVK 407 +VMALEKEG+PK +A +KIW+VDSKGLIVKGR+ L EKE FA +H E+ +LE +V+ +K Sbjct: 313 IVMALEKEGLPKEKAIKKIWLVDSKGLIVKGRASLTQEKEKFAHEHEEMKNLEAIVQEIK 372 Query: 408 PTAIIGVAAIAGAFTEQILRDMASFHERPIIFALSNPTSKAECTAEKCYRVTEGRGIFAS 467 PTA+IGVAAI GAF+EQIL+DMA+F+ERPIIFALSNPTSKAEC+AE+CY++T+GR IFAS Sbjct: 373 PTALIGVAAIGGAFSEQILKDMAAFNERPIIFALSNPTSKAECSAEQCYKITKGRAIFAS 432 Query: 468 GSPFKSVTLEDGKTFIPGQGNNAYVFPGVALGVIAGGIRHIPDEIFLLTAEQIAQEVSEQ 527 GSPF VTL +G+T PGQGNN+YVFPGVALGV+A G+R I D IFL TAE IAQ+VS++ Sbjct: 433 GSPFDPVTLPNGQTLYPGQGNNSYVFPGVALGVVACGLRQITDNIFLTTAEVIAQQVSDK 492 Query: 528 HLSQGRLYPPLSTIRDVSLRIAIKVLDYAYKHNLASYYPEPKDKEAFVRSLVYTPDYDSF 587 HL +GRLYPPL+TIRDVSL+IA K++ AY+ A+ YPEP++KEAFVRS +Y+ DYD Sbjct: 493 HLEEGRLYPPLNTIRDVSLKIAEKIVKDAYQEKTATVYPEPQNKEAFVRSQMYSTDYDQI 552 Query: 588 TLDSYTWPKEAMNVQT 603 D Y+WP+E +QT Sbjct: 553 LPDCYSWPEEVQKIQT 568 >gi|4505145 malic enzyme 2, NAD(+)-dependent, mitochondrial [Homo sapiens] Length = 584 Score = 657 bits (1694), Expect = 0.0 Identities = 314/560 (56%), Positives = 417/560 (74%), Gaps = 3/560 (0%) Query: 42 RPVPLKKRGYDVTRNPHLNKGMAFTLEERLQLGIHGLIPPCFLSQDVQLLRIMRYYERQQ 101 R + +K++G + NP NKGMAFTL+ER LG+ GL+PP +QD+Q LR R ++ Sbjct: 17 RHLHIKEKGKPLMLNPRTNKGMAFTLQERQMLGLQGLLPPKIETQDIQALRFHRNLKKMT 76 Query: 102 SDLDKYIILMTLQDRNEKLFYRVLTSDVEKFMPIVYTPTVGLACQHYGLTFRRPRGLFIT 161 S L+KYI +M +Q+RNEKLFYR+L D+E MPIVYTPTVGLAC YG FRRP+GLFI+ Sbjct: 77 SPLEKYIYIMGIQERNEKLFYRILQDDIESLMPIVYTPTVGLACSQYGHIFRRPKGLFIS 136 Query: 162 IHDKGHLATMLNSWPEDNIKAVVVTDGERILGLGDLGCYGMGIPVGKLALYTACGGVNPQ 221 I D+GH+ +++++WPE+++KAVVVTDGERILGLGDLG YGMGIPVGKL LYTAC G+ P Sbjct: 137 ISDRGHVRSIVDNWPENHVKAVVVTDGERILGLGDLGVYGMGIPVGKLCLYTACAGIRPD 196 Query: 222 QCLPVLLDVGTNNEELLRDPLYIGLKHQRVHGKAYDDLLDEFMQAVTDKFGINCLIQFED 281 +CLPV +DVGT+N LL+DP Y+GL +R + YDDL+DEFM+A+TD++G N LIQFED Sbjct: 197 RCLPVCIDVGTDNIALLKDPFYMGLYQKRDRTQQYDDLIDEFMKAITDRYGRNTLIQFED 256 Query: 282 FANANAFRLLNKYRNKYCMFNDDIQGTASVAVAGILAALRITKNKLSNHVFVFQGAGEAA 341 F N NAFR L KYR KYC FNDDIQGTA+VA+AG+LAA ++ +S H +F GAGEAA Sbjct: 257 FGNHNAFRFLRKYREKYCTFNDDIQGTAAVALAGLLAAQKVISKPISEHKILFLGAGEAA 316 Query: 342 MGIAHLLVMALEKEGVPKAEATRKIWMVDSKGLIVKGR-SHLNHEKEMFAQDHPE--VNS 398 +GIA+L+VM++ + G+ + EA +KIWM D GL+VKGR + ++ +E F PE ++ Sbjct: 317 LGIANLIVMSMVENGLSEQEAQKKIWMFDKYGLLVKGRKAKIDSYQEPFTHSAPESIPDT 376 Query: 399 LEEVVRLVKPTAIIGVAAIAGAFTEQILRDMASFHERPIIFALSNPTSKAECTAEKCYRV 458 E+ V ++KP+ IIGVA FT ++R MAS +ERP+IFALSNPT++AECTAE+ Y + Sbjct: 377 FEDAVNILKPSTIIGVAGAGRLFTPDVIRAMASINERPVIFALSNPTAQAECTAEEAYTL 436 Query: 459 TEGRGIFASGSPFKSVTLEDGKTFIPGQGNNAYVFPGVALGVIAGGIRHIPDEIFLLTAE 518 TEGR +FASGSPF V L DG+ F PGQGNN Y+FPGVAL VI RHI D +FL A+ Sbjct: 437 TEGRCLFASGSPFGPVKLTDGRVFTPGQGNNVYIFPGVALAVILCNTRHISDSVFLEAAK 496 Query: 519 QIAQEVSEQHLSQGRLYPPLSTIRDVSLRIAIKVLDYAYKHNLASYYPEPKDKEAFVRSL 578 + +++++ L+QGRLYPPL+ I++VS+ IAIKV +Y Y + +A YPEP+DK +V+ Sbjct: 497 ALTSQLTDEELAQGRLYPPLANIQEVSINIAIKVTEYLYANKMAFRYPEPEDKAKYVKER 556 Query: 579 VYTPDYDSFTLDSYTWPKEA 598 + +YDS D Y WP+ A Sbjct: 557 TWRSEYDSLLPDVYEWPESA 576 >gi|188497637 cell division cycle associated 7-like isoform 3 [Homo sapiens] Length = 408 Score = 32.7 bits (73), Expect = 0.99 Identities = 37/124 (29%), Positives = 53/124 (42%), Gaps = 15/124 (12%) Query: 370 DSKGLIVKGRSHLNHEKEMFAQDHPEVNSLEEVVRLVKPTAIIGVAAIAGAFTE-QILRD 428 +S ++K ++ K M AQ E+NS+ + + PT+ + AF+E QI R Sbjct: 163 ESSDALLKRTMNIKENKAMLAQLLAELNSMPDFFPVRTPTSASRKKTVRRAFSEGQITRR 222 Query: 429 MASFHER--PIIFALSNPTSKAECTAEKCY----RVTEG--------RGIFASGSPFKSV 474 M P FAL N T A AE+ Y R T G R +S P + + Sbjct: 223 MNPTRSARPPEKFALENFTVSAAKFAEEFYSFRRRKTIGGKCREYRRRHRISSFRPVEDI 282 Query: 475 TLED 478 T ED Sbjct: 283 TEED 286 >gi|188497635 cell division cycle associated 7-like isoform 2 [Homo sapiens] Length = 420 Score = 32.7 bits (73), Expect = 0.99 Identities = 37/124 (29%), Positives = 53/124 (42%), Gaps = 15/124 (12%) Query: 370 DSKGLIVKGRSHLNHEKEMFAQDHPEVNSLEEVVRLVKPTAIIGVAAIAGAFTE-QILRD 428 +S ++K ++ K M AQ E+NS+ + + PT+ + AF+E QI R Sbjct: 175 ESSDALLKRTMNIKENKAMLAQLLAELNSMPDFFPVRTPTSASRKKTVRRAFSEGQITRR 234 Query: 429 MASFHER--PIIFALSNPTSKAECTAEKCY----RVTEG--------RGIFASGSPFKSV 474 M P FAL N T A AE+ Y R T G R +S P + + Sbjct: 235 MNPTRSARPPEKFALENFTVSAAKFAEEFYSFRRRKTIGGKCREYRRRHRISSFRPVEDI 294 Query: 475 TLED 478 T ED Sbjct: 295 TEED 298 >gi|31542537 cell division cycle associated 7-like isoform 1 [Homo sapiens] Length = 454 Score = 32.7 bits (73), Expect = 0.99 Identities = 37/124 (29%), Positives = 53/124 (42%), Gaps = 15/124 (12%) Query: 370 DSKGLIVKGRSHLNHEKEMFAQDHPEVNSLEEVVRLVKPTAIIGVAAIAGAFTE-QILRD 428 +S ++K ++ K M AQ E+NS+ + + PT+ + AF+E QI R Sbjct: 209 ESSDALLKRTMNIKENKAMLAQLLAELNSMPDFFPVRTPTSASRKKTVRRAFSEGQITRR 268 Query: 429 MASFHER--PIIFALSNPTSKAECTAEKCY----RVTEG--------RGIFASGSPFKSV 474 M P FAL N T A AE+ Y R T G R +S P + + Sbjct: 269 MNPTRSARPPEKFALENFTVSAAKFAEEFYSFRRRKTIGGKCREYRRRHRISSFRPVEDI 328 Query: 475 TLED 478 T ED Sbjct: 329 TEED 332 >gi|239756897 PREDICTED: similar to hCG1994130 [Homo sapiens] Length = 388 Score = 31.2 bits (69), Expect = 2.9 Identities = 18/39 (46%), Positives = 20/39 (51%), Gaps = 7/39 (17%) Query: 16 GRACGALP------RWTPTAPAQGCHSKPGPARPVPLKK 48 G A GA P R P APA C PGP RP+P K+ Sbjct: 144 GEAPGACPPPFEPERLHPAAPAV-CDDSPGPGRPLPAKR 181 >gi|239751393 PREDICTED: hypothetical protein XP_002347835 [Homo sapiens] Length = 388 Score = 31.2 bits (69), Expect = 2.9 Identities = 18/39 (46%), Positives = 20/39 (51%), Gaps = 7/39 (17%) Query: 16 GRACGALP------RWTPTAPAQGCHSKPGPARPVPLKK 48 G A GA P R P APA C PGP RP+P K+ Sbjct: 144 GEAPGACPPPFEPERLHPAAPAV-CDDSPGPGRPLPAKR 181 >gi|239745900 PREDICTED: hypothetical protein XP_002343613 [Homo sapiens] Length = 388 Score = 31.2 bits (69), Expect = 2.9 Identities = 18/39 (46%), Positives = 20/39 (51%), Gaps = 7/39 (17%) Query: 16 GRACGALP------RWTPTAPAQGCHSKPGPARPVPLKK 48 G A GA P R P APA C PGP RP+P K+ Sbjct: 144 GEAPGACPPPFEPERLHPAAPAV-CDDSPGPGRPLPAKR 181 >gi|93277088 mediator of RNA polymerase II transcription, subunit 12 homolog (S. cerevisiae)-like [Homo sapiens] Length = 2145 Score = 30.4 bits (67), Expect = 4.9 Identities = 20/65 (30%), Positives = 36/65 (55%), Gaps = 3/65 (4%) Query: 522 QEVSEQHLSQGRLYP-PLSTIRDVSLRIAIKVLDYAYKHNLASY--YPEPKDKEAFVRSL 578 Q+VS L +G+ P PLS ++R+ +V+ Y +H+L Y +P PK + +++ L Sbjct: 1669 QKVSPWDLFEGQKNPAPLSWAWFGTVRVDRRVIKYEEQHHLLLYHTHPMPKPRSYYLQPL 1728 Query: 579 VYTPD 583 P+ Sbjct: 1729 PLPPE 1733 >gi|33286436 gametogenetin [Homo sapiens] Length = 652 Score = 30.4 bits (67), Expect = 4.9 Identities = 19/46 (41%), Positives = 21/46 (45%), Gaps = 7/46 (15%) Query: 2 GAALGTGTRLAPWPGRACGAL--PRWTPTAPAQGCHSKPGPARPVP 45 GA G G P R AL P +P P + HS PGP RP P Sbjct: 368 GAGGGIGA-----PRRRAAALSGPWGSPPPPPEQIHSAPGPRRPAP 408 >gi|19913432 ATPase, H+ transporting, lysosomal, V0 subunit d1 [Homo sapiens] Length = 351 Score = 30.0 bits (66), Expect = 6.4 Identities = 16/57 (28%), Positives = 27/57 (47%), Gaps = 2/57 (3%) Query: 513 FLLTAEQIAQEVSEQHLSQGRLYPPLSTIRDVSLRIAIKVLDYAYKHNLASYYPEPK 569 F++T E+S++ + +L+P + L + DY N+A YYPE K Sbjct: 221 FIITINSFGTELSKE--DRAKLFPHCGRLYPEGLAQLARADDYEQVKNVADYYPEYK 275 Database: hs.faa Posted date: Aug 4, 2009 4:42 PM Number of letters in database: 18,247,518 Number of sequences in database: 37,866 Lambda K H 0.322 0.139 0.420 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 23,396,665 Number of Sequences: 37866 Number of extensions: 1123968 Number of successful extensions: 2628 Number of sequences better than 10.0: 14 Number of HSP's better than 10.0 without gapping: 5 Number of HSP's successfully gapped in prelim test: 9 Number of HSP's that attempted gapping in prelim test: 2618 Number of HSP's gapped (non-prelim): 18 length of query: 604 length of database: 18,247,518 effective HSP length: 108 effective length of query: 496 effective length of database: 14,157,990 effective search space: 7022363040 effective search space used: 7022363040 T: 11 A: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.9 bits) S2: 65 (29.6 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.