Guide to the Human Genome
Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help

Search of human proteins with 11612655

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|11612655 FXYD domain-containing ion transport regulator 6
[Homo sapiens]
         (95 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|11612655 FXYD domain-containing ion transport regulator 6 [Ho...   189   4e-49
gi|169194724 PREDICTED: similar to FXYD domain-containing ion tr...   154   1e-38
gi|169194767 PREDICTED: similar to FXYD domain-containing ion tr...   154   1e-38
gi|169190389 PREDICTED: similar to FXYD domain-containing ion tr...   154   1e-38
gi|11612672 phospholemman precursor [Homo sapiens]                     79   6e-16
gi|11612670 phospholemman precursor [Homo sapiens]                     79   6e-16
gi|11125766 FXYD domain-containing ion transport regulator 2 iso...    62   1e-10
gi|11125764 FXYD domain-containing ion transport regulator 2 iso...    62   1e-10
gi|209862817 FXYD domain containing ion transport regulator 3 is...    61   2e-10
gi|209862809 FXYD domain containing ion transport regulator 3 is...    61   2e-10
gi|5174635 FXYD domain containing ion transport regulator 3 isof...    61   2e-10
gi|27764904 FXYD domain containing ion transport regulator 4 [Ho...    51   2e-07
gi|11612659 FXYD domain-containing ion transport regulator 7 [Ho...    49   1e-06
gi|209862819 FXYD domain containing ion transport regulator 3 is...    47   3e-06
gi|11612674 FXYD domain containing ion transport regulator 3 iso...    47   3e-06
gi|209862811 FXYD domain containing ion transport regulator 3 is...    46   6e-06
gi|47778938 FXYD domain-containing ion transport regulator 5 [Ho...    42   1e-04
gi|21618361 FXYD domain-containing ion transport regulator 5 [Ho...    42   1e-04
gi|188595665 FXYD domain-containing ion transport regulator 2 is...    37   0.004
gi|114326453 a disintegrin and metalloproteinase domain 7 [Homo ...    28   1.6  

>gi|11612655 FXYD domain-containing ion transport regulator 6
          [Homo sapiens]
          Length = 95

 Score =  189 bits (480), Expect = 4e-49
 Identities = 95/95 (100%), Positives = 95/95 (100%)

Query: 1  MELVLVFLCSLLAPMVLASAAEKEKEMDPFHYDYQTLRIGGLVFAVVLFSVGILLILSRR 60
          MELVLVFLCSLLAPMVLASAAEKEKEMDPFHYDYQTLRIGGLVFAVVLFSVGILLILSRR
Sbjct: 1  MELVLVFLCSLLAPMVLASAAEKEKEMDPFHYDYQTLRIGGLVFAVVLFSVGILLILSRR 60

Query: 61 CKCSFNQKPRAPGDEEAQVENLITANATEPQKAEN 95
          CKCSFNQKPRAPGDEEAQVENLITANATEPQKAEN
Sbjct: 61 CKCSFNQKPRAPGDEEAQVENLITANATEPQKAEN 95


>gi|169194724 PREDICTED: similar to FXYD domain-containing ion
          transport regulator 6 [Homo sapiens]
          Length = 95

 Score =  154 bits (389), Expect = 1e-38
 Identities = 76/95 (80%), Positives = 86/95 (90%)

Query: 1  MELVLVFLCSLLAPMVLASAAEKEKEMDPFHYDYQTLRIGGLVFAVVLFSVGILLILSRR 60
          ME+VL+FLCSLLA +VLA A E+EK++DPFHYDYQTLRI GLV AVVLFS+GILLIL  R
Sbjct: 1  MEVVLIFLCSLLAHIVLADAVEREKQIDPFHYDYQTLRIRGLVCAVVLFSIGILLILGCR 60

Query: 61 CKCSFNQKPRAPGDEEAQVENLITANATEPQKAEN 95
          CKCSFNQKPR PG+EEAQVENLITANAT+ QKAE+
Sbjct: 61 CKCSFNQKPRTPGEEEAQVENLITANATKLQKAES 95


>gi|169194767 PREDICTED: similar to FXYD domain-containing ion
          transport regulator 6 [Homo sapiens]
          Length = 95

 Score =  154 bits (389), Expect = 1e-38
 Identities = 76/95 (80%), Positives = 86/95 (90%)

Query: 1  MELVLVFLCSLLAPMVLASAAEKEKEMDPFHYDYQTLRIGGLVFAVVLFSVGILLILSRR 60
          ME+VL+FLCSLLA +VLA A E+EK++DPFHYDYQTLRI GLV AVVLFS+GILLIL  R
Sbjct: 1  MEVVLIFLCSLLAHIVLADAVEREKQIDPFHYDYQTLRIRGLVCAVVLFSIGILLILGCR 60

Query: 61 CKCSFNQKPRAPGDEEAQVENLITANATEPQKAEN 95
          CKCSFNQKPR PG+EEAQVENLITANAT+ QKAE+
Sbjct: 61 CKCSFNQKPRTPGEEEAQVENLITANATKLQKAES 95


>gi|169190389 PREDICTED: similar to FXYD domain-containing ion
          transport regulator 6 [Homo sapiens]
          Length = 95

 Score =  154 bits (389), Expect = 1e-38
 Identities = 76/95 (80%), Positives = 86/95 (90%)

Query: 1  MELVLVFLCSLLAPMVLASAAEKEKEMDPFHYDYQTLRIGGLVFAVVLFSVGILLILSRR 60
          ME+VL+FLCSLLA +VLA A E+EK++DPFHYDYQTLRI GLV AVVLFS+GILLIL  R
Sbjct: 1  MEVVLIFLCSLLAHIVLADAVEREKQIDPFHYDYQTLRIRGLVCAVVLFSIGILLILGCR 60

Query: 61 CKCSFNQKPRAPGDEEAQVENLITANATEPQKAEN 95
          CKCSFNQKPR PG+EEAQVENLITANAT+ QKAE+
Sbjct: 61 CKCSFNQKPRTPGEEEAQVENLITANATKLQKAES 95


>gi|11612672 phospholemman precursor [Homo sapiens]
          Length = 92

 Score = 79.3 bits (194), Expect = 6e-16
 Identities = 43/87 (49%), Positives = 56/87 (64%), Gaps = 6/87 (6%)

Query: 4  VLVFLCSLLAPMVLASAAEKEKEMDPFHYDYQTLRIGGLVFAVVLFSVGILLILSRRCKC 63
          +LVF   LL      + AE  KE DPF YDYQ+L+IGGLV A +LF +GIL++LSRRC+C
Sbjct: 7  ILVFCVGLLT----MAKAESPKEHDPFTYDYQSLQIGGLVIAGILFILGILIVLSRRCRC 62

Query: 64 SFNQKPRA--PGDEEAQVENLITANAT 88
           FNQ+ R   P +EE    + I   +T
Sbjct: 63 KFNQQQRTGEPDEEEGTFRSSIRRLST 89


>gi|11612670 phospholemman precursor [Homo sapiens]
          Length = 92

 Score = 79.3 bits (194), Expect = 6e-16
 Identities = 43/87 (49%), Positives = 56/87 (64%), Gaps = 6/87 (6%)

Query: 4  VLVFLCSLLAPMVLASAAEKEKEMDPFHYDYQTLRIGGLVFAVVLFSVGILLILSRRCKC 63
          +LVF   LL      + AE  KE DPF YDYQ+L+IGGLV A +LF +GIL++LSRRC+C
Sbjct: 7  ILVFCVGLLT----MAKAESPKEHDPFTYDYQSLQIGGLVIAGILFILGILIVLSRRCRC 62

Query: 64 SFNQKPRA--PGDEEAQVENLITANAT 88
           FNQ+ R   P +EE    + I   +T
Sbjct: 63 KFNQQQRTGEPDEEEGTFRSSIRRLST 89


>gi|11125766 FXYD domain-containing ion transport regulator 2
          isoform 1 [Homo sapiens]
          Length = 66

 Score = 61.6 bits (148), Expect = 1e-10
 Identities = 26/51 (50%), Positives = 40/51 (78%)

Query: 26 EMDPFHYDYQTLRIGGLVFAVVLFSVGILLILSRRCKCSFNQKPRAPGDEE 76
          ++DPF+YDY+T+R GGL+FA + F VG+L++LSRR +C  N+K R   ++E
Sbjct: 15 DVDPFYYDYETVRNGGLIFAGLAFIVGLLILLSRRFRCGGNKKRRQINEDE 65


>gi|11125764 FXYD domain-containing ion transport regulator 2
          isoform 2 [Homo sapiens]
          Length = 64

 Score = 61.6 bits (148), Expect = 1e-10
 Identities = 26/51 (50%), Positives = 40/51 (78%)

Query: 26 EMDPFHYDYQTLRIGGLVFAVVLFSVGILLILSRRCKCSFNQKPRAPGDEE 76
          ++DPF+YDY+T+R GGL+FA + F VG+L++LSRR +C  N+K R   ++E
Sbjct: 13 DVDPFYYDYETVRNGGLIFAGLAFIVGLLILLSRRFRCGGNKKRRQINEDE 63


>gi|209862817 FXYD domain containing ion transport regulator 3
          isoform 1 precursor [Homo sapiens]
          Length = 87

 Score = 61.2 bits (147), Expect = 2e-10
 Identities = 31/89 (34%), Positives = 52/89 (58%), Gaps = 3/89 (3%)

Query: 1  MELVLVFLCSLLAPMVLASAAEKEKEMDPFHYDYQTLRIGGLVFAVVLFSVGILLILSRR 60
          M+ V + L   LA   +  A + E +  PF+YD+ +L++GGL+ A VL ++GI++++S +
Sbjct: 1  MQKVTLGLLVFLAGFPVLDANDLEDKNSPFYYDWHSLQVGGLICAGVLCAMGIIIVMSAK 60

Query: 61 CKCSFNQKPRAPGDEEAQVENLITANATE 89
          CKC F QK    G    +   LIT  + +
Sbjct: 61 CKCKFGQK---SGHHPGETPPLITPGSAQ 86


>gi|209862809 FXYD domain containing ion transport regulator 3
           isoform 3 [Homo sapiens]
          Length = 144

 Score = 61.2 bits (147), Expect = 2e-10
 Identities = 31/89 (34%), Positives = 52/89 (58%), Gaps = 3/89 (3%)

Query: 1   MELVLVFLCSLLAPMVLASAAEKEKEMDPFHYDYQTLRIGGLVFAVVLFSVGILLILSRR 60
           M+ V + L   LA   +  A + E +  PF+YD+ +L++GGL+ A VL ++GI++++S +
Sbjct: 58  MQKVTLGLLVFLAGFPVLDANDLEDKNSPFYYDWHSLQVGGLICAGVLCAMGIIIVMSAK 117

Query: 61  CKCSFNQKPRAPGDEEAQVENLITANATE 89
           CKC F QK    G    +   LIT  + +
Sbjct: 118 CKCKFGQK---SGHHPGETPPLITPGSAQ 143


>gi|5174635 FXYD domain containing ion transport regulator 3
          isoform 1 precursor [Homo sapiens]
          Length = 87

 Score = 61.2 bits (147), Expect = 2e-10
 Identities = 31/89 (34%), Positives = 52/89 (58%), Gaps = 3/89 (3%)

Query: 1  MELVLVFLCSLLAPMVLASAAEKEKEMDPFHYDYQTLRIGGLVFAVVLFSVGILLILSRR 60
          M+ V + L   LA   +  A + E +  PF+YD+ +L++GGL+ A VL ++GI++++S +
Sbjct: 1  MQKVTLGLLVFLAGFPVLDANDLEDKNSPFYYDWHSLQVGGLICAGVLCAMGIIIVMSAK 60

Query: 61 CKCSFNQKPRAPGDEEAQVENLITANATE 89
          CKC F QK    G    +   LIT  + +
Sbjct: 61 CKCKFGQK---SGHHPGETPPLITPGSAQ 86


>gi|27764904 FXYD domain containing ion transport regulator 4
          [Homo sapiens]
          Length = 89

 Score = 51.2 bits (121), Expect = 2e-07
 Identities = 28/75 (37%), Positives = 42/75 (56%), Gaps = 3/75 (4%)

Query: 3  LVLVFLCSLLAPMVLASAAEKEKEMDPFHYDYQTLRIGGLVFAVVLFSVGILLILSRRCK 62
          L L+ L  L A       A K+   DPF+YD++ L++ GL+   +L   GI  +LS +CK
Sbjct: 6  LALLLLAGLTALEANDPFANKD---DPFYYDWKNLQLSGLICGGLLAIAGIAAVLSGKCK 62

Query: 63 CSFNQKPRAPGDEEA 77
          C  +QK  +P  E+A
Sbjct: 63 CKSSQKQHSPVPEKA 77


>gi|11612659 FXYD domain-containing ion transport regulator 7
          [Homo sapiens]
          Length = 80

 Score = 48.5 bits (114), Expect = 1e-06
 Identities = 18/39 (46%), Positives = 30/39 (76%)

Query: 25 KEMDPFHYDYQTLRIGGLVFAVVLFSVGILLILSRRCKC 63
          +E DPF+YDY T++  G+  A +LF +GIL+++S++ KC
Sbjct: 13 EEPDPFYYDYNTVQTVGMTLATILFLLGILIVISKKVKC 51


>gi|209862819 FXYD domain containing ion transport regulator 3
           isoform 2 precursor [Homo sapiens]
          Length = 113

 Score = 47.4 bits (111), Expect = 3e-06
 Identities = 31/115 (26%), Positives = 52/115 (45%), Gaps = 29/115 (25%)

Query: 1   MELVLVFLCSLLAPMVLASAAEKEKEMDPFHYDYQTLRIGGLVFAVVLFSVGILLILSR- 59
           M+ V + L   LA   +  A + E +  PF+YD+ +L++GGL+ A VL ++GI++++S  
Sbjct: 1   MQKVTLGLLVFLAGFPVLDANDLEDKNSPFYYDWHSLQVGGLICAGVLCAMGIIIVMSEW 60

Query: 60  -------------------------RCKCSFNQKPRAPGDEEAQVENLITANATE 89
                                    +CKC F QK    G    +   LIT  + +
Sbjct: 61  RSSGEQAGRGWGSPPLTTQLSPTGAKCKCKFGQK---SGHHPGETPPLITPGSAQ 112


>gi|11612674 FXYD domain containing ion transport regulator 3
           isoform 2 precursor [Homo sapiens]
          Length = 113

 Score = 47.4 bits (111), Expect = 3e-06
 Identities = 31/115 (26%), Positives = 52/115 (45%), Gaps = 29/115 (25%)

Query: 1   MELVLVFLCSLLAPMVLASAAEKEKEMDPFHYDYQTLRIGGLVFAVVLFSVGILLILSR- 59
           M+ V + L   LA   +  A + E +  PF+YD+ +L++GGL+ A VL ++GI++++S  
Sbjct: 1   MQKVTLGLLVFLAGFPVLDANDLEDKNSPFYYDWHSLQVGGLICAGVLCAMGIIIVMSEW 60

Query: 60  -------------------------RCKCSFNQKPRAPGDEEAQVENLITANATE 89
                                    +CKC F QK    G    +   LIT  + +
Sbjct: 61  RSSGEQAGRGWGSPPLTTQLSPTGAKCKCKFGQK---SGHHPGETPPLITPGSAQ 112


>gi|209862811 FXYD domain containing ion transport regulator 3
          isoform4 precursor [Homo sapiens]
          Length = 96

 Score = 46.2 bits (108), Expect = 6e-06
 Identities = 27/94 (28%), Positives = 45/94 (47%), Gaps = 26/94 (27%)

Query: 1  MELVLVFLCSLLAPMVLASAAEKEKEMDPFHYDYQTLRIGGLVFAVVLFSVGILLILSR- 59
          M+ V + L   LA   +  A + E +  PF+YD+ +L++GGL+ A VL ++GI++++S  
Sbjct: 1  MQKVTLGLLVFLAGFPVLDANDLEDKNSPFYYDWHSLQVGGLICAGVLCAMGIIIVMSEW 60

Query: 60 -------------------------RCKCSFNQK 68
                                   +CKC F QK
Sbjct: 61 RSSGEQAGRGWGSPPLTTQLSPTGAKCKCKFGQK 94


>gi|47778938 FXYD domain-containing ion transport regulator 5 [Homo
           sapiens]
          Length = 178

 Score = 41.6 bits (96), Expect = 1e-04
 Identities = 19/37 (51%), Positives = 25/37 (67%)

Query: 26  EMDPFHYDYQTLRIGGLVFAVVLFSVGILLILSRRCK 62
           E DPF YD  TLR  GL+ A VLF  GI+++ S +C+
Sbjct: 131 EDDPFFYDEHTLRKRGLLVAAVLFITGIIILTSGKCR 167


>gi|21618361 FXYD domain-containing ion transport regulator 5 [Homo
           sapiens]
          Length = 178

 Score = 41.6 bits (96), Expect = 1e-04
 Identities = 19/37 (51%), Positives = 25/37 (67%)

Query: 26  EMDPFHYDYQTLRIGGLVFAVVLFSVGILLILSRRCK 62
           E DPF YD  TLR  GL+ A VLF  GI+++ S +C+
Sbjct: 131 EDDPFFYDEHTLRKRGLLVAAVLFITGIIILTSGKCR 167


>gi|188595665 FXYD domain-containing ion transport regulator 2
           isoform 3 [Homo sapiens]
          Length = 145

 Score = 36.6 bits (83), Expect = 0.004
 Identities = 15/27 (55%), Positives = 23/27 (85%)

Query: 33  DYQTLRIGGLVFAVVLFSVGILLILSR 59
           DY+T+R GGL+FA + F VG+L++LS+
Sbjct: 88  DYETVRNGGLIFAGLAFIVGLLILLSK 114


>gi|114326453 a disintegrin and metalloproteinase domain 7 [Homo
           sapiens]
          Length = 754

 Score = 28.1 bits (61), Expect = 1.6
 Identities = 13/40 (32%), Positives = 24/40 (60%)

Query: 42  LVFAVVLFSVGILLILSRRCKCSFNQKPRAPGDEEAQVEN 81
           +V  +V+  +G+L++L R  KC   ++ ++P  E   VEN
Sbjct: 674 VVLVLVIVGIGVLILLVRYRKCIKLKQVQSPPTETLGVEN 713


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.322    0.136    0.389 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 3,497,120
Number of Sequences: 37866
Number of extensions: 114005
Number of successful extensions: 303
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 279
Number of HSP's gapped (non-prelim): 21
length of query: 95
length of database: 18,247,518
effective HSP length: 66
effective length of query: 29
effective length of database: 15,748,362
effective search space: 456702498
effective search space used: 456702498
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 55 (25.8 bits)

Search results were obtained with NCBI BLAST and RefSeq entries.


Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help

Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

CSHL Press