Guide to the Human Genome
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Name: PAPL Sequence: fasta or formatted (438aa) NCBI GI: 228008321
Description:

iron/zinc purple acid phosphatase-like protein

Referenced in:

Additional Enzymes and Related Sequences
Phosphatases and Sulfatases

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.7         25           2
 C cysteine            1.6          7           1
 D aspartate           5.0         22           2
 E glutamate           3.9         17           2
 F phenylalanine       4.6         20           2
 G glycine             8.7         38           2
 H histidine           3.9         17           1
 I isoleucine          3.2         14           2
 K lysine              3.0         13           1
 L leucine             9.8         43           4
 M methionine          2.3         10           1
 N asparagine          3.4         15           1
 P proline             6.8         30           1
 Q glutamine           4.3         19           2
 R arginine            8.7         38           2
 S serine              5.7         25           1
 T threonine           3.9         17           2
 V valine              6.8         30           2
 W tryptophan          3.0         13           1
 Y tyrosine            5.7         25           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   iron/zinc purple acid phosphatase-like protein [Hom... 
ZNF717                0.010   zinc finger protein 717 
LOC100287163          0.008   PREDICTED: hypothetical protein XP_002343923 
FAM186A               0.007   family with sequence similarity 186, member A [Homo...
AKD1                  0.007   adenylate kinase domain containing 1 isoform 1 [Hom...
LOC100289242          0.007   PREDICTED: hypothetical protein XP_002342243 
SLC30A5               0.006   solute carrier family 30 (zinc transporter), member ...
IL12RB2               0.004   interleukin 12 receptor, beta 2 precursor 
ATRNL1                0.004   attractin-like 1 
ZSWIM5                0.004   zinc finger, SWIM domain containing 5 
LOC100287933          0.004   PREDICTED: hypothetical protein XP_002343257 
BIN1                  0.004   bridging integrator 1 isoform 2 
BIN1                  0.004   bridging integrator 1 isoform 1 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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