Guide to the Human Genome
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Name: GAN Sequence: fasta or formatted (597aa) NCBI GI: 11545731
Description:

gigaxonin

Referenced in:

Kelch Family

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.9         41           3
 C cysteine            3.2         19           2
 D aspartate           5.2         31           2
 E glutamate           8.2         49           2
 F phenylalanine       3.7         22           1
 G glycine             6.7         40           3
 H histidine           2.5         15           2
 I isoleucine          6.0         36           1
 K lysine              4.9         29           3
 L leucine             9.9         59           4
 M methionine          3.0         18           1
 N asparagine          3.4         20           1
 P proline             4.4         26           2
 Q glutamine           3.5         21           2
 R arginine            6.0         36           2
 S serine              6.5         39           3
 T threonine           4.4         26           1
 V valine              6.0         36           2
 W tryptophan          1.3          8           1
 Y tyrosine            4.4         26           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   gigaxonin 
KLHL2                 0.181   kelch-like 2, Mayven isoform 2 
KLHL2                 0.181   kelch-like 2, Mayven isoform 1 
KLHL3                 0.169   kelch-like 3 
KLHL5                 0.166   kelch-like 5 isoform 3 
KLHL5                 0.166   kelch-like 5 isoform 1 
KLHL28                0.164   BTB (POZ) domain containing 5 
KLHL4                 0.161   kelch-like 4 isoform 1 
KLHL2                 0.160   kelch-like 2, Mayven isoform 3 
KLHL4                 0.160   kelch-like 4 isoform 2 
KLHL1                 0.158   kelch-like 1 protein 
KLHL17                0.156   kelch-like 17 
KLHL12                0.153   kelch-like 12 
KLHL20                0.152   kelch-like 20 
KLHL5                 0.151   kelch-like 5 isoform 2 
KLHL18                0.151   kelch-like 18 
IPP                   0.145   intracisternal A particle-promoted polypeptide isofor...
IPP                   0.145   intracisternal A particle-promoted polypeptide isof...
KLHL10                0.142   kelch-like 10 
KLHL24                0.142   DRE1 protein 
KLHL31                0.135   kelch repeat and BTB (POZ) domain containing 1 [Homo...
KLHL9                 0.135   kelch-like 9 
KEAP1                 0.131   kelch-like ECH-associated protein 1 
KEAP1                 0.131   kelch-like ECH-associated protein 1 
KLHL13                0.131   kelch-like 13 
KLHL25                0.126   BTB/POZ KELCH domain protein 
KLHL26                0.125   kelch-like 26 
KLHL8                 0.125   kelch-like 8 
KLHL7                 0.123   kelch-like 7 isoform 1 
KLHL6                 0.122   kelch-like 6 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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