Search of human proteins with 115430112

Search of human proteins with 115430112

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|115430112 receptor accessory protein 5 [Homo sapiens]
         (189 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|115430112 receptor accessory protein 5 [Homo sapiens]              385   e-107
gi|19923919 receptor accessory protein 6 [Homo sapiens]               230   5e-61
gi|20149695 receptor accessory protein 4 [Homo sapiens]               104   4e-23
gi|42476206 receptor accessory protein 2 [Homo sapiens]               100   1e-21
gi|12597657 receptor accessory protein 1 [Homo sapiens]                98   4e-21
gi|47679089 receptor accessory protein 3 [Homo sapiens]                91   8e-19
gi|5803221 WD repeat-containing protein 3 [Homo sapiens]               28   3.6  
gi|116008154 hypothetical protein LOC201229 [Homo sapiens]             28   4.7  
gi|29540543 sulfotransferase family, cytosolic, 1A, phenol-prefe...    28   6.1  
gi|6005701 ATP-binding cassette, sub-family A member 8 [Homo sap...    28   6.1  
gi|9790233 solute carrier organic anion transporter family, memb...    28   6.1  
gi|7662270 synaptic vesicle protein 2B homolog [Homo sapiens]          27   8.0  
gi|4501957 alpha-1D-adrenergic receptor [Homo sapiens]                 27   8.0  
gi|28416953 acyl-CoA synthetase short-chain family member 1 [Hom...    27   8.0  

>gi|115430112 receptor accessory protein 5 [Homo sapiens]
          Length = 189

 Score =  385 bits (988), Expect = e-107
 Identities = 189/189 (100%), Positives = 189/189 (100%)

Query: 1   MSAAMRERFDRFLHEKNCMTDLLAKLEAKTGVNRSFIALGVIGLVALYLVFGYGASLLCN 60
           MSAAMRERFDRFLHEKNCMTDLLAKLEAKTGVNRSFIALGVIGLVALYLVFGYGASLLCN
Sbjct: 1   MSAAMRERFDRFLHEKNCMTDLLAKLEAKTGVNRSFIALGVIGLVALYLVFGYGASLLCN 60

Query: 61  LIGFGYPAYISIKAIESPNKEDDTQWLTYWVVYGVFSIAEFFSDIFLSWFPFYYMLKCGF 120
           LIGFGYPAYISIKAIESPNKEDDTQWLTYWVVYGVFSIAEFFSDIFLSWFPFYYMLKCGF
Sbjct: 61  LIGFGYPAYISIKAIESPNKEDDTQWLTYWVVYGVFSIAEFFSDIFLSWFPFYYMLKCGF 120

Query: 121 LLWCMAPSPSNGAELLYKRIIRPFFLKHESQMDSVVKDLKDKAKETADAITKEAKKATVN 180
           LLWCMAPSPSNGAELLYKRIIRPFFLKHESQMDSVVKDLKDKAKETADAITKEAKKATVN
Sbjct: 121 LLWCMAPSPSNGAELLYKRIIRPFFLKHESQMDSVVKDLKDKAKETADAITKEAKKATVN 180

Query: 181 LLGEEKKST 189
           LLGEEKKST
Sbjct: 181 LLGEEKKST 189


>gi|19923919 receptor accessory protein 6 [Homo sapiens]
          Length = 184

 Score =  230 bits (587), Expect = 5e-61
 Identities = 102/171 (59%), Positives = 135/171 (78%)

Query: 5   MRERFDRFLHEKNCMTDLLAKLEAKTGVNRSFIALGVIGLVALYLVFGYGASLLCNLIGF 64
           +R+R + FL ++N +T++L  LEAKTGV + ++A G + L++LYL+FGYGASLLCNLIGF
Sbjct: 4   LRQRVEHFLEQRNLVTEVLGALEAKTGVEKRYLAAGAVTLLSLYLLFGYGASLLCNLIGF 63

Query: 65  GYPAYISIKAIESPNKEDDTQWLTYWVVYGVFSIAEFFSDIFLSWFPFYYMLKCGFLLWC 124
            YPAY SIKAIESP+K+DDT WLTYWVVY +F +AEFFSD+ LSWFPFYY+ KC FLL+C
Sbjct: 64  VYPAYASIKAIESPSKDDDTVWLTYWVVYALFGLAEFFSDLLLSWFPFYYVGKCAFLLFC 123

Query: 125 MAPSPSNGAELLYKRIIRPFFLKHESQMDSVVKDLKDKAKETADAITKEAK 175
           MAP P NGA +LY+R++RP FL+H   +D ++ DL  +A + A  IT+  K
Sbjct: 124 MAPRPWNGALMLYQRVVRPLFLRHHGAVDRIMNDLSGRALDAAAGITRNVK 174


>gi|20149695 receptor accessory protein 4 [Homo sapiens]
          Length = 257

 Score =  104 bits (260), Expect = 4e-23
 Identities = 44/114 (38%), Positives = 74/114 (64%), Gaps = 5/114 (4%)

Query: 57  LLCNLI----GFGYPAYISIKAIESPNKEDDTQWLTYWVVYGVFSIAEFFSDIFLSWFPF 112
           ++C L+    G   PAY S KA+++ N  +  +W+ YW+V+ +F  AE  +DIF+SWFPF
Sbjct: 5   MICRLVVLVFGMLCPAYASYKAVKTKNIREYVRWMMYWIVFALFMAAEIVTDIFISWFPF 64

Query: 113 YYMLKCGFLLWCMAPSPSNGAELLYKRIIRPFFLKHESQMDSVVKDLKDKAKET 166
           YY +K  F+LW ++P  + GA LLY++ + P   +HE ++D+ +   K+++ ET
Sbjct: 65  YYEIKMAFVLWLLSPY-TKGASLLYRKFVHPSLSRHEKEIDAYIVQAKERSYET 117


>gi|42476206 receptor accessory protein 2 [Homo sapiens]
          Length = 252

 Score = 99.8 bits (247), Expect = 1e-21
 Identities = 43/124 (34%), Positives = 73/124 (58%), Gaps = 1/124 (0%)

Query: 57  LLCNLIGFGYPAYISIKAIESPNKEDDTQWLTYWVVYGVFSIAEFFSDIFLSWFPFYYML 116
           L+  + G  YPAY S KA+++ N ++  +W+ YW+V+  F+ AE  +DI LSWFPFY+ L
Sbjct: 9   LVVLIFGTLYPAYSSYKAVKTKNVKEYVKWMMYWIVFAFFTTAETLTDIVLSWFPFYFEL 68

Query: 117 KCGFLLWCMAPSPSNGAELLYKRIIRPFFLKHESQMDSVVKDLKDKAKETADAITKEAKK 176
           K  F++W ++P  + G+ +LY++ + P     E ++D  +   +DK+ ET   + K    
Sbjct: 69  KIAFVIWLLSPY-TKGSSVLYRKFVHPTLSNKEKEIDEYITQARDKSYETMMRVGKRGLN 127

Query: 177 ATVN 180
              N
Sbjct: 128 LAAN 131


>gi|12597657 receptor accessory protein 1 [Homo sapiens]
          Length = 201

 Score = 98.2 bits (243), Expect = 4e-21
 Identities = 41/107 (38%), Positives = 69/107 (64%), Gaps = 1/107 (0%)

Query: 57  LLCNLIGFGYPAYISIKAIESPNKEDDTQWLTYWVVYGVFSIAEFFSDIFLSWFPFYYML 116
           L+  + G  YPAY S KA++S + ++  +W+ YW+++ +F+ AE F+DIFL WFPFYY L
Sbjct: 9   LVVLIFGTLYPAYYSYKAVKSKDIKEYVKWMMYWIIFALFTTAETFTDIFLCWFPFYYEL 68

Query: 117 KCGFLLWCMAPSPSNGAELLYKRIIRPFFLKHESQMDSVVKDLKDKA 163
           K  F+ W ++P  + G+ LLY++ + P     E ++D  +   KD++
Sbjct: 69  KIAFVAWLLSPY-TKGSSLLYRKFVHPTLSSKEKEIDDCLVQAKDRS 114


>gi|47679089 receptor accessory protein 3 [Homo sapiens]
          Length = 255

 Score = 90.5 bits (223), Expect = 8e-19
 Identities = 35/106 (33%), Positives = 66/106 (62%), Gaps = 1/106 (0%)

Query: 61  LIGFGYPAYISIKAIESPNKEDDTQWLTYWVVYGVFSIAEFFSDIFLSWFPFYYMLKCGF 120
           + G  YPAY S KA+++ N ++  +W+ YW+V+ ++++ E  +D  ++WFP YY LK  F
Sbjct: 13  VFGMLYPAYYSYKAVKTKNVKEYVRWMMYWIVFALYTVIETVADQTVAWFPLYYELKIAF 72

Query: 121 LLWCMAPSPSNGAELLYKRIIRPFFLKHESQMDSVVKDLKDKAKET 166
           ++W ++P  + GA L+Y++ + P     E ++D  +   K++  ET
Sbjct: 73  VIWLLSPY-TKGASLIYRKFLHPLLSSKEREIDDYIVQAKERGYET 117


>gi|5803221 WD repeat-containing protein 3 [Homo sapiens]
          Length = 943

 Score = 28.5 bits (62), Expect = 3.6
 Identities = 17/63 (26%), Positives = 29/63 (46%), Gaps = 9/63 (14%)

Query: 122 LWCMAPSPSNGAEL---------LYKRIIRPFFLKHESQMDSVVKDLKDKAKETADAITK 172
           +WC+A SPS    +         L++R   P  L+ E +M+   +  +  AKE   A+  
Sbjct: 678 IWCLAVSPSGDYVVSSSHDKSLRLWERTREPLILEEEREMEREAEYEESVAKEDQPAVPG 737

Query: 173 EAK 175
           E +
Sbjct: 738 ETQ 740


>gi|116008154 hypothetical protein LOC201229 [Homo sapiens]
          Length = 78

 Score = 28.1 bits (61), Expect = 4.7
 Identities = 17/58 (29%), Positives = 28/58 (48%), Gaps = 1/58 (1%)

Query: 120 FLLWCMAPSPSNGAELLYKRIIRPFFLKHESQMD-SVVKDLKDKAKETADAITKEAKK 176
           +LL C    P+ G +  YK  +R  F  H  + +   ++ +  +A E AD I  + KK
Sbjct: 19  YLLRCCQQLPTKGIQQHYKHAVRQSFRVHSDEDNPERIQQIIKRAIEDADWIMNKYKK 76


>gi|29540543 sulfotransferase family, cytosolic, 1A,
           phenol-preferring, member 1 isoform b [Homo sapiens]
          Length = 217

 Score = 27.7 bits (60), Expect = 6.1
 Identities = 13/32 (40%), Positives = 19/32 (59%), Gaps = 4/32 (12%)

Query: 86  WLTYWVVYGVFSIAEFFSDIFLSWFPFYYMLK 117
           W TY VVY    +A    D+ +S++ FY+M K
Sbjct: 42  WNTYMVVY----VARNAKDVAVSYYHFYHMAK 69


>gi|6005701 ATP-binding cassette, sub-family A member 8 [Homo sapiens]
          Length = 1581

 Score = 27.7 bits (60), Expect = 6.1
 Identities = 25/91 (27%), Positives = 39/91 (42%), Gaps = 16/91 (17%)

Query: 39   LGVIGLVALYLVFGYGASLLCNLIGFGYPAYISIKAIESPNKEDDTQWLTYWVVYGVFSI 98
            L +I ++ +    GY  SL+       +  Y+ I  I    +++   W   + V  VFS+
Sbjct: 1058 LTIIHIIQIPCAVGYSFSLI-------FMTYV-ISFIFRKGRKNSGIWSFCFYVVTVFSV 1109

Query: 99   AEFFSDIFLSWFPFYY--------MLKCGFL 121
            A F   IF S  PF +        M+ C FL
Sbjct: 1110 AGFAFSIFESDIPFIFTFLIPPATMIGCLFL 1140


>gi|9790233 solute carrier organic anion transporter family, member
           1B3 [Homo sapiens]
          Length = 702

 Score = 27.7 bits (60), Expect = 6.1
 Identities = 22/91 (24%), Positives = 42/91 (46%), Gaps = 10/91 (10%)

Query: 28  AKTGVNRSFI-ALGVIGLVALYLVFGYGASLLCNLIGFGYPAYISIKAIESPNKEDDTQW 86
           AK G +  ++ +L  IG++   + F  G+      +  GY    +I+     ++     W
Sbjct: 200 AKEGHSSLYLGSLNAIGMIGPVIGFALGSLFAKMYVDIGYVDLSTIRITPKDSRWVGAWW 259

Query: 87  LTYWVVYGVFSIAEFFSDIFLSWFPFYYMLK 117
           L + +V G+FSI        +S  PF+++ K
Sbjct: 260 LGF-LVSGLFSI--------ISSIPFFFLPK 281


>gi|7662270 synaptic vesicle protein 2B homolog [Homo sapiens]
          Length = 683

 Score = 27.3 bits (59), Expect = 8.0
 Identities = 25/88 (28%), Positives = 37/88 (42%), Gaps = 15/88 (17%)

Query: 26  LEAKTGVNRSFIALGVIGLVALYLVFGYGASLLCNLI-GFGYPAYISI------KAIESP 78
           L     VN SF +L          V GYGA L C LI G G    + I      + +   
Sbjct: 178 LSMSLAVNASFASLSSF-------VQGYGAFLFCRLISGIGIGGALPIVFAYFSEFLSRE 230

Query: 79  NKEDDTQWL-TYWVVYGVFSIAEFFSDI 105
            + +   WL  +W+  G+++ A  +S I
Sbjct: 231 KRGEHLSWLGIFWMTGGLYASAMAWSII 258


>gi|4501957 alpha-1D-adrenergic receptor [Homo sapiens]
          Length = 572

 Score = 27.3 bits (59), Expect = 8.0
 Identities = 19/75 (25%), Positives = 36/75 (48%), Gaps = 11/75 (14%)

Query: 54  GASLLCNLIGFGYPAYISIKAIESPNKEDDTQWLTYWVVYGVFSIAEFFSDIFLSWFPFY 113
           GA  + +  G  + + +S++ ++   ++   + L   +V GVF          L WFPF+
Sbjct: 317 GAHGMRSAKGHTFRSSLSVRLLKFSREKKAAKTLA--IVVGVF---------VLCWFPFF 365

Query: 114 YMLKCGFLLWCMAPS 128
           ++L  G L   + PS
Sbjct: 366 FVLPLGSLFPQLKPS 380


>gi|28416953 acyl-CoA synthetase short-chain family member 1 [Homo
           sapiens]
          Length = 689

 Score = 27.3 bits (59), Expect = 8.0
 Identities = 13/23 (56%), Positives = 16/23 (69%), Gaps = 1/23 (4%)

Query: 124 CMAPSPSN-GAELLYKRIIRPFF 145
           C+AP PS  GAE+L    +RPFF
Sbjct: 452 CIAPRPSEEGAEILPAMAMRPFF 474


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.324    0.138    0.424 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 6,555,644
Number of Sequences: 37866
Number of extensions: 265958
Number of successful extensions: 847
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 8
Number of HSP's that attempted gapping in prelim test: 838
Number of HSP's gapped (non-prelim): 14
length of query: 189
length of database: 18,247,518
effective HSP length: 96
effective length of query: 93
effective length of database: 14,612,382
effective search space: 1358951526
effective search space used: 1358951526
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.5 bits)
S2: 59 (27.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.