C1orf228 14898

Name: C1orf228	Sequence: fasta or formatted (440aa)		NCBI GI: 224500884
Description: hypothetical protein LOC339541		Not currently referenced in the text
Composition: Amino acid Percentage Count Longest homopolymer A alanine 8.2 36 4 C cysteine 1.6 7 1 D aspartate 3.4 15 1 E glutamate 8.4 37 2 F phenylalanine 2.7 12 1 G glycine 4.8 21 2 H histidine 1.8 8 1 I isoleucine 6.1 27 2 K lysine 6.1 27 2 L leucine 15.2 67 2 M methionine 2.7 12 1 N asparagine 3.0 13 1 P proline 2.5 11 1 Q glutamine 5.7 25 2 R arginine 3.6 16 1 S serine 8.9 39 2 T threonine 5.0 22 2 V valine 6.8 30 2 W tryptophan 0.2 1 1 Y tyrosine 3.2 14 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 hypothetical protein LOC339541 FREM1 0.011 FRAS1 related extracellular matrix 1 ZER1 0.010 zyg-11 homolog B (C. elegans)-like RGNEF 0.009 Rho-guanine nucleotide exchange factor TOR2A 0.007 torsin family 2, member A isoform a ULK1 0.007 Unc-51-like kinase 1 CD109 0.006 CD109 antigen isoform 3 precursor CD109 0.006 CD109 antigen isoform 2 precursor CD109 0.006 CD109 antigen isoform 1 precursor CDC27 0.006 cell division cycle protein 27 isoform 1 CDC27 0.006 cell division cycle protein 27 isoform 2 RYR1 0.006 skeletal muscle ryanodine receptor isoform 2 RYR1 0.006 skeletal muscle ryanodine receptor isoform 1 FER 0.006 fer (fps/fes related) tyrosine kinase ACTL8 0.005 actin-like 8 SLC9A11 0.005 solute carrier family 9, member 11 CAND2 0.005 TBP-interacting protein isoform 2 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.