Search of human proteins with 223555968

Search of human proteins with 223555968

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|223555968 integrator complex subunit 9 isoform 1 [Homo
sapiens]
         (658 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|223555968 integrator complex subunit 9 isoform 1 [Homo sapiens]   1337   0.0  
gi|223555970 integrator complex subunit 9 isoform 2 [Homo sapiens]   1279   0.0  
gi|7706427 cleavage and polyadenylation specific factor 3, 73kDa...    73   7e-13
gi|33300633 cleavage and polyadenylation specific factor 3-like ...    72   2e-12
gi|34101288 cleavage and polyadenylation specific factor 2 [Homo...    65   2e-10
gi|4506889 mitogen-activated protein kinase kinase 4 [Homo sapiens]    32   1.9  
gi|55741675 hypothetical protein LOC22889 [Homo sapiens]               32   1.9  
gi|239756207 PREDICTED: similar to pre-B lymphocyte gene 2 [Homo...    31   3.2  
gi|239750745 PREDICTED: hypothetical protein XP_002347495 [Homo ...    31   3.2  
gi|20986497 mitogen-activated protein kinase 7 isoform 1 [Homo s...    31   3.2  
gi|209529736 mitogen-activated protein kinase 7 isoform 1 [Homo ...    31   3.2  
gi|209529734 mitogen-activated protein kinase 7 isoform 1 [Homo ...    31   3.2  
gi|20986499 mitogen-activated protein kinase 7 isoform 2 [Homo s...    31   3.2  
gi|34740329 heterogeneous nuclear ribonucleoprotein A3 [Homo sap...    31   3.2  
gi|44888818 DIP2 disco-interacting protein 2 homolog C [Homo sap...    31   4.1  
gi|26638662 mutS homolog 5 isoform a [Homo sapiens]                    30   5.4  
gi|44955929 calmodulin regulated spectrin-associated protein 1-l...    30   5.4  
gi|239756276 PREDICTED: hypothetical protein [Homo sapiens]            30   7.1  
gi|194294554 SET binding protein 1 isoform a [Homo sapiens]            30   7.1  
gi|210032580 SET domain containing 1B [Homo sapiens]                   30   9.2  

>gi|223555968 integrator complex subunit 9 isoform 1 [Homo sapiens]
          Length = 658

 Score = 1337 bits (3459), Expect = 0.0
 Identities = 658/658 (100%), Positives = 658/658 (100%)

Query: 1   MKLYCLSGHPTLPCNVLKFKSTTIMLDCGLDMTSTLNFLPLPLVQSPRLSNLPGWSLKDG 60
           MKLYCLSGHPTLPCNVLKFKSTTIMLDCGLDMTSTLNFLPLPLVQSPRLSNLPGWSLKDG
Sbjct: 1   MKLYCLSGHPTLPCNVLKFKSTTIMLDCGLDMTSTLNFLPLPLVQSPRLSNLPGWSLKDG 60

Query: 61  NAFLDKELKECSGHVFVDSVPEFCLPETELIDLSTVDVILISNYHCMMALPYITEHTGFT 120
           NAFLDKELKECSGHVFVDSVPEFCLPETELIDLSTVDVILISNYHCMMALPYITEHTGFT
Sbjct: 61  NAFLDKELKECSGHVFVDSVPEFCLPETELIDLSTVDVILISNYHCMMALPYITEHTGFT 120

Query: 121 GTVYATEPTVQIGRLLMEELVNFIERVPKAQSASLWKNKDIQRLLPSPLKDAVEVSTWRR 180
           GTVYATEPTVQIGRLLMEELVNFIERVPKAQSASLWKNKDIQRLLPSPLKDAVEVSTWRR
Sbjct: 121 GTVYATEPTVQIGRLLMEELVNFIERVPKAQSASLWKNKDIQRLLPSPLKDAVEVSTWRR 180

Query: 181 CYTMQEVNSALSKIQLVGYSQKIELFGAVQVTPLSSGYALGSSNWIIQSHYEKVSYVSGS 240
           CYTMQEVNSALSKIQLVGYSQKIELFGAVQVTPLSSGYALGSSNWIIQSHYEKVSYVSGS
Sbjct: 181 CYTMQEVNSALSKIQLVGYSQKIELFGAVQVTPLSSGYALGSSNWIIQSHYEKVSYVSGS 240

Query: 241 SLLTTHPQPMDQASLKNSDVLVLTGLTQIPTANPDGMVGEFCSNLALTVRNGGNVLVPCY 300
           SLLTTHPQPMDQASLKNSDVLVLTGLTQIPTANPDGMVGEFCSNLALTVRNGGNVLVPCY
Sbjct: 241 SLLTTHPQPMDQASLKNSDVLVLTGLTQIPTANPDGMVGEFCSNLALTVRNGGNVLVPCY 300

Query: 301 PSGVIYDLLECLYQYIDSAGLSSVPLYFISPVANSSLEFSQIFAEWLCHNKQSKVYLPEP 360
           PSGVIYDLLECLYQYIDSAGLSSVPLYFISPVANSSLEFSQIFAEWLCHNKQSKVYLPEP
Sbjct: 301 PSGVIYDLLECLYQYIDSAGLSSVPLYFISPVANSSLEFSQIFAEWLCHNKQSKVYLPEP 360

Query: 361 PFPHAELIQTNKLKHYPSIHGDFSNDFRQPCVVFTGHPSLRFGDVVHFMELWGKSSLNTV 420
           PFPHAELIQTNKLKHYPSIHGDFSNDFRQPCVVFTGHPSLRFGDVVHFMELWGKSSLNTV
Sbjct: 361 PFPHAELIQTNKLKHYPSIHGDFSNDFRQPCVVFTGHPSLRFGDVVHFMELWGKSSLNTV 420

Query: 421 IFTEPDFSYLEALAPYQPLAMKCIYCPIDTRLNFIQVSKLLKEVQPLHVVCPEQYTQPPP 480
           IFTEPDFSYLEALAPYQPLAMKCIYCPIDTRLNFIQVSKLLKEVQPLHVVCPEQYTQPPP
Sbjct: 421 IFTEPDFSYLEALAPYQPLAMKCIYCPIDTRLNFIQVSKLLKEVQPLHVVCPEQYTQPPP 480

Query: 481 AQSHRMDLMIDCQPPAMSYRRAEVLALPFKRRYEKIEIMPELADSLVPMEIKPGISLATV 540
           AQSHRMDLMIDCQPPAMSYRRAEVLALPFKRRYEKIEIMPELADSLVPMEIKPGISLATV
Sbjct: 481 AQSHRMDLMIDCQPPAMSYRRAEVLALPFKRRYEKIEIMPELADSLVPMEIKPGISLATV 540

Query: 541 SAVLHTKDNKHLLQPPPRPAQPTSGKKRKRVSDDVPDCKVLKPLLSGSIPVEQFVQTLEK 600
           SAVLHTKDNKHLLQPPPRPAQPTSGKKRKRVSDDVPDCKVLKPLLSGSIPVEQFVQTLEK
Sbjct: 541 SAVLHTKDNKHLLQPPPRPAQPTSGKKRKRVSDDVPDCKVLKPLLSGSIPVEQFVQTLEK 600

Query: 601 HGFSDIKVEDTAKGHIVLLQEAETLIQIEEDSTHIICDNDEMLRVRLRDLVLKFLQKF 658
           HGFSDIKVEDTAKGHIVLLQEAETLIQIEEDSTHIICDNDEMLRVRLRDLVLKFLQKF
Sbjct: 601 HGFSDIKVEDTAKGHIVLLQEAETLIQIEEDSTHIICDNDEMLRVRLRDLVLKFLQKF 658


>gi|223555970 integrator complex subunit 9 isoform 2 [Homo sapiens]
          Length = 637

 Score = 1279 bits (3310), Expect = 0.0
 Identities = 637/658 (96%), Positives = 637/658 (96%), Gaps = 21/658 (3%)

Query: 1   MKLYCLSGHPTLPCNVLKFKSTTIMLDCGLDMTSTLNFLPLPLVQSPRLSNLPGWSLKDG 60
           MKLYCLSGHPTLPCNVLKFKSTTIMLDCGLDMTSTLNFLPLPLVQSPRLSNLPGWSLKDG
Sbjct: 1   MKLYCLSGHPTLPCNVLKFKSTTIMLDCGLDMTSTLNFLPLPLVQSPRLSNLPGWSLKDG 60

Query: 61  NAFLDKELKECSGHVFVDSVPEFCLPETELIDLSTVDVILISNYHCMMALPYITEHTGFT 120
           NAFLDK                     TELIDLSTVDVILISNYHCMMALPYITEHTGFT
Sbjct: 61  NAFLDK---------------------TELIDLSTVDVILISNYHCMMALPYITEHTGFT 99

Query: 121 GTVYATEPTVQIGRLLMEELVNFIERVPKAQSASLWKNKDIQRLLPSPLKDAVEVSTWRR 180
           GTVYATEPTVQIGRLLMEELVNFIERVPKAQSASLWKNKDIQRLLPSPLKDAVEVSTWRR
Sbjct: 100 GTVYATEPTVQIGRLLMEELVNFIERVPKAQSASLWKNKDIQRLLPSPLKDAVEVSTWRR 159

Query: 181 CYTMQEVNSALSKIQLVGYSQKIELFGAVQVTPLSSGYALGSSNWIIQSHYEKVSYVSGS 240
           CYTMQEVNSALSKIQLVGYSQKIELFGAVQVTPLSSGYALGSSNWIIQSHYEKVSYVSGS
Sbjct: 160 CYTMQEVNSALSKIQLVGYSQKIELFGAVQVTPLSSGYALGSSNWIIQSHYEKVSYVSGS 219

Query: 241 SLLTTHPQPMDQASLKNSDVLVLTGLTQIPTANPDGMVGEFCSNLALTVRNGGNVLVPCY 300
           SLLTTHPQPMDQASLKNSDVLVLTGLTQIPTANPDGMVGEFCSNLALTVRNGGNVLVPCY
Sbjct: 220 SLLTTHPQPMDQASLKNSDVLVLTGLTQIPTANPDGMVGEFCSNLALTVRNGGNVLVPCY 279

Query: 301 PSGVIYDLLECLYQYIDSAGLSSVPLYFISPVANSSLEFSQIFAEWLCHNKQSKVYLPEP 360
           PSGVIYDLLECLYQYIDSAGLSSVPLYFISPVANSSLEFSQIFAEWLCHNKQSKVYLPEP
Sbjct: 280 PSGVIYDLLECLYQYIDSAGLSSVPLYFISPVANSSLEFSQIFAEWLCHNKQSKVYLPEP 339

Query: 361 PFPHAELIQTNKLKHYPSIHGDFSNDFRQPCVVFTGHPSLRFGDVVHFMELWGKSSLNTV 420
           PFPHAELIQTNKLKHYPSIHGDFSNDFRQPCVVFTGHPSLRFGDVVHFMELWGKSSLNTV
Sbjct: 340 PFPHAELIQTNKLKHYPSIHGDFSNDFRQPCVVFTGHPSLRFGDVVHFMELWGKSSLNTV 399

Query: 421 IFTEPDFSYLEALAPYQPLAMKCIYCPIDTRLNFIQVSKLLKEVQPLHVVCPEQYTQPPP 480
           IFTEPDFSYLEALAPYQPLAMKCIYCPIDTRLNFIQVSKLLKEVQPLHVVCPEQYTQPPP
Sbjct: 400 IFTEPDFSYLEALAPYQPLAMKCIYCPIDTRLNFIQVSKLLKEVQPLHVVCPEQYTQPPP 459

Query: 481 AQSHRMDLMIDCQPPAMSYRRAEVLALPFKRRYEKIEIMPELADSLVPMEIKPGISLATV 540
           AQSHRMDLMIDCQPPAMSYRRAEVLALPFKRRYEKIEIMPELADSLVPMEIKPGISLATV
Sbjct: 460 AQSHRMDLMIDCQPPAMSYRRAEVLALPFKRRYEKIEIMPELADSLVPMEIKPGISLATV 519

Query: 541 SAVLHTKDNKHLLQPPPRPAQPTSGKKRKRVSDDVPDCKVLKPLLSGSIPVEQFVQTLEK 600
           SAVLHTKDNKHLLQPPPRPAQPTSGKKRKRVSDDVPDCKVLKPLLSGSIPVEQFVQTLEK
Sbjct: 520 SAVLHTKDNKHLLQPPPRPAQPTSGKKRKRVSDDVPDCKVLKPLLSGSIPVEQFVQTLEK 579

Query: 601 HGFSDIKVEDTAKGHIVLLQEAETLIQIEEDSTHIICDNDEMLRVRLRDLVLKFLQKF 658
           HGFSDIKVEDTAKGHIVLLQEAETLIQIEEDSTHIICDNDEMLRVRLRDLVLKFLQKF
Sbjct: 580 HGFSDIKVEDTAKGHIVLLQEAETLIQIEEDSTHIICDNDEMLRVRLRDLVLKFLQKF 637


>gi|7706427 cleavage and polyadenylation specific factor 3, 73kDa
           [Homo sapiens]
          Length = 684

 Score = 73.2 bits (178), Expect = 7e-13
 Identities = 97/476 (20%), Positives = 168/476 (35%), Gaps = 106/476 (22%)

Query: 14  CNVLKFKSTTIMLDCGLDMTSTLNFLPLPLVQSPRLSNLPGWSLKDGNAFLDKELKECSG 73
           C +L+FK   IMLDCG+                      PG    D              
Sbjct: 27  CIILEFKGRKIMLDCGIH---------------------PGLEGMDA------------- 52

Query: 74  HVFVDSVPEFCLPETELIDLSTVDVILISNYHC--MMALPYITEHTGFTGTVYATEPTVQ 131
                      LP  +LID + +D++LIS++H     ALP+  + T F G  + T  T  
Sbjct: 53  -----------LPYIDLIDPAEIDLLLISHFHLDHCGALPWFLQKTSFKGRTFMTHATKA 101

Query: 132 IGRLLMEELVNFIERVPKAQSASLWKNKDIQRLLPSPLKDAVEVSTWRRCYTMQEVNSAL 191
           I R L+ + V                                 +S     YT  ++  ++
Sbjct: 102 IYRWLLSDYVK-----------------------------VSNISADDMLYTETDLEESM 132

Query: 192 SKIQLVGYSQKIELFGAVQVTPLSSGYALGSSNWIIQSHYEKVSYVSGSSLLTTHPQPMD 251
            KI+ + + +  E+ G ++     +G+ LG++ ++I+    K+ Y    S          
Sbjct: 133 DKIETINFHEVKEVAG-IKFWCYHAGHVLGAAMFMIEIAGVKLLYTGDFSRQEDRHLMAA 191

Query: 252 QASLKNSDVLVLTGL--TQIPTANPDGMVGEFCSNLALTVRNGGNVLVPCYPSGVIYDLL 309
           +      D+L++     T I     +     FC+ +   V  GG  L+P +  G   +LL
Sbjct: 192 EIPNIKPDILIIESTYGTHIHEKREE-REARFCNTVHDIVNRGGRGLIPVFALGRAQELL 250

Query: 310 ECLYQYIDS-AGLSSVPLYFISPVANSSLEFSQIFAEWLCHNKQSKVYLPEPPFPHAELI 368
             L +Y  +   L  +P+Y+ S +A   +   Q +   + ++K  K      PF    + 
Sbjct: 251 LILDEYWQNHPELHDIPIYYASSLAKKCMAVYQTYVNAM-NDKIRKQININNPFVFKHIS 309

Query: 369 QTNKLKHYPSIHGDFSNDFRQPCVVFTGHPSLRFGDVVHFMELWGKSSLNTV-------- 420
               + H+  I          P VV      ++ G      E W     N V        
Sbjct: 310 NLKSMDHFDDI---------GPSVVMASPGMMQSGLSRELFESWCTDKRNGVIIAGYCVE 360

Query: 421 ------IFTEPDFSYLEALAPYQPLAMKCIYCPIDTRLNFIQVSKLLKEVQPLHVV 470
                 I +EP+           PL M   Y       ++ Q S+ ++ ++P HV+
Sbjct: 361 GTLAKHIMSEPE-EITTMSGQKLPLKMSVDYISFSAHTDYQQTSEFIRALKPPHVI 415


>gi|33300633 cleavage and polyadenylation specific factor 3-like
           [Homo sapiens]
          Length = 600

 Score = 72.0 bits (175), Expect = 2e-12
 Identities = 76/331 (22%), Positives = 132/331 (39%), Gaps = 47/331 (14%)

Query: 96  VDVILISNYHC--MMALPYITEHTGFTGTVYATEPTVQIGRLLMEELVNFIERVPKAQSA 153
           +D ++IS++H     ALPY +E  G+ G +Y T PT  I  +L+E+              
Sbjct: 61  LDCVIISHFHLDHCGALPYFSEMVGYDGPIYMTHPTQAICPILLEDY------------- 107

Query: 154 SLWKNKDIQRLLPSPLKDAVEVSTWRRCYTMQEVNSALSKIQLVGYSQKIELFGAVQVTP 213
                           K AV+       +T Q +   + K+  V   Q +++   +++  
Sbjct: 108 ---------------RKIAVDKKGEANFFTSQMIKDCMKKVVAVHLHQTVQVDDELEIKA 152

Query: 214 LSSGYALGSSNWIIQSHYEKVSYVSGSSLLTTHPQPMDQASL-KNSDVLVLTGLTQIPTA 272
             +G+ LG++ + I+   E V Y    ++  T  + +  A + K    L++T  T   T 
Sbjct: 153 YYAGHVLGAAMFQIKVGSESVVYTGDYNM--TPDRHLGAAWIDKCRPNLLITESTYATTI 210

Query: 273 NPDGMVGE--FCSNLALTVRNGGNVLVPCYPSGVIYDLLECLYQYIDSAGLSSVPLYFIS 330
                  E  F   +  TV  GG VL+P +  G   +L   L  + +   L  VP+YF +
Sbjct: 211 RDSKRCRERDFLKKVHETVERGGKVLIPVFALGRAQELCILLETFWERMNL-KVPIYFST 269

Query: 331 PVANSSLEFSQIFAEWLCHNKQSKVYLPEPPFPHAELIQTNKLKHYPSIHGDFSNDFRQP 390
            +   +  + ++F  W  + K  K ++    F         + KH  +    F+ D   P
Sbjct: 270 GLTEKANHYYKLFIPW-TNQKIRKTFVQRNMF---------EFKHIKAFDRAFA-DNPGP 318

Query: 391 CVVFTGHPSLRFGDVVHFMELWGKSSLNTVI 421
            VVF     L  G  +     W  +  N VI
Sbjct: 319 MVVFATPGMLHAGQSLQIFRKWAGNEKNMVI 349


>gi|34101288 cleavage and polyadenylation specific factor 2 [Homo
           sapiens]
          Length = 782

 Score = 65.1 bits (157), Expect = 2e-10
 Identities = 80/349 (22%), Positives = 144/349 (41%), Gaps = 68/349 (19%)

Query: 96  VDVILISNYHCMM--ALPYITEHTGFTGTVYATEPTVQIGRLLMEELVNFIERVPKAQSA 153
           +D +L+S+   +   ALPY     G    +YAT P  ++G++ M +L             
Sbjct: 55  IDAVLLSHPDPLHLGALPYAVGKLGLNCAIYATIPVYKMGQMFMYDLYQ----------- 103

Query: 154 SLWKNKDIQRLLPSPLKDAVEVSTWRRCYTMQEVNSALSKIQLVGYSQKIELFG---AVQ 210
           S    +D                     +T+ +V++A  KIQ + +SQ + L G    + 
Sbjct: 104 SRHNTEDFT------------------LFTLDDVDAAFDKIQQLKFSQIVNLKGKGHGLS 145

Query: 211 VTPLSSGYALGSSNW-IIQSHYEKVSY-----------VSGSSLLTTHPQPMDQASLKNS 258
           +TPL +G+ +G + W I++   E++ Y           ++G SL     + + + SL  +
Sbjct: 146 ITPLPAGHMIGGTIWKIVKDGEEEIVYAVDFNHKREIHLNGCSL-----EMLSRPSLLIT 200

Query: 259 DVLVLTGLTQIPTANPDGMVGEFCSNLALTVRNGGNVLVPCYPSGVIYDLLECLYQY--I 316
           D    T +        +    +  +N+  T+R  GNVL+    +G + +L + L Q    
Sbjct: 201 DSFNATYVQPRRKQRDE----QLLTNVLETLRGDGNVLIAVDTAGRVLELAQLLDQIWRT 256

Query: 317 DSAGLSSVPLYFISPVANSSLEFSQIFAEWLCHNKQSKVYLPEPPFPHAELIQTNKLKHY 376
             AGL    L  ++ V+ + +EFS+   EW+  +K  + +  +   P        + +H 
Sbjct: 257 KDAGLGVYSLALLNNVSYNVVEFSKSQVEWM-SDKLMRCFEDKRNNPF-------QFRHL 308

Query: 377 PSIHG--DFSNDFRQPCVVFTGHPSLRFGDVVHFMELWGKSSLNTVIFT 423
              HG  D +     P VV    P L  G        W +   N++I T
Sbjct: 309 SLCHGLSDLAR-VPSPKVVLASQPDLECGFSRDLFIQWCQDPKNSIILT 356


>gi|4506889 mitogen-activated protein kinase kinase 4 [Homo sapiens]
          Length = 399

 Score = 32.0 bits (71), Expect = 1.9
 Identities = 17/58 (29%), Positives = 33/58 (56%), Gaps = 3/58 (5%)

Query: 503 EVLALPFKRRYEKIEIMPELADSLVPMEIKPGISLATVSAVLHTKDNKHLLQPPPRPA 560
           E+++  F + Y+ +     + D ++P EI   I+LATV A+ H K+N  ++    +P+
Sbjct: 179 ELMSTSFDKFYKYVY---SVLDDVIPEEILGKITLATVKALNHLKENLKIIHRDIKPS 233


>gi|55741675 hypothetical protein LOC22889 [Homo sapiens]
          Length = 614

 Score = 32.0 bits (71), Expect = 1.9
 Identities = 29/111 (26%), Positives = 46/111 (41%), Gaps = 15/111 (13%)

Query: 472 PEQYTQPPPAQSHRMDLMIDCQPPAMSYRRAEVLALP-----FKRRYEKIEIMPELADSL 526
           P+Q  QPP         +    PPA+S     + ALP        +Y   ++ P  +   
Sbjct: 370 PQQPVQPPYG-------VPSIVPPAVSLAPGVLPALPTGVPPVPTQYPITQVQPPASTGQ 422

Query: 527 VPMEIKPGISLATVSAVLHTKDNKHLLQPPPRPAQPTSGKKRKRVSDDVPD 577
            PM   P I  A V   L           PP P+QP +  +++R ++++PD
Sbjct: 423 SPMG-GPFIPAAPVKTALPAGPQPQPQPQPPLPSQPQA--QKRRFTEELPD 470


>gi|239756207 PREDICTED: similar to pre-B lymphocyte gene 2 [Homo
           sapiens]
          Length = 120

 Score = 31.2 bits (69), Expect = 3.2
 Identities = 20/56 (35%), Positives = 32/56 (57%), Gaps = 3/56 (5%)

Query: 177 TWRRCYTMQEVNSALSKIQLVGYSQKIELFGA-VQVTPLSSGYALGS--SNWIIQS 229
           TWR  + +    SA S++QLV    +++  GA V+V+  +SGY   S   NW+ Q+
Sbjct: 4   TWRILFLVAAATSAHSQVQLVQSGAEVKKPGASVKVSCKASGYTFTSYDINWVRQA 59


>gi|239750745 PREDICTED: hypothetical protein XP_002347495 [Homo
           sapiens]
          Length = 120

 Score = 31.2 bits (69), Expect = 3.2
 Identities = 20/56 (35%), Positives = 32/56 (57%), Gaps = 3/56 (5%)

Query: 177 TWRRCYTMQEVNSALSKIQLVGYSQKIELFGA-VQVTPLSSGYALGS--SNWIIQS 229
           TWR  + +    SA S++QLV    +++  GA V+V+  +SGY   S   NW+ Q+
Sbjct: 4   TWRILFLVAAATSAHSQVQLVQSGAEVKKPGASVKVSCKASGYTFTSYDINWVRQA 59


>gi|20986497 mitogen-activated protein kinase 7 isoform 1 [Homo
           sapiens]
          Length = 816

 Score = 31.2 bits (69), Expect = 3.2
 Identities = 32/144 (22%), Positives = 55/144 (38%), Gaps = 13/144 (9%)

Query: 428 SYLEALAPYQPLAMKCIYCPIDTRLNFIQVSKLLKEVQPLHVVCPEQYTQPPPAQSHRMD 487
           +Y+++L P QP+  + +Y P   R     + ++L+      +        P  A+ H  D
Sbjct: 296 AYIQSLPPRQPVPWETVY-PGADRQALSLLGRMLRFEPSARISAAAALRHPFLAKYHDPD 354

Query: 488 LMIDCQPP--------AMSYRRAEVLAL----PFKRRYEKIEIMPELADSLVPMEIKPGI 535
              DC PP        A++  R +   +     F  R E I        SL P+  +PG 
Sbjct: 355 DEPDCAPPFDFAFDREALTRERIKEAIVAEIEDFHARREGIRQQIRFQPSLQPVASEPGC 414

Query: 536 SLATVSAVLHTKDNKHLLQPPPRP 559
               + +      +  +  PPP P
Sbjct: 415 PDVEMPSPWAPSGDCAMESPPPAP 438


>gi|209529736 mitogen-activated protein kinase 7 isoform 1 [Homo
           sapiens]
          Length = 816

 Score = 31.2 bits (69), Expect = 3.2
 Identities = 32/144 (22%), Positives = 55/144 (38%), Gaps = 13/144 (9%)

Query: 428 SYLEALAPYQPLAMKCIYCPIDTRLNFIQVSKLLKEVQPLHVVCPEQYTQPPPAQSHRMD 487
           +Y+++L P QP+  + +Y P   R     + ++L+      +        P  A+ H  D
Sbjct: 296 AYIQSLPPRQPVPWETVY-PGADRQALSLLGRMLRFEPSARISAAAALRHPFLAKYHDPD 354

Query: 488 LMIDCQPP--------AMSYRRAEVLAL----PFKRRYEKIEIMPELADSLVPMEIKPGI 535
              DC PP        A++  R +   +     F  R E I        SL P+  +PG 
Sbjct: 355 DEPDCAPPFDFAFDREALTRERIKEAIVAEIEDFHARREGIRQQIRFQPSLQPVASEPGC 414

Query: 536 SLATVSAVLHTKDNKHLLQPPPRP 559
               + +      +  +  PPP P
Sbjct: 415 PDVEMPSPWAPSGDCAMESPPPAP 438


>gi|209529734 mitogen-activated protein kinase 7 isoform 1 [Homo
           sapiens]
          Length = 816

 Score = 31.2 bits (69), Expect = 3.2
 Identities = 32/144 (22%), Positives = 55/144 (38%), Gaps = 13/144 (9%)

Query: 428 SYLEALAPYQPLAMKCIYCPIDTRLNFIQVSKLLKEVQPLHVVCPEQYTQPPPAQSHRMD 487
           +Y+++L P QP+  + +Y P   R     + ++L+      +        P  A+ H  D
Sbjct: 296 AYIQSLPPRQPVPWETVY-PGADRQALSLLGRMLRFEPSARISAAAALRHPFLAKYHDPD 354

Query: 488 LMIDCQPP--------AMSYRRAEVLAL----PFKRRYEKIEIMPELADSLVPMEIKPGI 535
              DC PP        A++  R +   +     F  R E I        SL P+  +PG 
Sbjct: 355 DEPDCAPPFDFAFDREALTRERIKEAIVAEIEDFHARREGIRQQIRFQPSLQPVASEPGC 414

Query: 536 SLATVSAVLHTKDNKHLLQPPPRP 559
               + +      +  +  PPP P
Sbjct: 415 PDVEMPSPWAPSGDCAMESPPPAP 438


>gi|20986499 mitogen-activated protein kinase 7 isoform 2 [Homo
           sapiens]
          Length = 677

 Score = 31.2 bits (69), Expect = 3.2
 Identities = 32/144 (22%), Positives = 55/144 (38%), Gaps = 13/144 (9%)

Query: 428 SYLEALAPYQPLAMKCIYCPIDTRLNFIQVSKLLKEVQPLHVVCPEQYTQPPPAQSHRMD 487
           +Y+++L P QP+  + +Y P   R     + ++L+      +        P  A+ H  D
Sbjct: 157 AYIQSLPPRQPVPWETVY-PGADRQALSLLGRMLRFEPSARISAAAALRHPFLAKYHDPD 215

Query: 488 LMIDCQPP--------AMSYRRAEVLAL----PFKRRYEKIEIMPELADSLVPMEIKPGI 535
              DC PP        A++  R +   +     F  R E I        SL P+  +PG 
Sbjct: 216 DEPDCAPPFDFAFDREALTRERIKEAIVAEIEDFHARREGIRQQIRFQPSLQPVASEPGC 275

Query: 536 SLATVSAVLHTKDNKHLLQPPPRP 559
               + +      +  +  PPP P
Sbjct: 276 PDVEMPSPWAPSGDCAMESPPPAP 299


>gi|34740329 heterogeneous nuclear ribonucleoprotein A3 [Homo
           sapiens]
          Length = 378

 Score = 31.2 bits (69), Expect = 3.2
 Identities = 17/52 (32%), Positives = 28/52 (53%), Gaps = 3/52 (5%)

Query: 553 LQPPPRPAQPTSGKKRKRVSDDVPDCK---VLKPLLSGSIPVEQFVQTLEKH 601
           ++PPP   QP SG++R+R  ++  D K    L+ L  G +  E    +L +H
Sbjct: 3   VKPPPGRPQPDSGRRRRRRGEEGHDPKEPEQLRKLFIGGLSFETTDDSLREH 54


>gi|44888818 DIP2 disco-interacting protein 2 homolog C [Homo
           sapiens]
          Length = 1556

 Score = 30.8 bits (68), Expect = 4.1
 Identities = 39/144 (27%), Positives = 58/144 (40%), Gaps = 21/144 (14%)

Query: 149 KAQSASLWKNKDIQRLLPSPLKD-AVEVSTWRRCYTMQEVNSALSKIQLVGYSQKIELFG 207
           +A  A+L K+K+ +  +P P K  ++ V T    YT  + +S        G   +  + G
Sbjct: 94  EAVQAALAKHKERKMAVPMPSKRRSLVVQTSMDAYTPPDTSS--------GSEDEGSVQG 145

Query: 208 AVQVTPLSSGYALGSSNWIIQS-HYEKVSYVSGSSLLT-----TH--PQPMDQASLKN-- 257
             Q TP SS  ++   +WI Q+ H    S  S SS  +      H     M Q  ++N  
Sbjct: 146 DSQGTPTSSQGSINMEHWISQAIHGSTTSTTSSSSTQSGGSGAAHRLADVMAQTHIENHS 205

Query: 258 --SDVLVLTGLTQIPTANPDGMVG 279
              DV   T    I    P G  G
Sbjct: 206 APPDVTTYTSEHSIQVERPQGSTG 229


>gi|26638662 mutS homolog 5 isoform a [Homo sapiens]
          Length = 851

 Score = 30.4 bits (67), Expect = 5.4
 Identities = 24/83 (28%), Positives = 36/83 (43%)

Query: 19  FKSTTIMLDCGLDMTSTLNFLPLPLVQSPRLSNLPGWSLKDGNAFLDKELKECSGHVFVD 78
           F S+ I  DC L     L F P+PL+   ++  L G     G   +  EL++ +  V + 
Sbjct: 167 FLSSIIPFDCLLTPPGDLRFTPIPLLIPSQVRALGGLLKFLGRRRIGVELEDYNVSVPIL 226

Query: 79  SVPEFCLPETELIDLSTVDVILI 101
              +F L     ID  T  V+ I
Sbjct: 227 GFKKFMLTHLVNIDQDTYSVLQI 249


>gi|44955929 calmodulin regulated spectrin-associated protein 1-like 1
            [Homo sapiens]
          Length = 1478

 Score = 30.4 bits (67), Expect = 5.4
 Identities = 23/75 (30%), Positives = 33/75 (44%), Gaps = 7/75 (9%)

Query: 535  ISLATVSAVLHTKDNKHLLQP---PPRPA-QPTSGKKRKRVSDDVPDCKVLKPLLSGSIP 590
            +SL     V  T +   L QP   PP+P   PT+ K    +   + D   LKP     +P
Sbjct: 1073 LSLPVTETVCLTPNEDQLNQPTEPPPKPVFPPTAPKNVNLIEVSLSD---LKPPEKADVP 1129

Query: 591  VEQFVQTLEKHGFSD 605
            VE++    +K  F D
Sbjct: 1130 VEKYDGESDKEQFDD 1144


>gi|239756276 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 141

 Score = 30.0 bits (66), Expect = 7.1
 Identities = 19/61 (31%), Positives = 25/61 (40%), Gaps = 10/61 (16%)

Query: 531 IKPGISLATVSAVLHTKDNKHLLQPPPRPAQPTSGKK----------RKRVSDDVPDCKV 580
           ++P  S A     L  +D   LL P P P QP SG +          R R +D  P  + 
Sbjct: 77  LRPAASYACPGLGLQPRDAPRLLGPAPLPGQPASGARGTAQPSRRHQRHRFADAKPSARP 136

Query: 581 L 581
           L
Sbjct: 137 L 137


>gi|194294554 SET binding protein 1 isoform a [Homo sapiens]
          Length = 1596

 Score = 30.0 bits (66), Expect = 7.1
 Identities = 16/42 (38%), Positives = 22/42 (52%), Gaps = 4/42 (9%)

Query: 525  SLVPMEIKPGIS----LATVSAVLHTKDNKHLLQPPPRPAQP 562
            SL P+ ++P  S    +AT+ AV+H       L PPP P  P
Sbjct: 1490 SLSPLVLEPAASQDTIMATIEAVIHMAREAPPLPPPPPPPLP 1531


>gi|210032580 SET domain containing 1B [Homo sapiens]
          Length = 1923

 Score = 29.6 bits (65), Expect = 9.2
 Identities = 34/145 (23%), Positives = 55/145 (37%), Gaps = 33/145 (22%)

Query: 466  PLHVVCPEQYTQPP--PAQSHRMDLMIDCQPPAMSYRRAEVLALPFKRRYEKIEIMPELA 523
            P+ V  P    +PP  P  S    +++  +PPA        L+ P +     +E+ PE  
Sbjct: 1213 PVGVEEPADSREPPEEPGLSQEGAMLLSPEPPAKEVEARPPLS-PERAPEHDLEVEPE-P 1270

Query: 524  DSLVPMEIKPGISLATVSAVLHTKDNKHLLQPPPRPAQPTSGKKRKRVSD----DVP--- 576
              ++P+ ++P +                   PPPRP +P S       +D     VP   
Sbjct: 1271 PMMLPLPLQPPL-------------------PPPRPPRPPSPPPEPETTDASHPSVPPEP 1311

Query: 577  ---DCKVLKPLLSGSIPVEQFVQTL 598
               D     P L GS+   Q  +T+
Sbjct: 1312 LAEDHPPHTPGLCGSLAKSQSTETV 1336


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.320    0.136    0.413 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 26,842,304
Number of Sequences: 37866
Number of extensions: 1271847
Number of successful extensions: 3587
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 14
Number of HSP's that attempted gapping in prelim test: 3569
Number of HSP's gapped (non-prelim): 30
length of query: 658
length of database: 18,247,518
effective HSP length: 109
effective length of query: 549
effective length of database: 14,120,124
effective search space: 7751948076
effective search space used: 7751948076
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 65 (29.6 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.