Guide to the Human Genome
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Name: LOC153328 Sequence: fasta or formatted (157aa) NCBI GI: 223468576
Description:

mitochondrial carrier protein-like

Not currently referenced in the text

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.4         10           2
 C cysteine            1.9          3           1
 D aspartate           3.2          5           1
 E glutamate           3.2          5           1
 F phenylalanine       7.0         11           2
 G glycine            12.1         19           2
 H histidine           2.5          4           1
 I isoleucine          3.8          6           1
 K lysine              1.9          3           1
 L leucine             8.9         14           3
 M methionine          4.5          7           1
 N asparagine          1.9          3           1
 P proline             5.7          9           2
 Q glutamine           4.5          7           1
 R arginine            6.4         10           2
 S serine              8.3         13           1
 T threonine           5.1          8           2
 V valine             10.2         16           2
 W tryptophan          0.6          1           1
 Y tyrosine            1.9          3           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   mitochondrial carrier protein-like 
SLC25A45              0.354   solute carrier family 25, member 45 isoform a [Homo...
C14orf68              0.279   chromosome 14 open reading frame 68 
SLC25A45              0.207   solute carrier family 25, member 45 isoform b [Homo...
SLC25A29              0.207   solute carrier family 25, member 29 
SLC25A20              0.150   carnitine/acylcarnitine translocase 
SLC25A2               0.105   solute carrier family 25 member 2 
SLC25A36              0.102   solute carrier family 25, member 36 isoform b [Homo...
SLC25A36              0.102   solute carrier family 25, member 36 isoform a [Homo...
SLC25A21              0.102   solute carrier family 25 (mitochondrial oxodicarboxy...
UCP1                  0.099   uncoupling protein 1 
SLC25A4               0.095   solute carrier family 25 (mitochondrial carrier; ade...
SLC25A6               0.095   solute carrier family 25, member A6 
SLC25A16              0.092   solute carrier family 25, member 16 
SLC25A13              0.092   solute carrier family 25, member 13 isoform 2 
SLC25A13              0.092   solute carrier family 25, member 13 isoform 1 [Homo...
SLC25A5               0.092   solute carrier family 25, member 5 
SLC25A15              0.088   mitochondrial ornithine transporter 1 
SLC25A31              0.085   solute carrier family 25 (mitochondrial carrier; ade...
SLC25A12              0.085   solute carrier family 25, member 12 
SLC25A38              0.085   solute carrier family 25, member 38 
SLC25A19              0.082   solute carrier family 25, member 19 
SLC25A19              0.082   solute carrier family 25, member 19 
SLC25A19              0.082   solute carrier family 25, member 19 
SLC25A14              0.082   solute carrier family 25, member 14 isoform UCP5L [Ho...
SLC25A14              0.082   solute carrier family 25, member 14 isoform UCP5S [H...
SLC25A30              0.078   solute carrier family 25, member 30 
UCP2                  0.078   uncoupling protein 2 
SLC25A32              0.075   solute carrier family 25, member 32 
SLC25A18              0.075   solute carrier 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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