Guide to the Human Genome
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Name: DET1 Sequence: fasta or formatted (550aa) NCBI GI: 221136821
Description:

de-etiolated 1 isoform 2

Referenced in:

Cullins and SCF Complexes

Other entries for this name:
alt prot [561aa] de-etiolated 1 isoform 1
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             4.9         27           2
 C cysteine            2.4         13           2
 D aspartate           5.5         30           2
 E glutamate           5.6         31           1
 F phenylalanine       7.5         41           2
 G glycine             4.4         24           2
 H histidine           4.0         22           2
 I isoleucine          5.1         28           2
 K lysine              2.9         16           1
 L leucine             8.9         49           2
 M methionine          1.5          8           1
 N asparagine          5.1         28           2
 P proline             4.5         25           2
 Q glutamine           5.3         29           3
 R arginine            8.2         45           3
 S serine              6.9         38           2
 T threonine           5.5         30           2
 V valine              7.6         42           2
 W tryptophan          0.7          4           1
 Y tyrosine            3.6         20           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   de-etiolated 1 isoform 2 
DET1                  1.000   de-etiolated 1 isoform 1 
RPAP1                 0.012   RNA polymerase II associated protein 1 
FHDC1                 0.009   FH2 domain containing 1 
WDR5                  0.007   WD repeat domain 5 
WDR5                  0.007   WD repeat domain 5 
WDR5B                 0.006   WD repeat domain 5B 
GAS2L1                0.005   growth arrest-specific 2 like 1 isoform b 
GAS2L1                0.005   growth arrest-specific 2 like 1 isoform a 
GAS2L1                0.005   growth arrest-specific 2 like 1 isoform a 
ZDBF2                 0.005   zinc finger, DBF-type containing 2 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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