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Search of human proteins with 219282747
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|219282747 KIAA1772 [Homo sapiens]
(1923 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|219282747 KIAA1772 [Homo sapiens] 3845 0.0
gi|23397642 GREB1 protein isoform a [Homo sapiens] 1858 0.0
gi|23397644 GREB1 protein isoform b [Homo sapiens] 407 e-113
gi|116734676 GREB1 protein isoform c [Homo sapiens] 354 5e-97
gi|57864582 hornerin [Homo sapiens] 45 9e-04
gi|8923106 zinc finger, CCHC domain containing 10 [Homo sapiens] 42 0.004
gi|148612809 WNK lysine deficient protein kinase 1 [Homo sapiens] 41 0.010
gi|169658378 trinucleotide repeat containing 18 [Homo sapiens] 40 0.017
gi|118572613 splicing coactivator subunit SRm300 [Homo sapiens] 40 0.017
gi|28372563 growth arrest-specific 2 like 3 [Homo sapiens] 40 0.029
gi|115430223 galectin 3 [Homo sapiens] 39 0.037
gi|14993776 skeletal myosin light chain kinase [Homo sapiens] 39 0.037
gi|161016767 mucin 21 [Homo sapiens] 39 0.037
gi|169166609 PREDICTED: similar to ribonucleic acid binding prot... 39 0.064
gi|113415994 PREDICTED: similar to ribonucleic acid binding prot... 39 0.064
gi|113415504 PREDICTED: similar to ribonucleic acid binding prot... 39 0.064
gi|169166499 PREDICTED: similar to ribonucleic acid binding prot... 39 0.064
gi|113415498 PREDICTED: similar to ribonucleic acid binding prot... 39 0.064
gi|88973230 PREDICTED: similar to ribonucleic acid binding prote... 39 0.064
gi|6857826 RNA-binding protein S1, serine-rich domain [Homo sapi... 39 0.064
gi|18379334 RNA-binding protein S1, serine-rich domain [Homo sap... 39 0.064
gi|18450371 protein tyrosine phosphatase, receptor type, A isofo... 38 0.11
gi|18450369 protein tyrosine phosphatase, receptor type, A isofo... 38 0.11
gi|62988361 absent in melanoma 1 [Homo sapiens] 38 0.11
gi|31881687 replication factor C 4 [Homo sapiens] 37 0.14
gi|4506491 replication factor C 4 [Homo sapiens] 37 0.14
gi|110431348 deleted in colorectal carcinoma [Homo sapiens] 37 0.19
gi|158187521 A-kinase anchor protein 5 [Homo sapiens] 36 0.32
gi|92859678 small nuclear RNA activating complex, polypeptide 4,... 36 0.32
gi|112382226 atrophin-1 like protein isoform b [Homo sapiens] 36 0.41
>gi|219282747 KIAA1772 [Homo sapiens]
Length = 1923
Score = 3845 bits (9972), Expect = 0.0
Identities = 1923/1923 (100%), Positives = 1923/1923 (100%)
Query: 1 MGNSYAGQLKSARFEEALHNSIEASLRCSSVVPRPIFSQLYLDPDQHPFSSADVKPKVED 60
MGNSYAGQLKSARFEEALHNSIEASLRCSSVVPRPIFSQLYLDPDQHPFSSADVKPKVED
Sbjct: 1 MGNSYAGQLKSARFEEALHNSIEASLRCSSVVPRPIFSQLYLDPDQHPFSSADVKPKVED 60
Query: 61 LDKDLVNRYTQNGSLDFSNNLTVNEMEDDEDDEEMSDSNSPPIPYSQKPAPEGSCTTDGF 120
LDKDLVNRYTQNGSLDFSNNLTVNEMEDDEDDEEMSDSNSPPIPYSQKPAPEGSCTTDGF
Sbjct: 61 LDKDLVNRYTQNGSLDFSNNLTVNEMEDDEDDEEMSDSNSPPIPYSQKPAPEGSCTTDGF 120
Query: 121 CQAGKDLRLVSLCMEQIDIPAGFLLVGAKSPNLPEHILVCAVDKRFLPDDHGKNALLGFS 180
CQAGKDLRLVSLCMEQIDIPAGFLLVGAKSPNLPEHILVCAVDKRFLPDDHGKNALLGFS
Sbjct: 121 CQAGKDLRLVSLCMEQIDIPAGFLLVGAKSPNLPEHILVCAVDKRFLPDDHGKNALLGFS 180
Query: 181 GNCIGCGERGFRYFTEFSNHINLKLTTQPKKQKHLKYYLVRSSQGVLSKGPLICWKECRS 240
GNCIGCGERGFRYFTEFSNHINLKLTTQPKKQKHLKYYLVRSSQGVLSKGPLICWKECRS
Sbjct: 181 GNCIGCGERGFRYFTEFSNHINLKLTTQPKKQKHLKYYLVRSSQGVLSKGPLICWKECRS 240
Query: 241 RQSSASCHSIKPSSSVSSTVTPENGTTNGYKSGFTQTDAANGNSSHGGKGSASSSTPAHT 300
RQSSASCHSIKPSSSVSSTVTPENGTTNGYKSGFTQTDAANGNSSHGGKGSASSSTPAHT
Sbjct: 241 RQSSASCHSIKPSSSVSSTVTPENGTTNGYKSGFTQTDAANGNSSHGGKGSASSSTPAHT 300
Query: 301 GNYSLSPRPSYASGDQATMFISGPPKKRHRGWYPGSPLPQPGLVVPVPTVRPLSRTEPLL 360
GNYSLSPRPSYASGDQATMFISGPPKKRHRGWYPGSPLPQPGLVVPVPTVRPLSRTEPLL
Sbjct: 301 GNYSLSPRPSYASGDQATMFISGPPKKRHRGWYPGSPLPQPGLVVPVPTVRPLSRTEPLL 360
Query: 361 SAPVPQTPLTGILQPRPIPAGETVIVPENLLSNSGVRPVILIGYGTLPYFYGNVGDIVVS 420
SAPVPQTPLTGILQPRPIPAGETVIVPENLLSNSGVRPVILIGYGTLPYFYGNVGDIVVS
Sbjct: 361 SAPVPQTPLTGILQPRPIPAGETVIVPENLLSNSGVRPVILIGYGTLPYFYGNVGDIVVS 420
Query: 421 PLLVNCYKIPQLENKDLEKLGLTGSQFLSVENMILLTIQYLVRLGPDQVPLREEFEQIML 480
PLLVNCYKIPQLENKDLEKLGLTGSQFLSVENMILLTIQYLVRLGPDQVPLREEFEQIML
Sbjct: 421 PLLVNCYKIPQLENKDLEKLGLTGSQFLSVENMILLTIQYLVRLGPDQVPLREEFEQIML 480
Query: 481 KAMQEFTLRERALQIGAQCVPVSPGQLPWLARLIASVSQDLVHVVVTQNSLAEGISETLR 540
KAMQEFTLRERALQIGAQCVPVSPGQLPWLARLIASVSQDLVHVVVTQNSLAEGISETLR
Sbjct: 481 KAMQEFTLRERALQIGAQCVPVSPGQLPWLARLIASVSQDLVHVVVTQNSLAEGISETLR 540
Query: 541 TLSEMRHYQRLPDYVVVICASKIRGNEFCVVVLGQHQSRALAESMLTTSEFLKEISYELI 600
TLSEMRHYQRLPDYVVVICASKIRGNEFCVVVLGQHQSRALAESMLTTSEFLKEISYELI
Sbjct: 541 TLSEMRHYQRLPDYVVVICASKIRGNEFCVVVLGQHQSRALAESMLTTSEFLKEISYELI 600
Query: 601 TGKVSFLASHFKTTSLGDDLDKLLEKMQQRRGDSVVTPFDGDLNECVSPQEAAAMIPTQN 660
TGKVSFLASHFKTTSLGDDLDKLLEKMQQRRGDSVVTPFDGDLNECVSPQEAAAMIPTQN
Sbjct: 601 TGKVSFLASHFKTTSLGDDLDKLLEKMQQRRGDSVVTPFDGDLNECVSPQEAAAMIPTQN 660
Query: 661 LDLDNETFHIYQPQLTVARKLLSQVCAIADSGSQSLDLGHFSKVDFIIIVPRSEVLVQQT 720
LDLDNETFHIYQPQLTVARKLLSQVCAIADSGSQSLDLGHFSKVDFIIIVPRSEVLVQQT
Sbjct: 661 LDLDNETFHIYQPQLTVARKLLSQVCAIADSGSQSLDLGHFSKVDFIIIVPRSEVLVQQT 720
Query: 721 LQRIRQSGVLVDLGLEENGTAHQRAEKYVVRLDNEIQTKFEVFMRRVKQNPYTLFVLVHD 780
LQRIRQSGVLVDLGLEENGTAHQRAEKYVVRLDNEIQTKFEVFMRRVKQNPYTLFVLVHD
Sbjct: 721 LQRIRQSGVLVDLGLEENGTAHQRAEKYVVRLDNEIQTKFEVFMRRVKQNPYTLFVLVHD 780
Query: 781 NSHVELTSVISGSLSHSEPSHGLADRVINCREVLEAFNLLVLQVSSFPYTLQTQQSRISS 840
NSHVELTSVISGSLSHSEPSHGLADRVINCREVLEAFNLLVLQVSSFPYTLQTQQSRISS
Sbjct: 781 NSHVELTSVISGSLSHSEPSHGLADRVINCREVLEAFNLLVLQVSSFPYTLQTQQSRISS 840
Query: 841 SNEVHWIQLDTGEDVGCEEKLYFGLSEYSKSLQWGITSPLLRCDETFEKMVNTLLERYPR 900
SNEVHWIQLDTGEDVGCEEKLYFGLSEYSKSLQWGITSPLLRCDETFEKMVNTLLERYPR
Sbjct: 841 SNEVHWIQLDTGEDVGCEEKLYFGLSEYSKSLQWGITSPLLRCDETFEKMVNTLLERYPR 900
Query: 901 LHSMVVRCYLLIQQYSEALMALTTMASLRDHSTPETLSIMDDLISSPGKNKSGRGHMLII 960
LHSMVVRCYLLIQQYSEALMALTTMASLRDHSTPETLSIMDDLISSPGKNKSGRGHMLII
Sbjct: 901 LHSMVVRCYLLIQQYSEALMALTTMASLRDHSTPETLSIMDDLISSPGKNKSGRGHMLII 960
Query: 961 RVPSVQLAMLAKERLQEVRDKLGLQYRFEIILGNPATELSVATHFVARLKSWRGNEPEEW 1020
RVPSVQLAMLAKERLQEVRDKLGLQYRFEIILGNPATELSVATHFVARLKSWRGNEPEEW
Sbjct: 961 RVPSVQLAMLAKERLQEVRDKLGLQYRFEIILGNPATELSVATHFVARLKSWRGNEPEEW 1020
Query: 1021 IPRTYQDLDGLPCIVILTGKDPLGETFPRSLKYCDLRLIDSSYLTRTALEQEVGLACCYV 1080
IPRTYQDLDGLPCIVILTGKDPLGETFPRSLKYCDLRLIDSSYLTRTALEQEVGLACCYV
Sbjct: 1021 IPRTYQDLDGLPCIVILTGKDPLGETFPRSLKYCDLRLIDSSYLTRTALEQEVGLACCYV 1080
Query: 1081 SKEVIRGPTVALDLSGKEQERAAVSENDSDELLIDLERPQSNSSAVTGTSGSIMENGVSS 1140
SKEVIRGPTVALDLSGKEQERAAVSENDSDELLIDLERPQSNSSAVTGTSGSIMENGVSS
Sbjct: 1081 SKEVIRGPTVALDLSGKEQERAAVSENDSDELLIDLERPQSNSSAVTGTSGSIMENGVSS 1140
Query: 1141 SSTADKSQKQSLTPSFQSPATSLGLDEGVSASSAGAGAGETLKQECDSLGPQMASSTTSK 1200
SSTADKSQKQSLTPSFQSPATSLGLDEGVSASSAGAGAGETLKQECDSLGPQMASSTTSK
Sbjct: 1141 SSTADKSQKQSLTPSFQSPATSLGLDEGVSASSAGAGAGETLKQECDSLGPQMASSTTSK 1200
Query: 1201 PSSSSSGPRTLPWPGQPIRGCRGPQAALPPVVILSKAAYSLLGSQKSGKLPSSSSLLPHA 1260
PSSSSSGPRTLPWPGQPIRGCRGPQAALPPVVILSKAAYSLLGSQKSGKLPSSSSLLPHA
Sbjct: 1201 PSSSSSGPRTLPWPGQPIRGCRGPQAALPPVVILSKAAYSLLGSQKSGKLPSSSSLLPHA 1260
Query: 1261 DVAWVSSLRPLLNKDMSSEEQSLYYRQWTLARQHHADYSNQLDPASGTRNFHPRRLLLTG 1320
DVAWVSSLRPLLNKDMSSEEQSLYYRQWTLARQHHADYSNQLDPASGTRNFHPRRLLLTG
Sbjct: 1261 DVAWVSSLRPLLNKDMSSEEQSLYYRQWTLARQHHADYSNQLDPASGTRNFHPRRLLLTG 1320
Query: 1321 PPQVGKTGSYLQFLRILFRMLIRLLEVDVYDEEEINTDHNESSEVSQSEGEPWPDIESFS 1380
PPQVGKTGSYLQFLRILFRMLIRLLEVDVYDEEEINTDHNESSEVSQSEGEPWPDIESFS
Sbjct: 1321 PPQVGKTGSYLQFLRILFRMLIRLLEVDVYDEEEINTDHNESSEVSQSEGEPWPDIESFS 1380
Query: 1381 KMPFDVSVHDPKYSLMSLVYTEKLAGVKQEVIKESKVEEPRKRETVSIMLTKYAAYNTFH 1440
KMPFDVSVHDPKYSLMSLVYTEKLAGVKQEVIKESKVEEPRKRETVSIMLTKYAAYNTFH
Sbjct: 1381 KMPFDVSVHDPKYSLMSLVYTEKLAGVKQEVIKESKVEEPRKRETVSIMLTKYAAYNTFH 1440
Query: 1441 HCEQCRQYMDFTSASQMSDSTLHAFTFSSSMLGEEVQLYFIIPKSKESHFVFSKQGKHLE 1500
HCEQCRQYMDFTSASQMSDSTLHAFTFSSSMLGEEVQLYFIIPKSKESHFVFSKQGKHLE
Sbjct: 1441 HCEQCRQYMDFTSASQMSDSTLHAFTFSSSMLGEEVQLYFIIPKSKESHFVFSKQGKHLE 1500
Query: 1501 SMRLPLVSDKNLNAVKSPIFTPSSGRHEHGLLNLFHAMEGISHLHLLVVKEYEMPLYRKY 1560
SMRLPLVSDKNLNAVKSPIFTPSSGRHEHGLLNLFHAMEGISHLHLLVVKEYEMPLYRKY
Sbjct: 1501 SMRLPLVSDKNLNAVKSPIFTPSSGRHEHGLLNLFHAMEGISHLHLLVVKEYEMPLYRKY 1560
Query: 1561 WPNHIMLVLPGMFNNAGVGAARFLIKELSYHNLELERNRLEELGIKRQCVWPFIVMMDDS 1620
WPNHIMLVLPGMFNNAGVGAARFLIKELSYHNLELERNRLEELGIKRQCVWPFIVMMDDS
Sbjct: 1561 WPNHIMLVLPGMFNNAGVGAARFLIKELSYHNLELERNRLEELGIKRQCVWPFIVMMDDS 1620
Query: 1621 CVLWNIHSVQEPSSQPMEVGVSSKNVSLKTVLQHIEATPKIVHYAILGIQKWSSKLTSQS 1680
CVLWNIHSVQEPSSQPMEVGVSSKNVSLKTVLQHIEATPKIVHYAILGIQKWSSKLTSQS
Sbjct: 1621 CVLWNIHSVQEPSSQPMEVGVSSKNVSLKTVLQHIEATPKIVHYAILGIQKWSSKLTSQS 1680
Query: 1681 LKAPFSRCHVHDFILLNTDLTQNVQYDFNRYFCEDADFNLRTNSSGLLICRFNNFSLMKK 1740
LKAPFSRCHVHDFILLNTDLTQNVQYDFNRYFCEDADFNLRTNSSGLLICRFNNFSLMKK
Sbjct: 1681 LKAPFSRCHVHDFILLNTDLTQNVQYDFNRYFCEDADFNLRTNSSGLLICRFNNFSLMKK 1740
Query: 1741 HVQVGGQRDFIIKPKIMVSESLAPILPLQYICAPDSEHTLLAAPAQFLLEKFLQHASYKL 1800
HVQVGGQRDFIIKPKIMVSESLAPILPLQYICAPDSEHTLLAAPAQFLLEKFLQHASYKL
Sbjct: 1741 HVQVGGQRDFIIKPKIMVSESLAPILPLQYICAPDSEHTLLAAPAQFLLEKFLQHASYKL 1800
Query: 1801 FPKAIHNFRSPVLAIDCYLNIGPEVAICYISSRPHSSNVNCEGVFFSGLLLYLCDSFVGA 1860
FPKAIHNFRSPVLAIDCYLNIGPEVAICYISSRPHSSNVNCEGVFFSGLLLYLCDSFVGA
Sbjct: 1801 FPKAIHNFRSPVLAIDCYLNIGPEVAICYISSRPHSSNVNCEGVFFSGLLLYLCDSFVGA 1860
Query: 1861 DLKKFKFLKGATLCVICQDRSSLRQTIVRLELEDEWQFRLRDEFQTANSSDDKPLYFLTG 1920
DLKKFKFLKGATLCVICQDRSSLRQTIVRLELEDEWQFRLRDEFQTANSSDDKPLYFLTG
Sbjct: 1861 DLKKFKFLKGATLCVICQDRSSLRQTIVRLELEDEWQFRLRDEFQTANSSDDKPLYFLTG 1920
Query: 1921 RHV 1923
RHV
Sbjct: 1921 RHV 1923
>gi|23397642 GREB1 protein isoform a [Homo sapiens]
Length = 1949
Score = 1858 bits (4814), Expect = 0.0
Identities = 1011/1992 (50%), Positives = 1313/1992 (65%), Gaps = 112/1992 (5%)
Query: 1 MGNSYAGQLKSARFEEALHNSIEASLRCSSVVPRPIFSQLYLDPDQHPFSSADVKPKVED 60
MGNSYAGQLK+ RFEE LHNSIEASLR +++VPRPIFSQLYL+ +Q
Sbjct: 1 MGNSYAGQLKTTRFEEVLHNSIEASLRSNNLVPRPIFSQLYLEAEQ-------------- 46
Query: 61 LDKDLVNRYTQNGSLDFSNNLTVNEMEDDEDDEEMSDSNSPPIPYSQKPAPEGSCTTDGF 120
Q +L+ + V+ E++E+ E ++N PP P+ P PEG CTTDGF
Sbjct: 47 ----------QLAALEGGSR--VDNEEEEEEGEGGLETNGPPNPFQLHPLPEGCCTTDGF 94
Query: 121 CQAGKDLRLVSLCMEQIDIPAGFLLVGAKSPNLPEHILVCAVDKRFLPDDHGKNALLGFS 180
CQAGKDLRLVS+ E +D+PAGFLLVG KSP+LP+H+LVCAVDKRFLPDD+G NALLGFS
Sbjct: 95 CQAGKDLRLVSISNEPMDVPAGFLLVGVKSPSLPDHLLVCAVDKRFLPDDNGHNALLGFS 154
Query: 181 GNCIGCGERGFRYFTEFSNHINLKLTTQPKKQKHLKYYLVRSSQGVLSKGPLICWK--EC 238
GNC+GCG++GF YFTEFSNHINLKLTTQPKKQKHLKYYLVR++QG L+KGPLICWK E
Sbjct: 155 GNCVGCGKKGFCYFTEFSNHINLKLTTQPKKQKHLKYYLVRNAQGTLTKGPLICWKGSEF 214
Query: 239 RSRQSSASCHSIKPSSSVSSTVT----PENGTTNGYKSGFTQT---------DAANGNSS 285
RSRQ AS S ++ ST P GT G Q +AA G +
Sbjct: 215 RSRQIPASTCSSSLFPALESTAAFPSEPVPGTNPSILMGAQQAGPASDHPSLNAAMGPAV 274
Query: 286 HGGKGSASSSTPAHTGNYSLSPRPSYASGDQATMFISGPPKKRHRGWYPGSPLPQPGLVV 345
GK S A +L PRPS + SGPPKKRH+GW P SP G
Sbjct: 275 FNGKDSPKCQQLAKNNLLAL-PRPSAL----GILSNSGPPKKRHKGWSPESPSAPDGGCP 329
Query: 346 PVPTVRPLSRTEPLLSAPVPQTPLTG---ILQPRPIPAGETVIVPENLLSNSGVRPVILI 402
R ++ E + VPQ L G + P + +GE V VP+NLL +PVI
Sbjct: 330 QGGGNR--AKYESAGMSCVPQVGLVGPASVTFP-VVASGEPVSVPDNLLKICKAKPVIFK 386
Query: 403 GYGTLPYFYGNVGDIVVSPLLVNCYKIPQLENKDLEKLGLTGSQFLSVENMILLTIQYLV 462
G+G PY GN+ D+VVSPLL CY+ Q ++ E+ G + Q +S E +LLT+ YLV
Sbjct: 387 GHGNFPYLCGNLNDVVVSPLLYTCYQNSQSVSRAYEQYGASAIQPISEEMQLLLTVYYLV 446
Query: 463 RLGPDQVPLREEFEQIMLKAMQEFTLRE-RALQ---------IGAQCVPVSPGQLPWLAR 512
+L DQVPL E+ EQI L++ +E L E R Q + PV+ QLPWLA
Sbjct: 447 QLAADQVPLMEDLEQIFLRSWRESHLTEIRQYQQAPPQPFPPAPSAAAPVTSAQLPWLAS 506
Query: 513 LIASVSQDLVHVVVTQNSLAEGISETLRTLSEMRHYQRLPDYVVVICASKIRGNEFCVVV 572
L AS D VHV+ SLAEG+SE R L E + + +YVV+ICA + + C+ V
Sbjct: 507 LAASSCNDSVHVIECAYSLAEGLSEMFRLLVEGKLAK--TNYVVIICACRSAAIDSCIAV 564
Query: 573 LGQHQSRALAESMLTTSEFLKEISYELITGKVSFLASHFKTTSLGDDLDKLLEKMQQRRG 632
G++Q+R L+ES+LT +E+ KE++YEL+TGKV L + F T D+D LL+K Q
Sbjct: 565 TGKYQARILSESLLTPAEYQKEVNYELVTGKVDSLGAFFSTLCPEGDIDILLDKFHQENQ 624
Query: 633 DSVVTPFDGDLNECVSPQEAAAMIPTQNLDLDNETFHIYQPQLTVARKLLSQVCAIADSG 692
+ + + + + + +L+ + + QL VA+KLLS VC+IADS
Sbjct: 625 GHISSSLAASSVTKAASLDVSGTPVCTSYNLEPHSIRPF--QLAVAQKLLSHVCSIADSS 682
Query: 693 SQSLDLGHFSKVDFIIIVPRSEVLVQQTLQRIRQSGVLVDLGLEENGTAHQRAEKYVVRL 752
+Q+LDLG F KVDF+I +P SEV QQTL + SGVL++LGL++ QR E+YV++L
Sbjct: 683 TQNLDLGSFEKVDFLICIPPSEVTYQQTLLHVWHSGVLLELGLKKEHMTKQRVEQYVLKL 742
Query: 753 DNEIQTKFEVFMRRVKQNPYTLFVLVHDNSHVEL-TSVISGSLSHSEPSHGLADRVINCR 811
D E QTKF+ F++ QNP+TLFVL+HD++H +L +S + S S+PS GL DR++NCR
Sbjct: 743 DTEAQTKFKAFLQNSFQNPHTLFVLIHDHAHWDLVSSTVHNLYSQSDPSVGLVDRLLNCR 802
Query: 812 EVLEAFNLLVLQVSSFPYTLQTQQSRISSSNEVHW-IQLDTGEDVGCEEKLYFGLSEYSK 870
EV EA N++ L V+SFPY LQTQ + IS NE+HW G D+ E K YFGLSE+ +
Sbjct: 803 EVKEAPNIVTLHVTSFPYALQTQHTLISPYNEIHWPASCSNGVDLYHENKKYFGLSEFIE 862
Query: 871 SLQWGITSPLLRCDETFEKMVNTLLERYPRLHSMVVRCYLLIQQYSEALMALTTMASLRD 930
S G + PLLR D +FE MV L +R+PRLHS V+R ++L+Q Y+ ALMA++ + +++
Sbjct: 863 STLSGHSLPLLRYDSSFEAMVTALGKRFPRLHSAVIRTFVLVQHYAAALMAVSGLPQMKN 922
Query: 931 HSTPETLSIMDDLISSPGKNKSGRGHMLIIRVPSVQLAMLAKERLQEVRDKLGLQYRFEI 990
+++ ETL I +L++SP + G G M+++RVP LA++A ERL VR +L L+ FEI
Sbjct: 923 YTSVETLEITQNLLNSPKQCPCGHGLMVLLRVPCSPLAVVAYERLAHVRARLALEEHFEI 982
Query: 991 ILGNPATELSVATHFVARLKSWRGNEPEEWIPRTYQDLDGLPCIVILTGKDPLGETFPRS 1050
ILG+P++ ++V HFV +L+ W+ E EW P+TY +L+GLPCI+I +G DP GE+ PRS
Sbjct: 983 ILGSPSSGVTVGKHFVKQLRMWQKIEDVEWRPQTYLELEGLPCILIFSGMDPHGESLPRS 1042
Query: 1051 LKYCDLRLIDSSYLTRTALEQEVGLACCYVSKEVIRGPTVALDLSGKEQERAAVSENDSD 1110
L+YCDLRLI+SS L RTALEQE+GLA +VS EV + + E+ + ++N+ +
Sbjct: 1043 LRYCDLRLINSSCLVRTALEQELGLAAYFVSNEVPLEKGARNEALESDAEKLSSTDNEDE 1102
Query: 1111 EL-----------LIDLERPQSNSSAVTG----TSGSIMENGVSSSSTADKSQKQSLTPS 1155
EL + ER +S+ SA + SGS + S+ TA + + +P
Sbjct: 1103 ELGTEGSTSEKRSPMKRERSRSHDSASSSLSSKASGSALGGESSAQPTALPQGEHARSPQ 1162
Query: 1156 FQSPATS---------LGLDEGVSASSAGAGAGETLKQECDSLGPQMA-----------S 1195
+ PA +G ++ + G T + +C Q +
Sbjct: 1163 PRGPAEEGRAPGEKQRPRASQGPPSAISRHSPGPTPQPDCSLRTGQRSVQVSVTSSCSQL 1222
Query: 1196 STTSKPSSSSSGPRTLPWPGQPIRGCRGPQAALPPVVILSKAAYSLLGSQKSGKLPSSSS 1255
S++S SSSS P W Q + PP+V L K Y ++ S S LP ++S
Sbjct: 1223 SSSSGSSSSSVAPAAGTWVLQASQCSLTKACRQPPIVFLPKLVYDMVVSTDSSGLPKAAS 1282
Query: 1256 LLPHADVAWVSSLRPLLNKDMSSEEQSLYYRQWTLARQHHADYSNQLDPASGTRNFHPRR 1315
LLP V W SS RPLL+K M+S EQSLYYRQWT+ R H DY N+ + FHPRR
Sbjct: 1283 LLPSPSVMWASSFRPLLSKTMTSTEQSLYYRQWTVPRPSHMDYGNRAE--GRVDGFHPRR 1340
Query: 1316 LLLTGPPQVGKTGSYLQFLRILFRMLIRLLEVDVYDEEEINTDHNESSEVSQSE-GEPWP 1374
LLL+GPPQ+GKTG+YLQFL +L RML+RL EVDVYDEEEIN + E S+ + +PWP
Sbjct: 1341 LLLSGPPQIGKTGAYLQFLSVLSRMLVRLTEVDVYDEEEININLREESDWHYLQLSDPWP 1400
Query: 1375 DIESFSKMPFDVSVHDPKYSLMSLVYTEKLAGVKQEVIKESKVEEPR--KRETVSIMLTK 1432
D+E F K+PFD +HDPKY SL+ + G+K E S+ E +R+T + L+K
Sbjct: 1401 DLELFKKLPFDYIIHDPKYEDASLICSH-YQGIKSEDRGMSRKPEDLYVRRQTARMRLSK 1459
Query: 1433 YAAYNTFHHCEQCRQYMDFTSASQMSDSTLHAFTFSSSMLGEEVQLYFIIPKSKESHFVF 1492
YAAYNT+HHCEQC QYM F Q+ +STLHAF FS SMLGEE+QL+FIIPKSKE HFVF
Sbjct: 1460 YAAYNTYHHCEQCHQYMGFHPRYQLYESTLHAFAFSYSMLGEEIQLHFIIPKSKEHHFVF 1519
Query: 1493 SKQGKHLESMRLPLVSDKNLNAVKSPIFTPSSGRHEHGLLNLFHAMEGISHLHLLVVKEY 1552
S+ G LESMRLPLV+DK+ +KSP FTP++GRHEHGL NL+HAM+G SHLH+LVVKEY
Sbjct: 1520 SQPGGQLESMRLPLVTDKSHEYIKSPTFTPTTGRHEHGLFNLYHAMDGASHLHVLVVKEY 1579
Query: 1553 EMPLYRKYWPNHIMLVLPGMFNNAGVGAARFLIKELSYHNLELERNRLEELGIKRQCVWP 1612
EM +Y+KYWPNHIMLVLP +FN+AGVGAA FLIKELSYHNLELERNR EELGIK Q +WP
Sbjct: 1580 EMAIYKKYWPNHIMLVLPSIFNSAGVGAAHFLIKELSYHNLELERNRQEELGIKPQDIWP 1639
Query: 1613 FIVMMDDSCVLWNIHSVQEPSSQPMEVGVSSKNVSLKTVLQHIEATPKIVHYAILGIQKW 1672
FIV+ DDSCV+WN+ V + E S +NVSLK ++QHIEA P I+HYA+LG++KW
Sbjct: 1640 FIVISDDSCVMWNVVDVNSAGERSREFSWSERNVSLKHIMQHIEAAPDIMHYALLGLRKW 1699
Query: 1673 SSKLTSQSLKAPFSRCHVHDFILLNTDLTQNVQYDFNRYFCEDADFNLRTNSSGLLICRF 1732
SSK + ++ PFSRCHVH+FI+LN DLTQNVQY+ NR+ C+D DFNLR +S+GLL+CRF
Sbjct: 1700 SSKTRASEVQEPFSRCHVHNFIILNVDLTQNVQYNQNRFLCDDVDFNLRVHSAGLLLCRF 1759
Query: 1733 NNFSLMKKHVQVGGQRDFIIKPKIMVSESLAPILPLQYICAPDSEHTLLAAPAQFLLEKF 1792
N FS+MKK + VGG R F I K VS++ A ++P QYICAPDS+HT LAAPAQ LLEKF
Sbjct: 1760 NRFSVMKKQIVVGGHRSFHITSK--VSDNSAAVVPAQYICAPDSKHTFLAAPAQLLLEKF 1817
Query: 1793 LQHASYKLFPKAIHNFRSPVLAIDCYLNIGPEVAICYISSRPHSSNVNCEGVFFSGLLLY 1852
LQH S+ FP ++ N PVL++DCYLN+G ++++CY+SSRPHS N++C + FSGLLLY
Sbjct: 1818 LQHHSHLFFPLSLKNHDHPVLSVDCYLNLGSQISVCYVSSRPHSLNISCSDLLFSGLLLY 1877
Query: 1853 LCDSFVGAD-LKKFKFLKGATLCVICQDRSSLRQTIVRLELEDEWQFRLRDEFQTANSSD 1911
LCDSFVGA LKKF FLKGATLCVICQDRSSLRQT+VRLELEDEWQFRLRDEFQTAN+ +
Sbjct: 1878 LCDSFVGASFLKKFHFLKGATLCVICQDRSSLRQTVVRLELEDEWQFRLRDEFQTANARE 1937
Query: 1912 DKPLYFLTGRHV 1923
D+PL+FLTGRH+
Sbjct: 1938 DRPLFFLTGRHI 1949
>gi|23397644 GREB1 protein isoform b [Homo sapiens]
Length = 457
Score = 407 bits (1047), Expect = e-113
Identities = 240/482 (49%), Positives = 296/482 (61%), Gaps = 52/482 (10%)
Query: 1 MGNSYAGQLKSARFEEALHNSIEASLRCSSVVPRPIFSQLYLDPDQHPFSSADVKPKVED 60
MGNSYAGQLK+ RFEE LHNSIEASLR +++VPRPIFSQLYL+ +Q
Sbjct: 1 MGNSYAGQLKTTRFEEVLHNSIEASLRSNNLVPRPIFSQLYLEAEQ-------------- 46
Query: 61 LDKDLVNRYTQNGSLDFSNNLTVNEMEDDEDDEEMSDSNSPPIPYSQKPAPEGSCTTDGF 120
Q +L+ + V+ E++E+ E ++N PP P+ P PEG CTTDGF
Sbjct: 47 ----------QLAALEGGSR--VDNEEEEEEGEGGLETNGPPNPFQLHPLPEGCCTTDGF 94
Query: 121 CQAGKDLRLVSLCMEQIDIPAGFLLVGAKSPNLPEHILVCAVDKRFLPDDHGKNALLGFS 180
CQAGKDLRLVS+ E +D+PAGFLLVG KSP+LP+H+LVCAVDKRFLPDD+G NALLGFS
Sbjct: 95 CQAGKDLRLVSISNEPMDVPAGFLLVGVKSPSLPDHLLVCAVDKRFLPDDNGHNALLGFS 154
Query: 181 GNCIGCGERGFRYFTEFSNHINLKLTTQPKKQKHLKYYLVRSSQGVLSKGPLICWK--EC 238
GNC+GCG++GF YFTEFSNHINLKLTTQPKKQKHLKYYLVR++QG L+KGPLICWK E
Sbjct: 155 GNCVGCGKKGFCYFTEFSNHINLKLTTQPKKQKHLKYYLVRNAQGTLTKGPLICWKGSEF 214
Query: 239 RSRQSSASCHSIKPSSSVSSTVT----PENGTTNGYKSGFTQT---------DAANGNSS 285
RSRQ AS S ++ ST P GT G Q +AA G +
Sbjct: 215 RSRQIPASTCSSSLFPALESTAAFPSEPVPGTNPSILMGAQQAGPASDHPSLNAAMGPAV 274
Query: 286 HGGKGSASSSTPAHTGNYSLSPRPSYASGDQATMFISGPPKKRHRGWYPGSPLPQPGLVV 345
GK S A +L PRPS + SGPPKKRH+GW P SP G
Sbjct: 275 FNGKDSPKCQQLAKNNLLAL-PRPSAL----GILSNSGPPKKRHKGWSPESPSAPDGGCP 329
Query: 346 PVPTVRPLSRTEPLLSAPVPQTPLTG---ILQPRPIPAGETVIVPENLLSNSGVRPVILI 402
R ++ E + VPQ L G + P + +GE V VP+NLL +PVI
Sbjct: 330 QGGGNR--AKYESAGMSCVPQVGLVGPASVTFP-VVASGEPVSVPDNLLKICKAKPVIFK 386
Query: 403 GYGTLPYFYGNVGDIVVSPLLVNCYKIPQLENKDLEKLGLTGSQFLSVENMILLTIQYLV 462
G+G PY GN+ D+VVSPLL CY+ Q ++ E+ G + Q +S E +LLT+ YLV
Sbjct: 387 GHGNFPYLCGNLNDVVVSPLLYTCYQNSQSVSRAYEQYGASAIQPISEEMQLLLTVYYLV 446
Query: 463 RL 464
+L
Sbjct: 447 QL 448
>gi|116734676 GREB1 protein isoform c [Homo sapiens]
Length = 409
Score = 354 bits (908), Expect = 5e-97
Identities = 212/418 (50%), Positives = 256/418 (61%), Gaps = 52/418 (12%)
Query: 1 MGNSYAGQLKSARFEEALHNSIEASLRCSSVVPRPIFSQLYLDPDQHPFSSADVKPKVED 60
MGNSYAGQLK+ RFEE LHNSIEASLR +++VPRPIFSQLYL+ +Q
Sbjct: 1 MGNSYAGQLKTTRFEEVLHNSIEASLRSNNLVPRPIFSQLYLEAEQ-------------- 46
Query: 61 LDKDLVNRYTQNGSLDFSNNLTVNEMEDDEDDEEMSDSNSPPIPYSQKPAPEGSCTTDGF 120
Q +L+ + V+ E++E+ E ++N PP P+ P PEG CTTDGF
Sbjct: 47 ----------QLAALEGGSR--VDNEEEEEEGEGGLETNGPPNPFQLHPLPEGCCTTDGF 94
Query: 121 CQAGKDLRLVSLCMEQIDIPAGFLLVGAKSPNLPEHILVCAVDKRFLPDDHGKNALLGFS 180
CQAGKDLRLVS+ E +D+PAGFLLVG KSP+LP+H+LVCAVDKRFLPDD+G NALLGFS
Sbjct: 95 CQAGKDLRLVSISNEPMDVPAGFLLVGVKSPSLPDHLLVCAVDKRFLPDDNGHNALLGFS 154
Query: 181 GNCIGCGERGFRYFTEFSNHINLKLTTQPKKQKHLKYYLVRSSQGVLSKGPLICWK--EC 238
GNC+GCG++GF YFTEFSNHINLKLTTQPKKQKHLKYYLVR++QG L+KGPLICWK E
Sbjct: 155 GNCVGCGKKGFCYFTEFSNHINLKLTTQPKKQKHLKYYLVRNAQGTLTKGPLICWKGSEF 214
Query: 239 RSRQSSASCHSIKPSSSVSSTVT----PENGTTNGYKSGFTQT---------DAANGNSS 285
RSRQ AS S ++ ST P GT G Q +AA G +
Sbjct: 215 RSRQIPASTCSSSLFPALESTAAFPSEPVPGTNPSILMGAQQAGPASDHPSLNAAMGPAV 274
Query: 286 HGGKGSASSSTPAHTGNYSLSPRPSYASGDQATMFISGPPKKRHRGWYPGSPLPQPGLVV 345
GK S A +L PRPS + SGPPKKRH+GW P SP G
Sbjct: 275 FNGKDSPKCQQLAKNNLLAL-PRPSAL----GILSNSGPPKKRHKGWSPESPSAPDGGCP 329
Query: 346 PVPTVRPLSRTEPLLSAPVPQTPLTG---ILQPRPIPAGETVIVPENLLSNSGVRPVI 400
R ++ E + VPQ L G + P + +GE V VP+NLL +PVI
Sbjct: 330 QGGGNR--AKYESAGMSCVPQVGLVGPASVTFP-VVASGEPVSVPDNLLKICKAKPVI 384
>gi|57864582 hornerin [Homo sapiens]
Length = 2850
Score = 44.7 bits (104), Expect = 9e-04
Identities = 24/77 (31%), Positives = 40/77 (51%)
Query: 253 SSSVSSTVTPENGTTNGYKSGFTQTDAANGNSSHGGKGSASSSTPAHTGNYSLSPRPSYA 312
SSS S+ ++G+ +G+ SG+ Q + +G SS G + +SS + +H G + R S
Sbjct: 2582 SSSGQSSSYSQHGSGSGHSSGYGQHGSRSGQSSRGERHGSSSGSSSHYGQHGSGSRQSSG 2641
Query: 313 SGDQATMFISGPPKKRH 329
G Q + P + RH
Sbjct: 2642 HGRQGSGSGQSPSRGRH 2658
Score = 44.3 bits (103), Expect = 0.001
Identities = 24/77 (31%), Positives = 40/77 (51%)
Query: 253 SSSVSSTVTPENGTTNGYKSGFTQTDAANGNSSHGGKGSASSSTPAHTGNYSLSPRPSYA 312
SSS S+ ++G+ +G+ SG+ Q + +G SS G + +SS + +H G + R S
Sbjct: 1172 SSSGQSSSYSQHGSGSGHSSGYGQHGSRSGQSSRGERHGSSSGSSSHYGQHGSGSRQSSG 1231
Query: 313 SGDQATMFISGPPKKRH 329
G Q + P + RH
Sbjct: 1232 HGRQGSGSGHSPSRGRH 1248
Score = 41.2 bits (95), Expect = 0.010
Identities = 23/77 (29%), Positives = 39/77 (50%)
Query: 253 SSSVSSTVTPENGTTNGYKSGFTQTDAANGNSSHGGKGSASSSTPAHTGNYSLSPRPSYA 312
SSS S+ ++G+ +G+ SG+ Q + +G SS G + +SS + + G + R S
Sbjct: 1642 SSSGQSSSYSQHGSGSGHSSGYGQHGSRSGQSSRGERHGSSSRSSSRYGQHGSGSRQSSG 1701
Query: 313 SGDQATMFISGPPKKRH 329
G Q + P + RH
Sbjct: 1702 HGRQGSGSGQSPSRGRH 1718
Score = 41.2 bits (95), Expect = 0.010
Identities = 23/77 (29%), Positives = 39/77 (50%)
Query: 253 SSSVSSTVTPENGTTNGYKSGFTQTDAANGNSSHGGKGSASSSTPAHTGNYSLSPRPSYA 312
SSS S+ ++G+ +G+ SG+ Q + +G SS G + +SS + + G + R S
Sbjct: 2112 SSSGQSSSYSQHGSGSGHSSGYGQHGSRSGQSSRGERHGSSSGSSSRYGQHGSGSRQSSG 2171
Query: 313 SGDQATMFISGPPKKRH 329
G Q + P + RH
Sbjct: 2172 HGRQGSGSGHSPSRGRH 2188
Score = 40.8 bits (94), Expect = 0.013
Identities = 26/90 (28%), Positives = 42/90 (46%)
Query: 240 SRQSSASCHSIKPSSSVSSTVTPENGTTNGYKSGFTQTDAANGNSSHGGKGSASSSTPAH 299
S +S S SSS S+ ++G+ +G+ SG+ Q + +G SS G + +SS + +
Sbjct: 223 SGSGQSSGFSQHKSSSGQSSGYSQHGSGSGHSSGYGQHGSRSGQSSRGERHRSSSGSSSS 282
Query: 300 TGNYSLSPRPSYASGDQATMFISGPPKKRH 329
G + R S G Q + P RH
Sbjct: 283 YGQHGSGSRQSLGHGRQGSGSRQSPSHVRH 312
Score = 36.6 bits (83), Expect = 0.24
Identities = 31/95 (32%), Positives = 45/95 (47%), Gaps = 4/95 (4%)
Query: 236 KECRSRQSSASCHSIKPSSSVSSTVTPENGTTNGYKSGFTQTDAANG-NSSHGGKGSASS 294
+E RS QSS + SSS S+ ++G+T+G S Q A++G +SSHG GS SS
Sbjct: 1053 RESRSGQSSG--YGQHGSSSGHSSTHGQHGSTSGQSSSCGQHGASSGQSSSHGQHGSGSS 1110
Query: 295 STPAHTGNYSLSPRPSYASGDQATMFISGPPKKRH 329
+ + G S G + + P RH
Sbjct: 1111 QSSGY-GRQGSGSGQSPGHGQRGSGSRQSPSYGRH 1144
Score = 36.6 bits (83), Expect = 0.24
Identities = 31/95 (32%), Positives = 45/95 (47%), Gaps = 4/95 (4%)
Query: 236 KECRSRQSSASCHSIKPSSSVSSTVTPENGTTNGYKSGFTQTDAANG-NSSHGGKGSASS 294
+E RS QSS + SSS S+ ++G+T+G S Q A++G +SSHG GS SS
Sbjct: 1523 RESRSGQSSG--YGQHGSSSGHSSTHGQHGSTSGQSSSCGQHGASSGQSSSHGQHGSGSS 1580
Query: 295 STPAHTGNYSLSPRPSYASGDQATMFISGPPKKRH 329
+ + G S G + + P RH
Sbjct: 1581 QSSGY-GRQGSGSGQSPGHGQRGSGSRQSPSYGRH 1614
Score = 36.6 bits (83), Expect = 0.24
Identities = 31/95 (32%), Positives = 45/95 (47%), Gaps = 4/95 (4%)
Query: 236 KECRSRQSSASCHSIKPSSSVSSTVTPENGTTNGYKSGFTQTDAANG-NSSHGGKGSASS 294
+E RS QSS + SSS S+ ++G+T+G S Q A++G +SSHG GS SS
Sbjct: 2463 RESRSGQSSG--YGQHGSSSGHSSTHGQHGSTSGQSSSCGQHGASSGQSSSHGQHGSGSS 2520
Query: 295 STPAHTGNYSLSPRPSYASGDQATMFISGPPKKRH 329
+ + G S G + + P RH
Sbjct: 2521 QSSGY-GRQGSGSGQSPGHGQRGSGSRQSPSYGRH 2554
Score = 34.7 bits (78), Expect = 0.92
Identities = 25/62 (40%), Positives = 35/62 (56%), Gaps = 3/62 (4%)
Query: 236 KECRSRQSSASCHSIKPSSSVSSTVTPENGTTNGYKSGFTQTDAANG-NSSHGGKGSASS 294
+E RS QSS + SSS S+ ++G+T+G S Q A +G +SSHG GS SS
Sbjct: 587 QESRSGQSSG--YGQHGSSSGHSSTHGQHGSTSGQSSSCGQHGATSGQSSSHGQHGSGSS 644
Query: 295 ST 296
+
Sbjct: 645 QS 646
Score = 34.7 bits (78), Expect = 0.92
Identities = 25/88 (28%), Positives = 39/88 (44%), Gaps = 4/88 (4%)
Query: 235 WKECRSRQSSASCHSI----KPSSSVSSTVTPENGTTNGYKSGFTQTDAANGNSSHGGKG 290
W R S S HS + S S S+ ++G+++G+ S Q +A+G SS G+
Sbjct: 1973 WSSSRGPYESGSGHSSGLGHRESRSGQSSGYGQHGSSSGHSSTHGQHGSASGQSSSCGQH 2032
Query: 291 SASSSTPAHTGNYSLSPRPSYASGDQAT 318
ASS + G + S G Q +
Sbjct: 2033 GASSGQSSSHGQHGSGSSQSSGYGRQGS 2060
Score = 33.1 bits (74), Expect = 2.7
Identities = 28/102 (27%), Positives = 45/102 (44%), Gaps = 6/102 (5%)
Query: 228 SKGPLICWKECRSRQSSASCHSIKPSSSVSSTVTPENGTTNGYKSGFTQTDAANGNSSHG 287
S+GP E S SS H + S S S+ ++G+++G+ S Q + +G SS
Sbjct: 570 SRGPY----ESGSGHSSGLGH--QESRSGQSSGYGQHGSSSGHSSTHGQHGSTSGQSSSC 623
Query: 288 GKGSASSSTPAHTGNYSLSPRPSYASGDQATMFISGPPKKRH 329
G+ A+S + G + S G Q + P + RH
Sbjct: 624 GQHGATSGQSSSHGQHGSGSSQSSRYGQQGSGSGQSPSRGRH 665
Score = 32.3 bits (72), Expect = 4.6
Identities = 28/89 (31%), Positives = 42/89 (47%), Gaps = 13/89 (14%)
Query: 236 KECRSRQSS-----------ASCHSIKPSSSVSSTVTPENGTTNGYKSGFTQTDAANGNS 284
+E RS QSS +S H S+S S+ ++G ++G S Q + + S
Sbjct: 1993 RESRSGQSSGYGQHGSSSGHSSTHGQHGSASGQSSSCGQHGASSGQSSSHGQHGSGSSQS 2052
Query: 285 S-HGGKGSASSSTPAHTGNYSLSPR-PSY 311
S +G +GS S +P H S S + PSY
Sbjct: 2053 SGYGRQGSGSGQSPGHGQRGSGSRQSPSY 2081
Score = 31.6 bits (70), Expect = 7.8
Identities = 26/102 (25%), Positives = 43/102 (42%), Gaps = 7/102 (6%)
Query: 237 ECRSRQSSASCHSIKPSSSVSSTVTPENGTTNGYKSGFTQTDAANGNSS----HGGKGSA 292
+C S + + S S S+ +G+ +G SGF+Q +++G SS HG
Sbjct: 194 QCGSGSGQSPNYGQHGSGSGQSSSNDTHGSGSGQSSGFSQHKSSSGQSSGYSQHGSGSGH 253
Query: 293 SSSTPAH---TGNYSLSPRPSYASGDQATMFISGPPKKRHRG 331
SS H +G S R +SG ++ G ++ G
Sbjct: 254 SSGYGQHGSRSGQSSRGERHRSSSGSSSSYGQHGSGSRQSLG 295
Score = 31.6 bits (70), Expect = 7.8
Identities = 30/95 (31%), Positives = 41/95 (43%), Gaps = 11/95 (11%)
Query: 240 SRQSSASCHSIKPSSSVSSTVTPENGTTNGYKSGFTQTDAANGNSS----HGGKGSASSS 295
S QSS H K SS SS T ++G+ +G+ S + Q + +G SS HG +SSS
Sbjct: 926 SGQSSGFGH--KSSSGQSSGYT-QHGSGSGHSSSYEQHGSRSGQSSRSEQHGSSSGSSSS 982
Query: 296 TPAHTGNYSLSPRPSYASGDQATMFISGPPKKRHR 330
G + R S G + P R R
Sbjct: 983 ----YGQHGSGSRQSLGHGQHGSGSGQSPSPSRGR 1013
>gi|8923106 zinc finger, CCHC domain containing 10 [Homo sapiens]
Length = 170
Score = 42.4 bits (98), Expect = 0.004
Identities = 35/121 (28%), Positives = 55/121 (45%), Gaps = 7/121 (5%)
Query: 1089 TVALDLSGKEQERAAVSENDSDELLIDLERPQSNSSAVTGTSGSIMENGVSSSSTADKSQ 1148
T L + KE+E + + E ++ + + S +VT +S S SS S+A S
Sbjct: 49 TAELKKALKEKENRLLLQQSIGETNVERKAKKKRSKSVTSSSSS------SSDSSASDSS 102
Query: 1149 KQSLTPSFQSPATSLGLDEGVSASSAGAGA-GETLKQECDSLGPQMASSTTSKPSSSSSG 1207
+S S S + DE S+SS+ A + + + DS +SS+TS SSS
Sbjct: 103 SESEETSTSSSSEDSDTDESSSSSSSSASSTTSSSSSDSDSDSSSSSSSSTSTDSSSDDE 162
Query: 1208 P 1208
P
Sbjct: 163 P 163
>gi|148612809 WNK lysine deficient protein kinase 1 [Homo sapiens]
Length = 2382
Score = 41.2 bits (95), Expect = 0.010
Identities = 47/163 (28%), Positives = 73/163 (44%), Gaps = 24/163 (14%)
Query: 1133 IMENGVSSSSTADKSQKQSLTPSFQSPATSLGLDEGVSASSAGAGAGETLKQECDSLGPQ 1192
+ + S++ S T SF S A+ L + +S+S++ ET+ SL
Sbjct: 1475 VSQQAAGSTTVGATLTSVSTTTSFPSTASQLSIQ--LSSSTSTPTLAETVVVSAHSLDKT 1532
Query: 1193 MASSTT------SKPSSSSSGPRTLPWPGQPIRGCRGPQAALPPVVILSKAAYSLLGSQK 1246
SSTT S PSSSSS PG + L P+VI S A + + Q
Sbjct: 1533 SHSSTTGLAFSLSAPSSSSS-------PGAGVSSYISQPGGLHPLVIPSVIASTPILPQA 1585
Query: 1247 SGKLPSSSSLLPHADVAWVSSLRPLLN--KDMSSEEQSLYYRQ 1287
+G P+S+ LLP V S+ PL+ ++ + +Q+L + Q
Sbjct: 1586 AG--PTSTPLLPQ-----VPSIPPLVQPVANVPAVQQTLIHSQ 1621
>gi|169658378 trinucleotide repeat containing 18 [Homo sapiens]
Length = 2968
Score = 40.4 bits (93), Expect = 0.017
Identities = 42/155 (27%), Positives = 62/155 (40%), Gaps = 17/155 (10%)
Query: 1122 NSSAVTGTSGSIMENGVSSSSTADKSQKQSLTPSFQSPATSLGLDEGVSASSAGAGAGET 1181
N SA + + S + SSSS++ S S + S S ++S S+SS+ + + +
Sbjct: 2601 NCSAASSRAASPASSSSSSSSSSSSSSSSSSSSSSSSSSSS----SSSSSSSSSSSSSSS 2656
Query: 1182 LKQECDSLGPQMASSTTSKPSSSSSGPRTLPWPGQPIRGCRGP--QAALPPVVILSKAAY 1239
S +SSTT + SS SS P P GP QAALP +KA
Sbjct: 2657 SSSSSSSSSSSSSSSTTDEDSSCSSDDEAAPAP------TAGPSAQAALP-----TKATK 2705
Query: 1240 SLLGSQKSGKLPSSSSLLPHADVAWVSSLRPLLNK 1274
++ S P + P +PL K
Sbjct: 2706 QAGKARPSAHSPGKKTPAPQPQAPPPQPTQPLQPK 2740
Score = 38.5 bits (88), Expect = 0.064
Identities = 35/146 (23%), Positives = 59/146 (40%), Gaps = 17/146 (11%)
Query: 221 RSSQGVLSKGPLICWKECRSRQSSASCHSIKPSSSVSSTVTPENGTTNGYKSGFTQTDAA 280
++ G G C S AS S SSS SS+ + + +++ S + + ++
Sbjct: 2589 KNGDGGCGTGGRNCSAASSRAASPASSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS 2648
Query: 281 NGNSSHGGKGSASSSTPAHTGNYSLSPRPSYASGDQATMFISGPP--------------- 325
+ +SS S+SSS+ + + + + S +S D+A + P
Sbjct: 2649 SSSSSSSSSSSSSSSSSSSSSSSTTDEDSSCSSDDEAAPAPTAGPSAQAALPTKATKQAG 2708
Query: 326 KKRHRGWYPG--SPLPQPGLVVPVPT 349
K R PG +P PQP P PT
Sbjct: 2709 KARPSAHSPGKKTPAPQPQAPPPQPT 2734
Score = 35.0 bits (79), Expect = 0.71
Identities = 29/92 (31%), Positives = 37/92 (40%), Gaps = 3/92 (3%)
Query: 1115 DLERPQSNSSAVTGTSGSIMENGVSSSSTADKSQKQSLTPSFQSPATSLGLDEGVSASSA 1174
D P+S A G+ SSSS+ S S S S + + G +EG
Sbjct: 2537 DSGNPKSPDKAQAEQDGAEESESSSSSSSGSSSSSSS---SSSSGSETEGEEEGDKNGDG 2593
Query: 1175 GAGAGETLKQECDSLGPQMASSTTSKPSSSSS 1206
G G G S ASS++S SSSSS
Sbjct: 2594 GCGTGGRNCSAASSRAASPASSSSSSSSSSSS 2625
Score = 33.9 bits (76), Expect = 1.6
Identities = 36/122 (29%), Positives = 51/122 (41%), Gaps = 5/122 (4%)
Query: 1101 RAAVSENDSDELLIDLERPQSNSSAVTGTSGSIMENGVSSSSTADKSQKQSLTPSFQSPA 1160
RAA + S S+SS+ + +S S + SSSS++ S S + S S +
Sbjct: 2608 RAASPASSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS 2667
Query: 1161 TSLG-LDEGVSASSAG-AGAGETLKQECDSLGPQMASSTTSK--PSSSSSGPRT-LPWPG 1215
+S DE S SS A T + P A+ K PS+ S G +T P P
Sbjct: 2668 SSSSTTDEDSSCSSDDEAAPAPTAGPSAQAALPTKATKQAGKARPSAHSPGKKTPAPQPQ 2727
Query: 1216 QP 1217
P
Sbjct: 2728 AP 2729
Score = 32.0 bits (71), Expect = 6.0
Identities = 30/122 (24%), Positives = 58/122 (47%), Gaps = 12/122 (9%)
Query: 1087 GPTVALDLSG--KEQERAAVSENDSDELLIDLERPQSNSSAVTGTSGSIMENGVSSSSTA 1144
GP + + SG K ++A ++ ++E +S+SS+ +G+S S + SSSS +
Sbjct: 2530 GPGLTFEDSGNPKSPDKAQAEQDGAEE-------SESSSSSSSGSSSS---SSSSSSSGS 2579
Query: 1145 DKSQKQSLTPSFQSPATSLGLDEGVSASSAGAGAGETLKQECDSLGPQMASSTTSKPSSS 1204
+ ++ + + G + ++S A + A + S +SS++S SSS
Sbjct: 2580 ETEGEEEGDKNGDGGCGTGGRNCSAASSRAASPASSSSSSSSSSSSSSSSSSSSSSSSSS 2639
Query: 1205 SS 1206
SS
Sbjct: 2640 SS 2641
>gi|118572613 splicing coactivator subunit SRm300 [Homo sapiens]
Length = 2752
Score = 40.4 bits (93), Expect = 0.017
Identities = 38/151 (25%), Positives = 60/151 (39%), Gaps = 19/151 (12%)
Query: 1099 QERAAVSENDSDELLIDLERPQSNSSAVTGTSGSIMENG------------VSSSSTADK 1146
+ER + S + S S+SS+ +G+S S E V S + A K
Sbjct: 2528 KERRSSSSSSSSSSSSSSSSSSSSSSSSSGSSSSDSEGSSLPVQPEVALKRVPSPTPAPK 2587
Query: 1147 SQKQSLTPSFQSPATSLGLDEGVSASSAGAGAGETLKQECDSLGPQMASSTTSKPSSSSS 1206
+ P +PA S+SS+ + + + S +SS++S SSSSS
Sbjct: 2588 EAVREGRPPEPTPAKRKRRSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS 2647
Query: 1207 -------GPRTLPWPGQPIRGCRGPQAALPP 1230
GP+ LP P P + G + + P
Sbjct: 2648 SPSPAKPGPQALPKPASPKKPPPGERRSRSP 2678
>gi|28372563 growth arrest-specific 2 like 3 [Homo sapiens]
Length = 694
Score = 39.7 bits (91), Expect = 0.029
Identities = 40/148 (27%), Positives = 66/148 (44%), Gaps = 17/148 (11%)
Query: 1118 RPQSNSSA-VTGTSGSIMENGVSSSSTADKSQKQSLTPSFQSPATSLGLDEGVSASSAGA 1176
+P SSA +T TS + G+ + S Q+ Q ++L L++ VS SS
Sbjct: 512 KPSFQSSAKMTKTSSKTIATGLGTQSQPSDGAPQAKPVPAQKLKSALNLNQPVSVSSVSP 571
Query: 1177 GAGETLKQECDSLGPQMASSTTSKPSSSSS----GPRTLPWPGQ-PIRGCRGPQA----- 1226
+K S + S+T +P + S+ GP +L PG+ P+ PQ+
Sbjct: 572 -----VKATQKSKDKNIVSATKKQPQNKSAFQKTGPSSLKSPGRTPLSIVSLPQSSTKTQ 626
Query: 1227 -ALPPVVILSKAAYSLLGSQKSGKLPSS 1253
A ++K+ +S G +SGK P+S
Sbjct: 627 TAPKSAQTVAKSQHSTKGPPRSGKTPAS 654
>gi|115430223 galectin 3 [Homo sapiens]
Length = 250
Score = 39.3 bits (90), Expect = 0.037
Identities = 41/127 (32%), Positives = 50/127 (39%), Gaps = 9/127 (7%)
Query: 279 AANGNSSHGGKGSASSSTPAHTGNYSLSPRPSYASGDQATMFISGPPKKRHRGWYPGSPL 338
+ +GN + G A + PA G Y P SY P + G YPG+P
Sbjct: 12 SGSGNPNPQGWPGAWGNQPAGAGGY---PGASYPGAYPGQAPPGAYPGQAPPGAYPGAPG 68
Query: 339 PQPGLVVPVPTVRPLSRTEPLLSAPVPQTPLTGILQ---PRPIPAGETVIVPENLLSNSG 395
PG P P V P + P Q TG P PAG +IVP NL G
Sbjct: 69 AYPG--APAPGVYPGPPSGPGAYPSSGQPSATGAYPATGPYGAPAG-PLIVPYNLPLPGG 125
Query: 396 VRPVILI 402
V P +LI
Sbjct: 126 VVPRMLI 132
>gi|14993776 skeletal myosin light chain kinase [Homo sapiens]
Length = 596
Score = 39.3 bits (90), Expect = 0.037
Identities = 41/129 (31%), Positives = 56/129 (43%), Gaps = 14/129 (10%)
Query: 1129 TSGSIMENGVSSSSTADKSQKQSLTPSFQSPATSLGLDEGVSASSAGAGAGETLKQECDS 1188
T +E G+ + ST DK+ K P+ + P + G D G A TLK++ +
Sbjct: 3 TENGAVELGIQNPST-DKAPKG---PTGERPLAA-GKDPG-PPDPKKAPDPPTLKKDAKA 56
Query: 1189 LGPQMASSTTSKPSSSSSGPR-TLPWPGQPIRGCRGPQAALP-------PVVILSKAAYS 1240
+ T ++PS+SS GP+ G P G GP AALP V KA
Sbjct: 57 PASEKGDGTLAQPSTSSQGPKGEGDRGGGPAEGSAGPPAALPQQTATPETSVKKPKAEQG 116
Query: 1241 LLGSQKSGK 1249
GSQ GK
Sbjct: 117 ASGSQDPGK 125
>gi|161016767 mucin 21 [Homo sapiens]
Length = 566
Score = 39.3 bits (90), Expect = 0.037
Identities = 27/116 (23%), Positives = 45/116 (38%), Gaps = 5/116 (4%)
Query: 1100 ERAAVSENDSDELLIDLERPQSNSSAVTGTSGSIMENGV-----SSSSTADKSQKQSLTP 1154
E + VS S + S +S T + NG S SST +
Sbjct: 184 ESSTVSSRASTATNSESSTTSSGASTATNSESRTTSNGAGTATNSESSTTSSGASTATNS 243
Query: 1155 SFQSPATSLGLDEGVSASSAGAGAGETLKQECDSLGPQMASSTTSKPSSSSSGPRT 1210
+P++ G +S+ +GAG E ++ +++ T S+ S+ SSG T
Sbjct: 244 ESSTPSSGAGTATNSESSTTSSGAGTATNSESSTVSSGISTVTNSESSTPSSGANT 299
Score = 39.3 bits (90), Expect = 0.037
Identities = 30/128 (23%), Positives = 56/128 (43%), Gaps = 3/128 (2%)
Query: 1121 SNSSAVTGTSGSIMENGVSSSSTADKSQKQSLTPSFQSPATSLGLDEGVSASSAGAGAGE 1180
S SS + + + +G S++S+ + S + + S A++ E + SS GA
Sbjct: 348 SESSTTSSGASTATNSGSSTTSSGTSTATNSESSTVSSGASTATTSESSTTSS---GAST 404
Query: 1181 TLKQECDSLGPQMASSTTSKPSSSSSGPRTLPWPGQPIRGCRGPQAALPPVVILSKAAYS 1240
E ++ +++T S+ S++SSG T G + AAL + S +A +
Sbjct: 405 ATNSESSTVSSGASTATNSESSTTSSGANTATNSGSSVTSAGSGTAALTGMHTTSHSAST 464
Query: 1241 LLGSQKSG 1248
+ K G
Sbjct: 465 AVSEAKPG 472
Score = 38.5 bits (88), Expect = 0.064
Identities = 28/111 (25%), Positives = 50/111 (45%), Gaps = 10/111 (9%)
Query: 1100 ERAAVSENDSDELLIDLERPQSNSSAVTGTSGSIMENGVSSSSTADKSQKQSLTPSFQSP 1159
E + S S + P S +S T + S +G S+++ +D S T S S
Sbjct: 109 ESSTTSSGASTATNSESSTPSSGASTATNSDSSTTSSGASTATNSDSST----TSSEAST 164
Query: 1160 ATSLGLDEGVSASSAGAGAGETLKQECDSLGPQMASSTTSKPSSSSSGPRT 1210
AT+ +S+ +GA E ++ + +++T S+ S++SSG T
Sbjct: 165 ATNS------ESSTTSSGASTATNSESSTVSSRASTATNSESSTTSSGAST 209
Score = 35.8 bits (81), Expect = 0.41
Identities = 25/101 (24%), Positives = 44/101 (43%), Gaps = 5/101 (4%)
Query: 1115 DLERPQSNSSAVTGTSGSIMENGVSSSSTADKS---QKQSLTPSFQSPATSLGLDEGVSA 1171
D S +S T + S +G S+++ ++ S + S + +S TS G ++
Sbjct: 154 DSSTTSSEASTATNSESSTTSSGASTATNSESSTVSSRASTATNSESSTTSSGASTATNS 213
Query: 1172 SS--AGAGAGETLKQECDSLGPQMASSTTSKPSSSSSGPRT 1210
S GAG E + +++T S+ S+ SSG T
Sbjct: 214 ESRTTSNGAGTATNSESSTTSSGASTATNSESSTPSSGAGT 254
Score = 35.8 bits (81), Expect = 0.41
Identities = 25/90 (27%), Positives = 41/90 (45%), Gaps = 2/90 (2%)
Query: 1121 SNSSAVTGTSGSIMENGVSSSSTADKSQKQSLTPSFQSPATSLGLDEGVSASSAGAGAGE 1180
++ S+ T + S N SS++++ S + S S S + G S +S+G
Sbjct: 317 NSDSSTTSSGASTATNSESSTTSSGASTATNSESSTTSSGASTATNSGSSTTSSGTSTAT 376
Query: 1181 TLKQECDSLGPQMASSTTSKPSSSSSGPRT 1210
+ S G A TTS+ S++SSG T
Sbjct: 377 NSESSTVSSGASTA--TTSESSTTSSGAST 404
Score = 34.7 bits (78), Expect = 0.92
Identities = 33/152 (21%), Positives = 64/152 (42%), Gaps = 6/152 (3%)
Query: 1121 SNSSAVTGTSGSIMENGVSSSSTADKSQKQS---LTPSFQSPATSLGLDEGVSASSA--G 1175
S + T + S + +G+S+ + ++ S S + +S TS G + ++ S+
Sbjct: 265 SGAGTATNSESSTVSSGISTVTNSESSTPSSGANTATNSESSTTSSGANTATNSDSSTTS 324
Query: 1176 AGAGETLKQECDSLGPQMASSTTSKPSSSSSGPRTLPWPGQPIRGCRGPQAALPPVVILS 1235
+GA E + +++T S+ S++SSG T G A +S
Sbjct: 325 SGASTATNSESSTTSSGASTATNSESSTTSSGASTATNSGSSTTSSGTSTATNSESSTVS 384
Query: 1236 KAAYSLLGSQKSGKLPSSSSLLPHADVAWVSS 1267
A S + +S S +S +++ + VSS
Sbjct: 385 SGA-STATTSESSTTSSGASTATNSESSTVSS 415
Score = 34.7 bits (78), Expect = 0.92
Identities = 28/106 (26%), Positives = 44/106 (41%), Gaps = 2/106 (1%)
Query: 1105 SENDSDELLIDLERPQSNSSAVTGTSGSIMENGVSSSSTADKSQKQSLTPSFQSPATSLG 1164
+ +DS ++ S+ T + S N SS++++ S + S S TS
Sbjct: 316 TNSDSSTTSSGASTATNSESSTTSSGASTATNSESSTTSSGASTATNSGSSTTSSGTSTA 375
Query: 1165 LDEGVSASSAGAGAGETLKQECDSLGPQMASSTTSKPSSSSSGPRT 1210
+ S S+GA T + S G A T S+ S+ SSG T
Sbjct: 376 TNSESSTVSSGASTATTSESSTTSSGASTA--TNSESSTVSSGAST 419
Score = 32.7 bits (73), Expect = 3.5
Identities = 23/91 (25%), Positives = 41/91 (45%), Gaps = 3/91 (3%)
Query: 1121 SNSSAVTGTSG-SIMENGVSSSSTADKSQKQSLTPSFQSPATSLGLDEGVSASSAGAGAG 1179
+NS T +SG SI N S SST + +P++ +S+ +GA
Sbjct: 91 TNSEFSTVSSGISIATN--SESSTTSSGASTATNSESSTPSSGASTATNSDSSTTSSGAS 148
Query: 1180 ETLKQECDSLGPQMASSTTSKPSSSSSGPRT 1210
+ + + +++T S+ S++SSG T
Sbjct: 149 TATNSDSSTTSSEASTATNSESSTTSSGAST 179
Score = 32.7 bits (73), Expect = 3.5
Identities = 23/96 (23%), Positives = 43/96 (44%), Gaps = 5/96 (5%)
Query: 1121 SNSSAVTGTSGSIMENGVSSSSTADK---SQKQSLTPSFQSPATSLGLDEGVSASSA--G 1175
S +S T + S +G S+++ ++ S + +S TS G ++ S+
Sbjct: 190 SRASTATNSESSTTSSGASTATNSESRTTSNGAGTATNSESSTTSSGASTATNSESSTPS 249
Query: 1176 AGAGETLKQECDSLGPQMASSTTSKPSSSSSGPRTL 1211
+GAG E + ++T S+ S+ SSG T+
Sbjct: 250 SGAGTATNSESSTTSSGAGTATNSESSTVSSGISTV 285
Score = 32.0 bits (71), Expect = 6.0
Identities = 21/88 (23%), Positives = 42/88 (47%), Gaps = 7/88 (7%)
Query: 243 SSASCHSIKPSSSVSSTVTPENGTTNGYKSGFTQTD-------AANGNSSHGGKGSASSS 295
++ + S PSS S+ ++ TT+ S T +D A+ +S S+ +S
Sbjct: 119 TATNSESSTPSSGASTATNSDSSTTSSGASTATNSDSSTTSSEASTATNSESSTTSSGAS 178
Query: 296 TPAHTGNYSLSPRPSYASGDQATMFISG 323
T ++ + ++S R S A+ +++ SG
Sbjct: 179 TATNSESSTVSSRASTATNSESSTTSSG 206
Score = 32.0 bits (71), Expect = 6.0
Identities = 24/104 (23%), Positives = 43/104 (41%)
Query: 243 SSASCHSIKPSSSVSSTVTPENGTTNGYKSGFTQTDAANGNSSHGGKGSASSSTPAHTGN 302
++ + S SS S+ T E+ TT+ S T ++++ +S ++ SST + N
Sbjct: 374 TATNSESSTVSSGASTATTSESSTTSSGASTATNSESSTVSSGASTATNSESSTTSSGAN 433
Query: 303 YSLSPRPSYASGDQATMFISGPPKKRHRGWYPGSPLPQPGLVVP 346
+ + S S T ++G H S G +VP
Sbjct: 434 TATNSGSSVTSAGSGTAALTGMHTTSHSASTAVSEAKPGGSLVP 477
>gi|169166609 PREDICTED: similar to ribonucleic acid binding protein
S1 isoform 6 [Homo sapiens]
Length = 305
Score = 38.5 bits (88), Expect = 0.064
Identities = 30/101 (29%), Positives = 46/101 (45%), Gaps = 4/101 (3%)
Query: 241 RQSSASCHSIKPSSSVSSTVTPENGTTNGYKSGFTQTDAANGNSSHGGKGSASSSTPAHT 300
++ SAS S S SST + + T+ G SG + + A SS G S S S+ + +
Sbjct: 64 KRRSASSGSSSTRSRSSSTSSSGSSTSTGSSSGSSSSSA----SSRSGSSSTSRSSSSSS 119
Query: 301 GNYSLSPRPSYASGDQATMFISGPPKKRHRGWYPGSPLPQP 341
+ S SP + + S PPK+ + SP P+P
Sbjct: 120 SSGSPSPSRRRHDNRRRSRSKSKPPKRDEKERKRRSPSPKP 160
Score = 32.0 bits (71), Expect = 6.0
Identities = 23/68 (33%), Positives = 35/68 (51%), Gaps = 15/68 (22%)
Query: 1139 SSSSTADKSQKQSLTPSFQSPATSLGLDEGVSASSAGAGAGETLKQECDSLGPQMASSTT 1198
S+SS + ++ +S + S +TS G G S+SSA + +G SS+T
Sbjct: 67 SASSGSSSTRSRSSSTSSSGSSTSTGSSSGSSSSSASSRSG---------------SSST 111
Query: 1199 SKPSSSSS 1206
S+ SSSSS
Sbjct: 112 SRSSSSSS 119
>gi|113415994 PREDICTED: similar to ribonucleic acid binding protein
S1 isoform 2 [Homo sapiens]
Length = 305
Score = 38.5 bits (88), Expect = 0.064
Identities = 30/101 (29%), Positives = 46/101 (45%), Gaps = 4/101 (3%)
Query: 241 RQSSASCHSIKPSSSVSSTVTPENGTTNGYKSGFTQTDAANGNSSHGGKGSASSSTPAHT 300
++ SAS S S SST + + T+ G SG + + A SS G S S S+ + +
Sbjct: 64 KRRSASSGSSSTRSRSSSTSSSGSSTSTGSSSGSSSSSA----SSRSGSSSTSRSSSSSS 119
Query: 301 GNYSLSPRPSYASGDQATMFISGPPKKRHRGWYPGSPLPQP 341
+ S SP + + S PPK+ + SP P+P
Sbjct: 120 SSGSPSPSRRRHDNRRRSRSKSKPPKRDEKERKRRSPSPKP 160
Score = 32.0 bits (71), Expect = 6.0
Identities = 23/68 (33%), Positives = 35/68 (51%), Gaps = 15/68 (22%)
Query: 1139 SSSSTADKSQKQSLTPSFQSPATSLGLDEGVSASSAGAGAGETLKQECDSLGPQMASSTT 1198
S+SS + ++ +S + S +TS G G S+SSA + +G SS+T
Sbjct: 67 SASSGSSSTRSRSSSTSSSGSSTSTGSSSGSSSSSASSRSG---------------SSST 111
Query: 1199 SKPSSSSS 1206
S+ SSSSS
Sbjct: 112 SRSSSSSS 119
>gi|113415504 PREDICTED: similar to ribonucleic acid binding protein
S1 [Homo sapiens]
Length = 305
Score = 38.5 bits (88), Expect = 0.064
Identities = 30/101 (29%), Positives = 46/101 (45%), Gaps = 4/101 (3%)
Query: 241 RQSSASCHSIKPSSSVSSTVTPENGTTNGYKSGFTQTDAANGNSSHGGKGSASSSTPAHT 300
++ SAS S S SST + + T+ G SG + + A SS G S S S+ + +
Sbjct: 64 KRHSASSGSSSTRSRSSSTSSSGSSTSTGSSSGSSSSSA----SSRSGSSSTSRSSSSSS 119
Query: 301 GNYSLSPRPSYASGDQATMFISGPPKKRHRGWYPGSPLPQP 341
+ S SP + + S PPK+ + SP P+P
Sbjct: 120 SSGSPSPSRRRHDNRRRSRSKSKPPKRDEKERKRRSPSPKP 160
Score = 31.6 bits (70), Expect = 7.8
Identities = 29/103 (28%), Positives = 46/103 (44%), Gaps = 15/103 (14%)
Query: 1105 SENDSDELLIDLERPQSNSSAVTGTSGSIMENGVSSSSTADKSQKQSLTPSFQSPATSLG 1164
S+ S + D + +S G + + SS S++ +S+ S + S S TS G
Sbjct: 35 SDEKSKDRSKDKGATKESSEKDRGRDKTRKRHSASSGSSSTRSRSSSTSSSGSS--TSTG 92
Query: 1165 LDEGVSASSAGAGAGETLKQECDSLGPQMASSTTSKPSSSSSG 1207
G S+SSA + +G + S++ S SSSSSG
Sbjct: 93 SSSGSSSSSASSRSGSS-------------STSRSSSSSSSSG 122
>gi|169166499 PREDICTED: similar to ribonucleic acid binding protein
S1 [Homo sapiens]
Length = 305
Score = 38.5 bits (88), Expect = 0.064
Identities = 30/101 (29%), Positives = 46/101 (45%), Gaps = 4/101 (3%)
Query: 241 RQSSASCHSIKPSSSVSSTVTPENGTTNGYKSGFTQTDAANGNSSHGGKGSASSSTPAHT 300
++ SAS S S SST + + T+ G SG + + A SS G S S S+ + +
Sbjct: 64 KRHSASSGSSSTRSRSSSTSSSGSSTSTGSSSGSSSSSA----SSRSGSSSTSRSSSSSS 119
Query: 301 GNYSLSPRPSYASGDQATMFISGPPKKRHRGWYPGSPLPQP 341
+ S SP + + S PPK+ + SP P+P
Sbjct: 120 SSGSPSPSRRRHDNRRRSRSKSKPPKRDEKERKRRSPSPKP 160
Score = 31.6 bits (70), Expect = 7.8
Identities = 29/103 (28%), Positives = 46/103 (44%), Gaps = 15/103 (14%)
Query: 1105 SENDSDELLIDLERPQSNSSAVTGTSGSIMENGVSSSSTADKSQKQSLTPSFQSPATSLG 1164
S+ S + D + +S G + + SS S++ +S+ S + S S TS G
Sbjct: 35 SDEKSKDRSKDKGATKESSEKDRGRDKTRKRHSASSGSSSTRSRSSSTSSSGSS--TSTG 92
Query: 1165 LDEGVSASSAGAGAGETLKQECDSLGPQMASSTTSKPSSSSSG 1207
G S+SSA + +G + S++ S SSSSSG
Sbjct: 93 SSSGSSSSSASSRSGSS-------------STSRSSSSSSSSG 122
>gi|113415498 PREDICTED: similar to ribonucleic acid binding protein
S1 [Homo sapiens]
Length = 305
Score = 38.5 bits (88), Expect = 0.064
Identities = 30/101 (29%), Positives = 46/101 (45%), Gaps = 4/101 (3%)
Query: 241 RQSSASCHSIKPSSSVSSTVTPENGTTNGYKSGFTQTDAANGNSSHGGKGSASSSTPAHT 300
++ SAS S S SST + + T+ G SG + + A SS G S S S+ + +
Sbjct: 64 KRHSASSGSSSTRSRSSSTSSSGSSTSTGSSSGSSSSSA----SSRSGSSSTSRSSSSSS 119
Query: 301 GNYSLSPRPSYASGDQATMFISGPPKKRHRGWYPGSPLPQP 341
+ S SP + + S PPK+ + SP P+P
Sbjct: 120 SSGSPSPSRRRHDNRRRSRSKSKPPKRDEKERKRRSPSPKP 160
Score = 31.6 bits (70), Expect = 7.8
Identities = 29/103 (28%), Positives = 46/103 (44%), Gaps = 15/103 (14%)
Query: 1105 SENDSDELLIDLERPQSNSSAVTGTSGSIMENGVSSSSTADKSQKQSLTPSFQSPATSLG 1164
S+ S + D + +S G + + SS S++ +S+ S + S S TS G
Sbjct: 35 SDEKSKDRSKDKGATKESSEKDRGRDKTRKRHSASSGSSSTRSRSSSTSSSGSS--TSTG 92
Query: 1165 LDEGVSASSAGAGAGETLKQECDSLGPQMASSTTSKPSSSSSG 1207
G S+SSA + +G + S++ S SSSSSG
Sbjct: 93 SSSGSSSSSASSRSGSS-------------STSRSSSSSSSSG 122
>gi|88973230 PREDICTED: similar to ribonucleic acid binding protein
S1 isoform 3 [Homo sapiens]
Length = 305
Score = 38.5 bits (88), Expect = 0.064
Identities = 30/101 (29%), Positives = 46/101 (45%), Gaps = 4/101 (3%)
Query: 241 RQSSASCHSIKPSSSVSSTVTPENGTTNGYKSGFTQTDAANGNSSHGGKGSASSSTPAHT 300
++ SAS S S SST + + T+ G SG + + A SS G S S S+ + +
Sbjct: 64 KRHSASSGSSSTRSRSSSTSSSGSSTSTGSSSGSSSSSA----SSRSGSSSTSRSSSSSS 119
Query: 301 GNYSLSPRPSYASGDQATMFISGPPKKRHRGWYPGSPLPQP 341
+ S SP + + S PPK+ + SP P+P
Sbjct: 120 SSGSPSPSRRRHDNRRRSRSKSKPPKRDEKERKRRSPSPKP 160
Score = 31.6 bits (70), Expect = 7.8
Identities = 29/103 (28%), Positives = 46/103 (44%), Gaps = 15/103 (14%)
Query: 1105 SENDSDELLIDLERPQSNSSAVTGTSGSIMENGVSSSSTADKSQKQSLTPSFQSPATSLG 1164
S+ S + D + +S G + + SS S++ +S+ S + S S TS G
Sbjct: 35 SDEKSKDRSKDKGATKESSEKDRGRDKTRKRHSASSGSSSTRSRSSSTSSSGSS--TSTG 92
Query: 1165 LDEGVSASSAGAGAGETLKQECDSLGPQMASSTTSKPSSSSSG 1207
G S+SSA + +G + S++ S SSSSSG
Sbjct: 93 SSSGSSSSSASSRSGSS-------------STSRSSSSSSSSG 122
>gi|6857826 RNA-binding protein S1, serine-rich domain [Homo
sapiens]
Length = 305
Score = 38.5 bits (88), Expect = 0.064
Identities = 30/101 (29%), Positives = 46/101 (45%), Gaps = 4/101 (3%)
Query: 241 RQSSASCHSIKPSSSVSSTVTPENGTTNGYKSGFTQTDAANGNSSHGGKGSASSSTPAHT 300
++ SAS S S SST + + T+ G SG + + A SS G S S S+ + +
Sbjct: 64 KRRSASSGSSSTRSRSSSTSSSGSSTSTGSSSGSSSSSA----SSRSGSSSTSRSSSSSS 119
Query: 301 GNYSLSPRPSYASGDQATMFISGPPKKRHRGWYPGSPLPQP 341
+ S SP + + S PPK+ + SP P+P
Sbjct: 120 SSGSPSPSRRRHDNRRRSRSKSKPPKRDEKERKRRSPSPKP 160
Score = 32.0 bits (71), Expect = 6.0
Identities = 23/68 (33%), Positives = 35/68 (51%), Gaps = 15/68 (22%)
Query: 1139 SSSSTADKSQKQSLTPSFQSPATSLGLDEGVSASSAGAGAGETLKQECDSLGPQMASSTT 1198
S+SS + ++ +S + S +TS G G S+SSA + +G SS+T
Sbjct: 67 SASSGSSSTRSRSSSTSSSGSSTSTGSSSGSSSSSASSRSG---------------SSST 111
Query: 1199 SKPSSSSS 1206
S+ SSSSS
Sbjct: 112 SRSSSSSS 119
>gi|18379334 RNA-binding protein S1, serine-rich domain [Homo
sapiens]
Length = 305
Score = 38.5 bits (88), Expect = 0.064
Identities = 30/101 (29%), Positives = 46/101 (45%), Gaps = 4/101 (3%)
Query: 241 RQSSASCHSIKPSSSVSSTVTPENGTTNGYKSGFTQTDAANGNSSHGGKGSASSSTPAHT 300
++ SAS S S SST + + T+ G SG + + A SS G S S S+ + +
Sbjct: 64 KRRSASSGSSSTRSRSSSTSSSGSSTSTGSSSGSSSSSA----SSRSGSSSTSRSSSSSS 119
Query: 301 GNYSLSPRPSYASGDQATMFISGPPKKRHRGWYPGSPLPQP 341
+ S SP + + S PPK+ + SP P+P
Sbjct: 120 SSGSPSPSRRRHDNRRRSRSKSKPPKRDEKERKRRSPSPKP 160
Score = 32.0 bits (71), Expect = 6.0
Identities = 23/68 (33%), Positives = 35/68 (51%), Gaps = 15/68 (22%)
Query: 1139 SSSSTADKSQKQSLTPSFQSPATSLGLDEGVSASSAGAGAGETLKQECDSLGPQMASSTT 1198
S+SS + ++ +S + S +TS G G S+SSA + +G SS+T
Sbjct: 67 SASSGSSSTRSRSSSTSSSGSSTSTGSSSGSSSSSASSRSG---------------SSST 111
Query: 1199 SKPSSSSS 1206
S+ SSSSS
Sbjct: 112 SRSSSSSS 119
>gi|18450371 protein tyrosine phosphatase, receptor type, A isoform 2
precursor [Homo sapiens]
Length = 793
Score = 37.7 bits (86), Expect = 0.11
Identities = 30/120 (25%), Positives = 55/120 (45%), Gaps = 6/120 (5%)
Query: 1127 TGTSGSIMENGVSSSSTADKSQKQSLTPSFQSPATSLGLDEGVSASSAGAGAGETLKQEC 1186
+ T+ + E +S+ T+ + S+ P+F SP +LG + +S+ + G T
Sbjct: 37 SSTAEPVKEEAKTSNPTSSLTSL-SVAPTF-SPNITLGPTYLTTVNSSDSDNGTTRTAST 94
Query: 1187 DSLGPQMASSTTSKPSSSSSGPRTLPWPGQPIRGCRGPQAALP----PVVILSKAAYSLL 1242
+S+G ++ + T P + + RT PW G P+ P P++ + A SLL
Sbjct: 95 NSIGITISPNGTWLPDNQFTDARTEPWEGNSSTAATTPETFPPSDETPIIAVMVALSSLL 154
>gi|18450369 protein tyrosine phosphatase, receptor type, A isoform 2
precursor [Homo sapiens]
Length = 793
Score = 37.7 bits (86), Expect = 0.11
Identities = 30/120 (25%), Positives = 55/120 (45%), Gaps = 6/120 (5%)
Query: 1127 TGTSGSIMENGVSSSSTADKSQKQSLTPSFQSPATSLGLDEGVSASSAGAGAGETLKQEC 1186
+ T+ + E +S+ T+ + S+ P+F SP +LG + +S+ + G T
Sbjct: 37 SSTAEPVKEEAKTSNPTSSLTSL-SVAPTF-SPNITLGPTYLTTVNSSDSDNGTTRTAST 94
Query: 1187 DSLGPQMASSTTSKPSSSSSGPRTLPWPGQPIRGCRGPQAALP----PVVILSKAAYSLL 1242
+S+G ++ + T P + + RT PW G P+ P P++ + A SLL
Sbjct: 95 NSIGITISPNGTWLPDNQFTDARTEPWEGNSSTAATTPETFPPSDETPIIAVMVALSSLL 154
>gi|62988361 absent in melanoma 1 [Homo sapiens]
Length = 1723
Score = 37.7 bits (86), Expect = 0.11
Identities = 48/180 (26%), Positives = 71/180 (39%), Gaps = 29/180 (16%)
Query: 1095 SGKEQERAAVSENDSDELLIDLERPQSNSSAVTGTSGSIMENGVSSSSTADKSQKQSLTP 1154
SG+ R S+ +D D E P+S + + N S +++A+K K
Sbjct: 6 SGRRSGRRRGSQKSTDSPGADAELPESAARDDAVFDDEVAPNAASDNASAEKKVK----- 60
Query: 1155 SFQSPATSLGLDEGVSA-----SSAGAGAGETLKQECD-SLGPQMASSTTSKPSSSSSGP 1208
SP + LD GV++ S G L+ E D S P ASS T + S +
Sbjct: 61 ---SPRAA--LDGGVASAASPESKPSPGTKGQLRGESDRSKQPPPASSPTKRKGRSRALE 115
Query: 1209 RTLPWPGQPIRGCRGPQAALPPVVI-----LSKAAYSLLGSQKSGKLP-----SSSSLLP 1258
P P G R P PP + ++K + G + + +P SSSLLP
Sbjct: 116 AV---PAPPASGPRAPAKESPPKRVPDPSPVTKGTAAESGEEAARAIPRELPVKSSSLLP 172
>gi|31881687 replication factor C 4 [Homo sapiens]
Length = 363
Score = 37.4 bits (85), Expect = 0.14
Identities = 43/165 (26%), Positives = 67/165 (40%), Gaps = 40/165 (24%)
Query: 1262 VAWVSSLRPLLNKDMSSEEQSLYYRQWTLARQHHADYSNQLDPASGTRNFHPRRLLLTGP 1321
V WV RP +++ +E+ + + +L AD N LL GP
Sbjct: 38 VPWVEKYRPKCVDEVAFQEEVVAVLKKSL---EGADLPN---------------LLFYGP 79
Query: 1322 PQVGKTGSYLQFLRILF---RMLIRLLEVDVYDEEEINTDHNESSEVSQ-------SEGE 1371
P GKT + L R LF +R+LE++ DE I + +Q S+G+
Sbjct: 80 PGTGKTSTILAAARELFGPELFRLRVLELNASDERGIQVVREKVKNFAQLTVSGSRSDGK 139
Query: 1372 PWPDIESFSKMPFDVSVHDPKYSLMSLVYTEKLAGVKQEVIKESK 1416
P P PF + + D S+ S A +++ + KESK
Sbjct: 140 PCP--------PFKIVILDEADSMTSAAQ----AALRRTMEKESK 172
>gi|4506491 replication factor C 4 [Homo sapiens]
Length = 363
Score = 37.4 bits (85), Expect = 0.14
Identities = 43/165 (26%), Positives = 67/165 (40%), Gaps = 40/165 (24%)
Query: 1262 VAWVSSLRPLLNKDMSSEEQSLYYRQWTLARQHHADYSNQLDPASGTRNFHPRRLLLTGP 1321
V WV RP +++ +E+ + + +L AD N LL GP
Sbjct: 38 VPWVEKYRPKCVDEVAFQEEVVAVLKKSL---EGADLPN---------------LLFYGP 79
Query: 1322 PQVGKTGSYLQFLRILF---RMLIRLLEVDVYDEEEINTDHNESSEVSQ-------SEGE 1371
P GKT + L R LF +R+LE++ DE I + +Q S+G+
Sbjct: 80 PGTGKTSTILAAARELFGPELFRLRVLELNASDERGIQVVREKVKNFAQLTVSGSRSDGK 139
Query: 1372 PWPDIESFSKMPFDVSVHDPKYSLMSLVYTEKLAGVKQEVIKESK 1416
P P PF + + D S+ S A +++ + KESK
Sbjct: 140 PCP--------PFKIVILDEADSMTSAAQ----AALRRTMEKESK 172
>gi|110431348 deleted in colorectal carcinoma [Homo sapiens]
Length = 1447
Score = 37.0 bits (84), Expect = 0.19
Identities = 40/153 (26%), Positives = 64/153 (41%), Gaps = 18/153 (11%)
Query: 1111 ELLIDLERPQSNSSAVTGTSGSIMEN----GVSSSSTADKSQKQ-SLTPSFQSPATSLGL 1165
+L+I ++ +N + V+ +E+ G+ S T Q +L P P +L +
Sbjct: 1233 KLMIPMDAQSNNPAVVSAIPVPTLESAQYPGILPSPTCGYPHPQFTLRPV---PFPTLSV 1289
Query: 1166 DEGVSASSAGAGAGETLKQECDSLGPQMASSTTSKPSSSSSGP-RTLPW----PGQPIRG 1220
D G GAG +++ + + P M + + SSS P RT+P P P+R
Sbjct: 1290 DRGF-----GAGRSQSVSEGPTTQQPPMLPPSQPEHSSSEEAPSRTIPTACVRPTHPLRS 1344
Query: 1221 CRGPQAALPPVVILSKAAYSLLGSQKSGKLPSS 1253
P P I K Y+ L SQ LP +
Sbjct: 1345 FANPLLPPPMSAIEPKVPYTPLLSQPGPTLPKT 1377
>gi|158187521 A-kinase anchor protein 5 [Homo sapiens]
Length = 427
Score = 36.2 bits (82), Expect = 0.32
Identities = 42/178 (23%), Positives = 69/178 (38%), Gaps = 17/178 (9%)
Query: 1086 RGPTVALDLSGKEQERAAVSENDSDELLIDLERPQSNSSAVTGTSGSIMENGVS---SSS 1142
RGP + E ++ + E+L + N A S + G+S
Sbjct: 134 RGPKRSNHSKIIEDSDCSIKVQEEAEILDIQTQTPLNDQATKAKSTQDLSEGISRKDGDE 193
Query: 1143 TADKSQKQSLTPSFQSPATSLGLDEGVSASSAGA---GAGETLKQECDSLGPQMASSTTS 1199
+ + S T + + LGLD G SA G ET+K++ D + PQ AS +
Sbjct: 194 VCESNVSNSTTSGEKVISVELGLDNGHSAIQTGTLILEEIETIKEKQD-VQPQQASPLET 252
Query: 1200 KPSSSSSGPRTLPWPGQPIRGCRGPQAALPPVVILSKAAYSLLGSQKSGKLPSSSSLL 1257
+ QP+ P A+P I+ +A+ S L S +GK S+ ++
Sbjct: 253 SETDHQ----------QPVLSDVPPLPAIPDQQIVEEASNSTLESAPNGKDYESTEIV 300
>gi|92859678 small nuclear RNA activating complex, polypeptide 4,
190kDa [Homo sapiens]
Length = 1469
Score = 36.2 bits (82), Expect = 0.32
Identities = 36/128 (28%), Positives = 54/128 (42%), Gaps = 10/128 (7%)
Query: 1121 SNSSAVTGTSGSIMENGVSSSSTADKSQKQS-------LTPSFQSPATSLGLDEGVSASS 1173
S+S + +G+SG + SSS + Q Q+ L+P + P L + S S
Sbjct: 522 SSSGSSSGSSGGSSSSSSSSSEEDEPEQAQAGEGDRALLSPQYMVPDMDLWVPARQSTSQ 581
Query: 1174 A-GAGAGETLKQECDSLGPQMASSTTSKPSSSSSGPRTLPWPGQPIRGCRGPQAALPPVV 1232
GAG L SL P SS + S +S T PG+ + P A PV
Sbjct: 582 PWRGGAGAWLGGPAASLSPPKGSSASQGGSKEAS--TTAAAPGEETSPVQVPARAHGPVP 639
Query: 1233 ILSKAAYS 1240
++A++S
Sbjct: 640 RSAQASHS 647
>gi|112382226 atrophin-1 like protein isoform b [Homo sapiens]
Length = 1012
Score = 35.8 bits (81), Expect = 0.41
Identities = 51/198 (25%), Positives = 81/198 (40%), Gaps = 30/198 (15%)
Query: 1081 SKEVIRGPTVALDLSGKEQERAAVSENDSDELLI------DLERPQSNSSAVTGTSGSIM 1134
+K+V + L + +++E+ A ++D ++ RP S S +S S
Sbjct: 79 AKKVKEEASSPLKSNKRQREKVASDTEEADRTSSKKTKTQEISRPNSPSEGEGESSDSRS 138
Query: 1135 ENGVSSSSTADKSQ-KQSLTPSFQSPATSLGLDEGVSASSAGAGAGETLKQECDSLGPQM 1193
N SS D Q +S +PS SP + E S SSA + L+ + +L Q
Sbjct: 139 VNDEGSSDPKDIDQDNRSTSPSIPSPQDN----ESDSDSSAQQ---QMLQAQPPAL--QA 189
Query: 1194 ASSTTSKPSSSSSGPRTLPWPGQPIRGCRGPQA-ALPPVVILSKAAYSLLGSQKSGKLPS 1252
+ T PSS+ G LP PG P A A+PP S SQ + +
Sbjct: 190 PTGVTPAPSSAPPGTPQLPTPGPT------PSATAVPP-------QGSPTASQAPNQPQA 236
Query: 1253 SSSLLPHADVAWVSSLRP 1270
++ +PH + +L P
Sbjct: 237 PTAPVPHTHIQQAPALHP 254
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.317 0.133 0.392
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 75,184,468
Number of Sequences: 37866
Number of extensions: 3689677
Number of successful extensions: 15138
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 28
Number of HSP's successfully gapped in prelim test: 153
Number of HSP's that attempted gapping in prelim test: 14207
Number of HSP's gapped (non-prelim): 1010
length of query: 1923
length of database: 18,247,518
effective HSP length: 117
effective length of query: 1806
effective length of database: 13,817,196
effective search space: 24953855976
effective search space used: 24953855976
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 70 (31.6 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.