Guide to the Human Genome
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Search of human proteins with 217035105

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|217035105 DnaJ (Hsp40) homolog, subfamily C, member 11 [Homo
sapiens]
         (559 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|217035105 DnaJ (Hsp40) homolog, subfamily C, member 11 [Homo ...  1105   0.0  
gi|47777312 DnaJ (Hsp40) homolog, subfamily B, member 3 [Homo sa...    86   7e-17
gi|17388799 DnaJ (Hsp40) homolog, subfamily B, member 6 isoform ...    85   2e-16
gi|4885495 DnaJ (Hsp40) homolog, subfamily B, member 6 isoform b...    85   2e-16
gi|5453690 DnaJ (Hsp40) homolog, subfamily B, member 1 [Homo sap...    78   2e-14
gi|6631085 DnaJ (Hsp40) homolog, subfamily B, member 4 [Homo sap...    77   3e-14
gi|201862587 DnaJ (Hsp40) homolog, subfamily B, member 5 isoform...    77   3e-14
gi|201862518 DnaJ (Hsp40) homolog, subfamily B, member 5 isoform...    77   3e-14
gi|56549115 DnaJ (Hsp40) homolog, subfamily B, member 5 isoform ...    77   3e-14
gi|21553335 DnaJ (Hsp40) homolog, subfamily B, member 7 [Homo sa...    75   1e-13
gi|88501736 DnaJ (Hsp40) homolog, subfamily B, member 2 isoform ...    75   2e-13
gi|27151736 DnaJ (Hsp40) homolog, subfamily B, member 2 isoform ...    75   2e-13
gi|194328760 DnaJ (Hsp40) homolog, subfamily A, member 4 isoform...    73   6e-13
gi|194328758 DnaJ (Hsp40) homolog, subfamily A, member 4 isoform...    73   6e-13
gi|23503241 DnaJ homolog, subfamily B, member 8 [Homo sapiens]         72   2e-12
gi|39204547 testis spermatogenesis apoptosis-related protein 6 [...    70   5e-12
gi|68077168 DnaJ homology subfamily A member 5 isoform 1 [Homo s...    70   5e-12
gi|68077166 DnaJ homology subfamily A member 5 isoform 2 [Homo s...    70   5e-12
gi|205360840 DnaJ (Hsp40) homolog, subfamily A, member 3 isoform...    68   3e-11
gi|205360838 DnaJ (Hsp40) homolog, subfamily A, member 3 isoform...    68   3e-11
gi|7706495 DnaJ (Hsp40) homolog, subfamily B, member 11 precurso...    65   1e-10
gi|194306642 DnaJ (Hsp40) homolog, subfamily B, member 12 [Homo ...    65   2e-10
gi|194306640 DnaJ (Hsp40) homolog, subfamily B, member 12 [Homo ...    65   2e-10
gi|4504511 DnaJ (Hsp40) homolog, subfamily A, member 1 [Homo sap...    64   3e-10
gi|24308127 DnaJ (Hsp40) homolog, subfamily C, member 10 [Homo s...    64   4e-10
gi|56687498 DnaJ (Hsp40) homolog, subfamily C, member 16 [Homo s...    64   5e-10
gi|221219056 DnaJ (Hsp40) homolog, subfamily C, member 7 isoform...    63   6e-10
gi|221219053 DnaJ (Hsp40) homolog, subfamily C, member 7 isoform...    63   6e-10
gi|5453980 DnaJ (Hsp40) homolog, subfamily C, member 3 [Homo sap...    63   8e-10
gi|9558755 DnaJ (Hsp40) homolog, subfamily B, member 9 [Homo sap...    62   1e-09

>gi|217035105 DnaJ (Hsp40) homolog, subfamily C, member 11 [Homo
           sapiens]
          Length = 559

 Score = 1105 bits (2857), Expect = 0.0
 Identities = 559/559 (100%), Positives = 559/559 (100%)

Query: 1   MATALSEEELDNEDYYSLLNVRREASSEELKAAYRRLCMLYHPDKHRDPELKSQAERLFN 60
           MATALSEEELDNEDYYSLLNVRREASSEELKAAYRRLCMLYHPDKHRDPELKSQAERLFN
Sbjct: 1   MATALSEEELDNEDYYSLLNVRREASSEELKAAYRRLCMLYHPDKHRDPELKSQAERLFN 60

Query: 61  LVHQAYEVLSDPQTRAIYDIYGKRGLEMEGWEVVERRRTPAEIREEFERLQREREERRLQ 120
           LVHQAYEVLSDPQTRAIYDIYGKRGLEMEGWEVVERRRTPAEIREEFERLQREREERRLQ
Sbjct: 61  LVHQAYEVLSDPQTRAIYDIYGKRGLEMEGWEVVERRRTPAEIREEFERLQREREERRLQ 120

Query: 121 QRTNPKGTISVGVDATDLFDRYDEEYEDVSGSSFPQIEINKMHISQSIEAPLTATDTAIL 180
           QRTNPKGTISVGVDATDLFDRYDEEYEDVSGSSFPQIEINKMHISQSIEAPLTATDTAIL
Sbjct: 121 QRTNPKGTISVGVDATDLFDRYDEEYEDVSGSSFPQIEINKMHISQSIEAPLTATDTAIL 180

Query: 181 SGSLSTQNGNGGGSINFALRRVTSAKGWGELEFGAGDLQGPLFGLKLFRNLTPRCFVTTN 240
           SGSLSTQNGNGGGSINFALRRVTSAKGWGELEFGAGDLQGPLFGLKLFRNLTPRCFVTTN
Sbjct: 181 SGSLSTQNGNGGGSINFALRRVTSAKGWGELEFGAGDLQGPLFGLKLFRNLTPRCFVTTN 240

Query: 241 CALQFSSRGIRPGLTTVLARNLDKNTVGYLQWRWGIQSAMNTSIVRDTKTSHFTVALQLG 300
           CALQFSSRGIRPGLTTVLARNLDKNTVGYLQWRWGIQSAMNTSIVRDTKTSHFTVALQLG
Sbjct: 241 CALQFSSRGIRPGLTTVLARNLDKNTVGYLQWRWGIQSAMNTSIVRDTKTSHFTVALQLG 300

Query: 301 IPHSFALISYQHKFQDDDQTRVKGSLKAGFFGTVVEYGAERKISRHSVLGAAVSVGVPQG 360
           IPHSFALISYQHKFQDDDQTRVKGSLKAGFFGTVVEYGAERKISRHSVLGAAVSVGVPQG
Sbjct: 301 IPHSFALISYQHKFQDDDQTRVKGSLKAGFFGTVVEYGAERKISRHSVLGAAVSVGVPQG 360

Query: 361 VSLKVKLNRASQTYFFPIHLTDQLLPSAMFYATVGPLVVYFAMHRLIIKPYLRAQKEKEL 420
           VSLKVKLNRASQTYFFPIHLTDQLLPSAMFYATVGPLVVYFAMHRLIIKPYLRAQKEKEL
Sbjct: 361 VSLKVKLNRASQTYFFPIHLTDQLLPSAMFYATVGPLVVYFAMHRLIIKPYLRAQKEKEL 420

Query: 421 EKQRESAATDVLQKKQEAESAVRLMQESVRRIIEAEESRMGLIIVNAWYGKFVNDKSRKS 480
           EKQRESAATDVLQKKQEAESAVRLMQESVRRIIEAEESRMGLIIVNAWYGKFVNDKSRKS
Sbjct: 421 EKQRESAATDVLQKKQEAESAVRLMQESVRRIIEAEESRMGLIIVNAWYGKFVNDKSRKS 480

Query: 481 EKVKVIDVTVPLQCLVKDSKLILTEASKAGLPGFYDPCVGEEKNLKVLYQFRGVLHQVMV 540
           EKVKVIDVTVPLQCLVKDSKLILTEASKAGLPGFYDPCVGEEKNLKVLYQFRGVLHQVMV
Sbjct: 481 EKVKVIDVTVPLQCLVKDSKLILTEASKAGLPGFYDPCVGEEKNLKVLYQFRGVLHQVMV 540

Query: 541 LDSEALRIPKQSHRIDTDG 559
           LDSEALRIPKQSHRIDTDG
Sbjct: 541 LDSEALRIPKQSHRIDTDG 559


>gi|47777312 DnaJ (Hsp40) homolog, subfamily B, member 3 [Homo
           sapiens]
          Length = 145

 Score = 86.3 bits (212), Expect = 7e-17
 Identities = 49/103 (47%), Positives = 65/103 (63%), Gaps = 11/103 (10%)

Query: 14  DYYSLLNVRREASSEELKAAYRRLCMLYHPDKHRDPELKSQAERLFNLVHQAYEVLSDPQ 73
           DYY +L+V R+ASSE +K AYR+L + +HPDK+  PE K +AER F  V +AYEVLSD +
Sbjct: 3   DYYEVLDVPRQASSEAIKKAYRKLALKWHPDKN--PENKEEAERRFKQVAEAYEVLSDAK 60

Query: 74  TRAIYDIYGKRGLE---------MEGWEVVERRRTPAEIREEF 107
            R IYD YG+ G E          + +E V   R PA++  EF
Sbjct: 61  KRDIYDRYGEAGAEGGCTGGRPFEDPFEYVFSFRDPADVFREF 103


>gi|17388799 DnaJ (Hsp40) homolog, subfamily B, member 6 isoform a
          [Homo sapiens]
          Length = 326

 Score = 84.7 bits (208), Expect = 2e-16
 Identities = 43/77 (55%), Positives = 54/77 (70%), Gaps = 2/77 (2%)

Query: 14 DYYSLLNVRREASSEELKAAYRRLCMLYHPDKHRDPELKSQAERLFNLVHQAYEVLSDPQ 73
          DYY +L V+R AS E++K AYR+L + +HPDK+  PE K +AER F  V +AYEVLSD +
Sbjct: 3  DYYEVLGVQRHASPEDIKKAYRKLALKWHPDKN--PENKEEAERKFKQVAEAYEVLSDAK 60

Query: 74 TRAIYDIYGKRGLEMEG 90
           R IYD YGK GL   G
Sbjct: 61 KRDIYDKYGKEGLNGGG 77


>gi|4885495 DnaJ (Hsp40) homolog, subfamily B, member 6 isoform b
          [Homo sapiens]
          Length = 241

 Score = 84.7 bits (208), Expect = 2e-16
 Identities = 43/77 (55%), Positives = 54/77 (70%), Gaps = 2/77 (2%)

Query: 14 DYYSLLNVRREASSEELKAAYRRLCMLYHPDKHRDPELKSQAERLFNLVHQAYEVLSDPQ 73
          DYY +L V+R AS E++K AYR+L + +HPDK+  PE K +AER F  V +AYEVLSD +
Sbjct: 3  DYYEVLGVQRHASPEDIKKAYRKLALKWHPDKN--PENKEEAERKFKQVAEAYEVLSDAK 60

Query: 74 TRAIYDIYGKRGLEMEG 90
           R IYD YGK GL   G
Sbjct: 61 KRDIYDKYGKEGLNGGG 77


>gi|5453690 DnaJ (Hsp40) homolog, subfamily B, member 1 [Homo
          sapiens]
          Length = 340

 Score = 78.2 bits (191), Expect = 2e-14
 Identities = 38/78 (48%), Positives = 52/78 (66%), Gaps = 4/78 (5%)

Query: 13 EDYYSLLNVRREASSEELKAAYRRLCMLYHPDKHRDPELKSQAERLFNLVHQAYEVLSDP 72
          +DYY  L + R AS EE+K AYRR  + YHPDK+++P     AE  F  + +AY+VLSDP
Sbjct: 3  KDYYQTLGLARGASDEEIKRAYRRQALRYHPDKNKEP----GAEEKFKEIAEAYDVLSDP 58

Query: 73 QTRAIYDIYGKRGLEMEG 90
          + R I+D YG+ GL+  G
Sbjct: 59 RKREIFDRYGEEGLKGSG 76


>gi|6631085 DnaJ (Hsp40) homolog, subfamily B, member 4 [Homo
          sapiens]
          Length = 337

 Score = 77.4 bits (189), Expect = 3e-14
 Identities = 36/75 (48%), Positives = 52/75 (69%), Gaps = 4/75 (5%)

Query: 13 EDYYSLLNVRREASSEELKAAYRRLCMLYHPDKHRDPELKSQAERLFNLVHQAYEVLSDP 72
          +DYY +L + + AS E++K AYR+  + +HPDK++ P    QAE  F  V +AYEVLSDP
Sbjct: 3  KDYYCILGIEKGASDEDIKKAYRKQALKFHPDKNKSP----QAEEKFKEVAEAYEVLSDP 58

Query: 73 QTRAIYDIYGKRGLE 87
          + R IYD +G+ GL+
Sbjct: 59 KKREIYDQFGEEGLK 73


>gi|201862587 DnaJ (Hsp40) homolog, subfamily B, member 5 isoform 1
           [Homo sapiens]
          Length = 420

 Score = 77.4 bits (189), Expect = 3e-14
 Identities = 34/78 (43%), Positives = 53/78 (67%), Gaps = 4/78 (5%)

Query: 13  EDYYSLLNVRREASSEELKAAYRRLCMLYHPDKHRDPELKSQAERLFNLVHQAYEVLSDP 72
           +DYY +L +   A+ +E+K AYR++ + YHPDK+++P     AE  F  + +AY+VLSDP
Sbjct: 75  KDYYKILGIPSGANEDEIKKAYRKMALKYHPDKNKEP----NAEEKFKEIAEAYDVLSDP 130

Query: 73  QTRAIYDIYGKRGLEMEG 90
           + R +YD YG+ GL+  G
Sbjct: 131 KKRGLYDQYGEEGLKTGG 148


>gi|201862518 DnaJ (Hsp40) homolog, subfamily B, member 5 isoform 2
           [Homo sapiens]
          Length = 382

 Score = 77.4 bits (189), Expect = 3e-14
 Identities = 34/78 (43%), Positives = 53/78 (67%), Gaps = 4/78 (5%)

Query: 13  EDYYSLLNVRREASSEELKAAYRRLCMLYHPDKHRDPELKSQAERLFNLVHQAYEVLSDP 72
           +DYY +L +   A+ +E+K AYR++ + YHPDK+++P     AE  F  + +AY+VLSDP
Sbjct: 37  KDYYKILGIPSGANEDEIKKAYRKMALKYHPDKNKEP----NAEEKFKEIAEAYDVLSDP 92

Query: 73  QTRAIYDIYGKRGLEMEG 90
           + R +YD YG+ GL+  G
Sbjct: 93  KKRGLYDQYGEEGLKTGG 110


>gi|56549115 DnaJ (Hsp40) homolog, subfamily B, member 5 isoform 3
          [Homo sapiens]
          Length = 348

 Score = 77.4 bits (189), Expect = 3e-14
 Identities = 34/78 (43%), Positives = 53/78 (67%), Gaps = 4/78 (5%)

Query: 13 EDYYSLLNVRREASSEELKAAYRRLCMLYHPDKHRDPELKSQAERLFNLVHQAYEVLSDP 72
          +DYY +L +   A+ +E+K AYR++ + YHPDK+++P     AE  F  + +AY+VLSDP
Sbjct: 3  KDYYKILGIPSGANEDEIKKAYRKMALKYHPDKNKEP----NAEEKFKEIAEAYDVLSDP 58

Query: 73 QTRAIYDIYGKRGLEMEG 90
          + R +YD YG+ GL+  G
Sbjct: 59 KKRGLYDQYGEEGLKTGG 76


>gi|21553335 DnaJ (Hsp40) homolog, subfamily B, member 7 [Homo
          sapiens]
          Length = 309

 Score = 75.5 bits (184), Expect = 1e-13
 Identities = 38/77 (49%), Positives = 52/77 (67%), Gaps = 2/77 (2%)

Query: 14 DYYSLLNVRREASSEELKAAYRRLCMLYHPDKHRDPELKSQAERLFNLVHQAYEVLSDPQ 73
          DYY +L ++R AS E++K AY ++ + +HPDK+  PE K +AER F  V +AYEVLS+ +
Sbjct: 3  DYYEVLGLQRYASPEDIKKAYHKVALKWHPDKN--PENKEEAERKFKEVAEAYEVLSNDE 60

Query: 74 TRAIYDIYGKRGLEMEG 90
           R IYD YG  GL   G
Sbjct: 61 KRDIYDKYGTEGLNGGG 77


>gi|88501736 DnaJ (Hsp40) homolog, subfamily B, member 2 isoform a
          [Homo sapiens]
          Length = 277

 Score = 74.7 bits (182), Expect = 2e-13
 Identities = 38/76 (50%), Positives = 51/76 (67%), Gaps = 2/76 (2%)

Query: 15 YYSLLNVRREASSEELKAAYRRLCMLYHPDKHRDPELKSQAERLFNLVHQAYEVLSDPQT 74
          YY +L+V R AS++++K AYRR  + +HPDK+  P+ K  AE+ F  V +AYEVLSD   
Sbjct: 4  YYEILDVPRSASADDIKKAYRRKALQWHPDKN--PDNKEFAEKKFKEVAEAYEVLSDKHK 61

Query: 75 RAIYDIYGKRGLEMEG 90
          R IYD YG+ GL   G
Sbjct: 62 REIYDRYGREGLTGTG 77


>gi|27151736 DnaJ (Hsp40) homolog, subfamily B, member 2 isoform b
          [Homo sapiens]
          Length = 324

 Score = 74.7 bits (182), Expect = 2e-13
 Identities = 38/76 (50%), Positives = 51/76 (67%), Gaps = 2/76 (2%)

Query: 15 YYSLLNVRREASSEELKAAYRRLCMLYHPDKHRDPELKSQAERLFNLVHQAYEVLSDPQT 74
          YY +L+V R AS++++K AYRR  + +HPDK+  P+ K  AE+ F  V +AYEVLSD   
Sbjct: 4  YYEILDVPRSASADDIKKAYRRKALQWHPDKN--PDNKEFAEKKFKEVAEAYEVLSDKHK 61

Query: 75 RAIYDIYGKRGLEMEG 90
          R IYD YG+ GL   G
Sbjct: 62 REIYDRYGREGLTGTG 77


>gi|194328760 DnaJ (Hsp40) homolog, subfamily A, member 4 isoform 2
           [Homo sapiens]
          Length = 397

 Score = 73.2 bits (178), Expect = 6e-13
 Identities = 44/109 (40%), Positives = 63/109 (57%), Gaps = 11/109 (10%)

Query: 15  YYSLLNVRREASSEELKAAYRRLCMLYHPDKHRDPELKSQAERLFNLVHQAYEVLSDPQT 74
           YY +L V+  AS EE+K AYR+L + YHPDK+ D   K      F L+ QAYEVLSDP+ 
Sbjct: 7   YYDILGVKPSASPEEIKKAYRKLALKYHPDKNPDEGEK------FKLISQAYEVLSDPKK 60

Query: 75  RAIYDIYGKRGLEMEGWEVVERRRTPAEIREEF----ERLQREREERRL 119
           R +YD  G++ ++ EG        +P +I + F     R+ RER  + +
Sbjct: 61  RDVYDQGGEQAIK-EGGSGSPSFSSPMDIFDMFFGGGGRMARERRGKNV 108


>gi|194328758 DnaJ (Hsp40) homolog, subfamily A, member 4 isoform 1
           [Homo sapiens]
          Length = 426

 Score = 73.2 bits (178), Expect = 6e-13
 Identities = 44/109 (40%), Positives = 63/109 (57%), Gaps = 11/109 (10%)

Query: 15  YYSLLNVRREASSEELKAAYRRLCMLYHPDKHRDPELKSQAERLFNLVHQAYEVLSDPQT 74
           YY +L V+  AS EE+K AYR+L + YHPDK+ D   K      F L+ QAYEVLSDP+ 
Sbjct: 36  YYDILGVKPSASPEEIKKAYRKLALKYHPDKNPDEGEK------FKLISQAYEVLSDPKK 89

Query: 75  RAIYDIYGKRGLEMEGWEVVERRRTPAEIREEF----ERLQREREERRL 119
           R +YD  G++ ++ EG        +P +I + F     R+ RER  + +
Sbjct: 90  RDVYDQGGEQAIK-EGGSGSPSFSSPMDIFDMFFGGGGRMARERRGKNV 137


>gi|23503241 DnaJ homolog, subfamily B, member 8 [Homo sapiens]
          Length = 232

 Score = 71.6 bits (174), Expect = 2e-12
 Identities = 34/69 (49%), Positives = 50/69 (72%), Gaps = 2/69 (2%)

Query: 14 DYYSLLNVRREASSEELKAAYRRLCMLYHPDKHRDPELKSQAERLFNLVHQAYEVLSDPQ 73
          +YY +L V+  AS E++K AYR+L + +HPDK  +P+ K +AE+ F LV +AYEVLSD +
Sbjct: 3  NYYEVLGVQASASPEDIKKAYRKLALRWHPDK--NPDNKEEAEKKFKLVSEAYEVLSDSK 60

Query: 74 TRAIYDIYG 82
           R++YD  G
Sbjct: 61 KRSLYDRAG 69


>gi|39204547 testis spermatogenesis apoptosis-related protein 6
          [Homo sapiens]
          Length = 316

 Score = 70.1 bits (170), Expect = 5e-12
 Identities = 34/75 (45%), Positives = 50/75 (66%), Gaps = 4/75 (5%)

Query: 13 EDYYSLLNVRREASSEELKAAYRRLCMLYHPDKHRDPELKSQAERLFNLVHQAYEVLSDP 72
          +DYYS+L + R +   ++K AYRRL + +HP K  +P   S AE +F  + +AY+VLSDP
Sbjct: 3  QDYYSVLGITRNSEDAQIKQAYRRLALKHHPLKSNEP---SSAE-IFRQIAEAYDVLSDP 58

Query: 73 QTRAIYDIYGKRGLE 87
            R IYD +G+ GL+
Sbjct: 59 MKRGIYDKFGEEGLK 73


>gi|68077168 DnaJ homology subfamily A member 5 isoform 1 [Homo
          sapiens]
          Length = 576

 Score = 70.1 bits (170), Expect = 5e-12
 Identities = 35/65 (53%), Positives = 45/65 (69%), Gaps = 2/65 (3%)

Query: 15 YYSLLNVRREASSEELKAAYRRLCMLYHPDKHRDPELKSQAERLFNLVHQAYEVLSDPQT 74
          +Y  L VRR+AS EELK AYR+L + +HPDK+ D    ++A   F L+  AY+VLSDPQ 
Sbjct: 4  HYEALGVRRDASEEELKKAYRKLALKWHPDKNLDN--AAEAAEQFKLIQAAYDVLSDPQE 61

Query: 75 RAIYD 79
          RA YD
Sbjct: 62 RAWYD 66


>gi|68077166 DnaJ homology subfamily A member 5 isoform 2 [Homo
          sapiens]
          Length = 531

 Score = 70.1 bits (170), Expect = 5e-12
 Identities = 35/65 (53%), Positives = 45/65 (69%), Gaps = 2/65 (3%)

Query: 15 YYSLLNVRREASSEELKAAYRRLCMLYHPDKHRDPELKSQAERLFNLVHQAYEVLSDPQT 74
          +Y  L VRR+AS EELK AYR+L + +HPDK+ D    ++A   F L+  AY+VLSDPQ 
Sbjct: 4  HYEALGVRRDASEEELKKAYRKLALKWHPDKNLDN--AAEAAEQFKLIQAAYDVLSDPQE 61

Query: 75 RAIYD 79
          RA YD
Sbjct: 62 RAWYD 66


>gi|205360840 DnaJ (Hsp40) homolog, subfamily A, member 3 isoform 2
           [Homo sapiens]
          Length = 453

 Score = 67.8 bits (164), Expect = 3e-11
 Identities = 35/78 (44%), Positives = 47/78 (60%), Gaps = 3/78 (3%)

Query: 10  LDNEDYYSLLNVRREASSEELKAAYRRLCMLYHPDKHRDPELKSQAERLFNLVHQAYEVL 69
           L  EDYY +L V R AS +E+K AY +L   YHPD ++D     +A+  F+ + +AYEVL
Sbjct: 89  LAKEDYYQILGVPRNASQKEIKKAYYQLAKKYHPDTNKD---DPKAKEKFSQLAEAYEVL 145

Query: 70  SDPQTRAIYDIYGKRGLE 87
           SD   R  YD YG  G +
Sbjct: 146 SDEVKRKQYDAYGSAGFD 163


>gi|205360838 DnaJ (Hsp40) homolog, subfamily A, member 3 isoform 1
           [Homo sapiens]
          Length = 480

 Score = 67.8 bits (164), Expect = 3e-11
 Identities = 35/78 (44%), Positives = 47/78 (60%), Gaps = 3/78 (3%)

Query: 10  LDNEDYYSLLNVRREASSEELKAAYRRLCMLYHPDKHRDPELKSQAERLFNLVHQAYEVL 69
           L  EDYY +L V R AS +E+K AY +L   YHPD ++D     +A+  F+ + +AYEVL
Sbjct: 89  LAKEDYYQILGVPRNASQKEIKKAYYQLAKKYHPDTNKD---DPKAKEKFSQLAEAYEVL 145

Query: 70  SDPQTRAIYDIYGKRGLE 87
           SD   R  YD YG  G +
Sbjct: 146 SDEVKRKQYDAYGSAGFD 163


>gi|7706495 DnaJ (Hsp40) homolog, subfamily B, member 11 precursor
          [Homo sapiens]
          Length = 358

 Score = 65.5 bits (158), Expect = 1e-10
 Identities = 33/74 (44%), Positives = 47/74 (63%), Gaps = 3/74 (4%)

Query: 14 DYYSLLNVRREASSEELKAAYRRLCMLYHPDKHRDPELKSQAERLFNLVHQAYEVLSDPQ 73
          D+Y +L V R AS +++K AYR+L +  HPD++ D     QA+  F  +  AYEVLSD +
Sbjct: 25 DFYKILGVPRSASIKDIKKAYRKLALQLHPDRNPD---DPQAQEKFQDLGAAYEVLSDSE 81

Query: 74 TRAIYDIYGKRGLE 87
           R  YD YG+ GL+
Sbjct: 82 KRKQYDTYGEEGLK 95


>gi|194306642 DnaJ (Hsp40) homolog, subfamily B, member 12 [Homo
           sapiens]
          Length = 409

 Score = 65.1 bits (157), Expect = 2e-10
 Identities = 33/70 (47%), Positives = 43/70 (61%), Gaps = 4/70 (5%)

Query: 13  EDYYSLLNVRREASSEELKAAYRRLCMLYHPDKHRDPELKSQAERLFNLVHQAYEVLSDP 72
           +DYY +L V R AS E+LK AYRRL + +HPDK+  P     A   F  +  AY VLS+P
Sbjct: 143 KDYYEILGVSRGASDEDLKKAYRRLALKFHPDKNHAP----GATEAFKAIGTAYAVLSNP 198

Query: 73  QTRAIYDIYG 82
           + R  YD +G
Sbjct: 199 EKRKQYDQFG 208


>gi|194306640 DnaJ (Hsp40) homolog, subfamily B, member 12 [Homo
           sapiens]
          Length = 409

 Score = 65.1 bits (157), Expect = 2e-10
 Identities = 33/70 (47%), Positives = 43/70 (61%), Gaps = 4/70 (5%)

Query: 13  EDYYSLLNVRREASSEELKAAYRRLCMLYHPDKHRDPELKSQAERLFNLVHQAYEVLSDP 72
           +DYY +L V R AS E+LK AYRRL + +HPDK+  P     A   F  +  AY VLS+P
Sbjct: 143 KDYYEILGVSRGASDEDLKKAYRRLALKFHPDKNHAP----GATEAFKAIGTAYAVLSNP 198

Query: 73  QTRAIYDIYG 82
           + R  YD +G
Sbjct: 199 EKRKQYDQFG 208


>gi|4504511 DnaJ (Hsp40) homolog, subfamily A, member 1 [Homo
           sapiens]
          Length = 397

 Score = 64.3 bits (155), Expect = 3e-10
 Identities = 41/109 (37%), Positives = 61/109 (55%), Gaps = 12/109 (11%)

Query: 15  YYSLLNVRREASSEELKAAYRRLCMLYHPDKHRDPELKSQAERLFNLVHQAYEVLSDPQT 74
           YY +L V+  A+ EELK AYR+L + YHPDK+ +   K      F  + QAYEVLSD + 
Sbjct: 7   YYDVLGVKPNATQEELKKAYRKLALKYHPDKNPNEGEK------FKQISQAYEVLSDAKK 60

Query: 75  RAIYDIYGKRGLEMEGWEVVERRRTPAEIREEF----ERLQREREERRL 119
           R +YD  G++ ++  G        +P +I + F     R+QRER  + +
Sbjct: 61  RELYDKGGEQAIKEGG--AGGGFGSPMDIFDMFFGGGGRMQRERRGKNV 107


>gi|24308127 DnaJ (Hsp40) homolog, subfamily C, member 10 [Homo
           sapiens]
          Length = 793

 Score = 63.9 bits (154), Expect = 4e-10
 Identities = 32/76 (42%), Positives = 49/76 (64%), Gaps = 3/76 (3%)

Query: 12  NEDYYSLLNVRREASSEELKAAYRRLCMLYHPDKHRDPELKSQAERLFNLVHQAYEVLSD 71
           ++D+YSLL V + ASS E++ A+++L +  HPDK+ +      A   F  +++AYEVL D
Sbjct: 33  DQDFYSLLGVSKTASSREIRQAFKKLALKLHPDKNPN---NPNAHGDFLKINRAYEVLKD 89

Query: 72  PQTRAIYDIYGKRGLE 87
              R  YD YG++GLE
Sbjct: 90  EDLRKKYDKYGEKGLE 105


>gi|56687498 DnaJ (Hsp40) homolog, subfamily C, member 16 [Homo
           sapiens]
          Length = 782

 Score = 63.5 bits (153), Expect = 5e-10
 Identities = 34/85 (40%), Positives = 54/85 (63%), Gaps = 5/85 (5%)

Query: 14  DYYSLLNVRREASSEELKAAYRRLCMLYHPDKHRDPELKSQAERLFNLVHQAYEVLSDPQ 73
           D Y +L V R AS  ++K AY++L   +HPDK++DP     AE  F  + +AYE+LS+ +
Sbjct: 29  DPYRVLGVSRTASQADIKKAYKKLAREWHPDKNKDP----GAEDKFIQISKAYEILSNEE 84

Query: 74  TRAIYDIYGKRGLEMEGWEVVERRR 98
            R+ YD YG  G E +G++  +++R
Sbjct: 85  KRSNYDQYGDAG-ENQGYQKQQQQR 108


>gi|221219056 DnaJ (Hsp40) homolog, subfamily C, member 7 isoform 2
           [Homo sapiens]
          Length = 438

 Score = 63.2 bits (152), Expect = 6e-10
 Identities = 27/69 (39%), Positives = 46/69 (66%), Gaps = 2/69 (2%)

Query: 13  EDYYSLLNVRREASSEELKAAYRRLCMLYHPDKH--RDPELKSQAERLFNLVHQAYEVLS 70
           +DYY +L V + AS +E+K AYR+  +++HPD+H     E++ + E+ F  V +A+ +LS
Sbjct: 324 KDYYKILGVDKNASEDEIKKAYRKRALMHHPDRHSGASAEVQKEEEKKFKEVGEAFTILS 383

Query: 71  DPQTRAIYD 79
           DP+ +  YD
Sbjct: 384 DPKKKTRYD 392


>gi|221219053 DnaJ (Hsp40) homolog, subfamily C, member 7 isoform 1
           [Homo sapiens]
          Length = 494

 Score = 63.2 bits (152), Expect = 6e-10
 Identities = 27/69 (39%), Positives = 46/69 (66%), Gaps = 2/69 (2%)

Query: 13  EDYYSLLNVRREASSEELKAAYRRLCMLYHPDKH--RDPELKSQAERLFNLVHQAYEVLS 70
           +DYY +L V + AS +E+K AYR+  +++HPD+H     E++ + E+ F  V +A+ +LS
Sbjct: 380 KDYYKILGVDKNASEDEIKKAYRKRALMHHPDRHSGASAEVQKEEEKKFKEVGEAFTILS 439

Query: 71  DPQTRAIYD 79
           DP+ +  YD
Sbjct: 440 DPKKKTRYD 448


>gi|5453980 DnaJ (Hsp40) homolog, subfamily C, member 3 [Homo
           sapiens]
          Length = 504

 Score = 62.8 bits (151), Expect = 8e-10
 Identities = 29/72 (40%), Positives = 45/72 (62%)

Query: 8   EELDNEDYYSLLNVRREASSEELKAAYRRLCMLYHPDKHRDPELKSQAERLFNLVHQAYE 67
           ++    DYY +L V+R A  +E+  AYR+L + +HPD  ++ E K +AE+ F  +  A E
Sbjct: 388 KQSQKRDYYKILGVKRNAKKQEIIKAYRKLALQWHPDNFQNEEEKKKAEKKFIDIAAAKE 447

Query: 68  VLSDPQTRAIYD 79
           VLSDP+ R  +D
Sbjct: 448 VLSDPEMRKKFD 459


>gi|9558755 DnaJ (Hsp40) homolog, subfamily B, member 9 [Homo
          sapiens]
          Length = 223

 Score = 62.4 bits (150), Expect = 1e-09
 Identities = 31/78 (39%), Positives = 46/78 (58%), Gaps = 4/78 (5%)

Query: 5  LSEEELDNEDYYSLLNVRREASSEELKAAYRRLCMLYHPDKHRDPELKSQAERLFNLVHQ 64
          ++E  L ++ YY +L V + AS  ++K A+ +L M YHPDK++ P+    AE  F  + +
Sbjct: 17 ITELILASKSYYDILGVPKSASERQIKKAFHKLAMKYHPDKNKSPD----AEAKFREIAE 72

Query: 65 AYEVLSDPQTRAIYDIYG 82
          AYE LSD   R  YD  G
Sbjct: 73 AYETLSDANRRKEYDTLG 90


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.318    0.134    0.383 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 19,189,639
Number of Sequences: 37866
Number of extensions: 817907
Number of successful extensions: 4710
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 78
Number of HSP's successfully gapped in prelim test: 59
Number of HSP's that attempted gapping in prelim test: 4326
Number of HSP's gapped (non-prelim): 358
length of query: 559
length of database: 18,247,518
effective HSP length: 107
effective length of query: 452
effective length of database: 14,195,856
effective search space: 6416526912
effective search space used: 6416526912
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 64 (29.3 bits)

Search results were obtained with NCBI BLAST and RefSeq entries.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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