Guide to the Human Genome
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Name: DDIT4L Sequence: fasta or formatted (193aa) NCBI GI: 21687001
Description:

DNA-damage-inducible transcript 4-like

Referenced in:

Oxygen Sensing and Hemoglobin

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             1.6          3           1
 C cysteine            4.7          9           1
 D aspartate           4.1          8           1
 E glutamate           7.3         14           2
 F phenylalanine       5.7         11           3
 G glycine             5.2         10           1
 H histidine           1.0          2           1
 I isoleucine          4.1          8           1
 K lysine              6.7         13           3
 L leucine            12.4         24           2
 M methionine          1.6          3           1
 N asparagine          4.1          8           1
 P proline             3.6          7           1
 Q glutamine           2.6          5           1
 R arginine            5.2         10           2
 S serine             12.4         24           2
 T threonine           5.7         11           2
 V valine              8.8         17           2
 W tryptophan          1.0          2           1
 Y tyrosine            2.1          4           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   DNA-damage-inducible transcript 4-like 
DDIT4                 0.222   RTP801 
AMD1                  0.016   adenosylmethionine decarboxylase 1 isoform 2 
AMD1                  0.016   adenosylmethionine decarboxylase 1 isoform 1 precurs...
ZNF804B               0.016   zinc finger protein 804B 
USP34                 0.008   ubiquitin specific protease 34 
LZTS2                 0.008   leucine zipper, putative tumor suppressor 2 
RAD51AP1              0.008   RAD51 associated protein 1 isoform a 
KIAA0406              0.005   hypothetical protein LOC9675 
WWC2                  0.005   WW and C2 domain containing 2 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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