Guide to the Human Genome
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Name: TXNL4B Sequence: fasta or formatted (149aa) NCBI GI: 214832254
Description:

thioredoxin-like 4B

Referenced in:

Glutathione Pathways

Other entries for this name:
alt mRNA [149aa] thioredoxin-like 4B
alt mRNA [149aa] thioredoxin-like 4B
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             4.0          6           2
 C cysteine            0.7          1           1
 D aspartate          10.7         16           2
 E glutamate           2.7          4           1
 F phenylalanine       6.0          9           3
 G glycine             4.0          6           1
 H histidine           1.3          2           1
 I isoleucine          8.1         12           1
 K lysine              9.4         14           2
 L leucine             9.4         14           2
 M methionine          2.7          4           1
 N asparagine          1.3          2           1
 P proline             4.7          7           1
 Q glutamine           5.4          8           1
 R arginine            2.7          4           1
 S serine              8.1         12           2
 T threonine           5.4          8           1
 V valine              8.1         12           1
 W tryptophan          0.0          0           0
 Y tyrosine            5.4          8           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   thioredoxin-like 4B 
TXNL4B                1.000   thioredoxin-like 4B 
TXNL4B                1.000   thioredoxin-like 4B 
TXNL4A                0.319   thioredoxin-like 4A 
LOC100131482          0.176   PREDICTED: similar to hCG1643669 
LOC100131482          0.176   PREDICTED: similar to hCG1643669 
LOC100131482          0.176   PREDICTED: hypothetical protein LOC100131482 
GLRX3                 0.051   glutaredoxin 3 
ERP44                 0.018   thioredoxin domain containing 4 (endoplasmic reticul...
USP54                 0.018   ubiquitin specific peptidase 54 
FN1                   0.011   fibronectin 1 isoform 3 preproprotein 
FN1                   0.011   fibronectin 1 isoform 1 preproprotein 
FN1                   0.011   fibronectin 1 isoform 4 preproprotein 
FN1                   0.011   fibronectin 1 isoform 5 preproprotein 
FN1                   0.011   fibronectin 1 isoform 2 preproprotein 
FN1                   0.011   fibronectin 1 isoform 6 preproprotein 
NUP88                 0.011   nucleoporin 88kDa 
P2RX3                 0.007   purinergic receptor P2X3 
XRCC4                 0.007   X-ray repair cross complementing protein 4 isoform 1...
XRCC4                 0.007   X-ray repair cross complementing protein 4 isoform 1 ...
XRCC4                 0.007   X-ray repair cross complementing protein 4 isoform 2...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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