Search of human proteins with 11345458

Search of human proteins with 11345458

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|11345458 hypothetical protein LOC60526 [Homo sapiens]
         (325 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|11345458 hypothetical protein LOC60526 [Homo sapiens]              671   0.0  
gi|23957702 transmembrane protease, serine 6 [Homo sapiens]            29   5.0  
gi|156447044 lipase-like, ab-hydrolase domain containing 4 [Homo...    29   5.0  
gi|32967601 ankyrin 3 isoform 1 [Homo sapiens]                         29   6.5  
gi|56121818 dolichyl pyrophosphate Glc1Man9GlcNAc2 alpha-1,3-glu...    29   6.5  
gi|169234787 hypothetical protein LOC55683 isoform a [Homo sapiens]    29   6.5  
gi|21361734 hypothetical protein LOC55683 isoform b [Homo sapiens]     29   6.5  
gi|6912484 lysophospholipase 3 (lysosomal phospholipase A2) [Hom...    28   8.5  
gi|24308336 hypothetical protein LOC84553 [Homo sapiens]               28   8.5  

>gi|11345458 hypothetical protein LOC60526 [Homo sapiens]
          Length = 325

 Score =  671 bits (1732), Expect = 0.0
 Identities = 325/325 (100%), Positives = 325/325 (100%)

Query: 1   MDSELKEEIPVHEEFILCGGAETQVLKCGPWTDLFHDQSVKRPKLLIFIIPGNPGFSAFY 60
           MDSELKEEIPVHEEFILCGGAETQVLKCGPWTDLFHDQSVKRPKLLIFIIPGNPGFSAFY
Sbjct: 1   MDSELKEEIPVHEEFILCGGAETQVLKCGPWTDLFHDQSVKRPKLLIFIIPGNPGFSAFY 60

Query: 61  VPFAKALYSLTNRRFPVWTISHAGHALAPKDKKILTTSEDSNAQEIKDIYGLNGQIEHKL 120
           VPFAKALYSLTNRRFPVWTISHAGHALAPKDKKILTTSEDSNAQEIKDIYGLNGQIEHKL
Sbjct: 61  VPFAKALYSLTNRRFPVWTISHAGHALAPKDKKILTTSEDSNAQEIKDIYGLNGQIEHKL 120

Query: 121 AFLRTHVPKDMKLVLIGHSIGSYFTLQMLKRVPELPVIRAFLLFPTIERMSESPNGRIAT 180
           AFLRTHVPKDMKLVLIGHSIGSYFTLQMLKRVPELPVIRAFLLFPTIERMSESPNGRIAT
Sbjct: 121 AFLRTHVPKDMKLVLIGHSIGSYFTLQMLKRVPELPVIRAFLLFPTIERMSESPNGRIAT 180

Query: 181 PLLCWFRYVLYVTGYLLLKPCPETIKSLLIRRGLQVMNLENEFSPLNILEPFCLANAAYL 240
           PLLCWFRYVLYVTGYLLLKPCPETIKSLLIRRGLQVMNLENEFSPLNILEPFCLANAAYL
Sbjct: 181 PLLCWFRYVLYVTGYLLLKPCPETIKSLLIRRGLQVMNLENEFSPLNILEPFCLANAAYL 240

Query: 241 GGQEMMEVVKRDDETIKEHLCKLTFYYGTIDPWCPKEYYEDIKKDFPEGDIRLCEKNIPH 300
           GGQEMMEVVKRDDETIKEHLCKLTFYYGTIDPWCPKEYYEDIKKDFPEGDIRLCEKNIPH
Sbjct: 241 GGQEMMEVVKRDDETIKEHLCKLTFYYGTIDPWCPKEYYEDIKKDFPEGDIRLCEKNIPH 300

Query: 301 AFITHFNQEMADMIADSLKDDLSKM 325
           AFITHFNQEMADMIADSLKDDLSKM
Sbjct: 301 AFITHFNQEMADMIADSLKDDLSKM 325


>gi|23957702 transmembrane protease, serine 6 [Homo sapiens]
          Length = 811

 Score = 29.3 bits (64), Expect = 5.0
 Identities = 12/38 (31%), Positives = 22/38 (57%)

Query: 181 PLLCWFRYVLYVTGYLLLKPCPETIKSLLIRRGLQVMN 218
           PL C+F ++L +  +  L   PE +++LL+   L  +N
Sbjct: 147 PLTCFFWFILQIPEHRRLMLSPEVVQALLVEELLSTVN 184


>gi|156447044 lipase-like, ab-hydrolase domain containing 4 [Homo
           sapiens]
          Length = 398

 Score = 29.3 bits (64), Expect = 5.0
 Identities = 28/104 (26%), Positives = 46/104 (44%), Gaps = 9/104 (8%)

Query: 68  YSLTNRRFPVWTISHAGHALAPKDKKILTTSEDSNAQEIKDI--YGLNGQIEHKLAFLRT 125
           + L +  + VW  +  G+  + + K +  T E   A    ++  Y L G I+    F+  
Sbjct: 105 FLLADAGYDVWMGNSRGNTWSRRHKTLSETDEKFWAFSFDEMAKYDLPGVID----FIVN 160

Query: 126 HVPKDMKLVLIGHSIGSYFTLQMLKRVPELP--VIRAFLLFPTI 167
              ++ KL  IGHS+G+         +PEL   +   F L PTI
Sbjct: 161 KTGQE-KLYFIGHSLGTTIGFVAFSTMPELAQRIKMNFALGPTI 203


>gi|32967601 ankyrin 3 isoform 1 [Homo sapiens]
          Length = 4377

 Score = 28.9 bits (63), Expect = 6.5
 Identities = 17/45 (37%), Positives = 26/45 (57%), Gaps = 1/45 (2%)

Query: 87   LAPKDKKILTTSEDSNAQEI-KDIYGLNGQIEHKLAFLRTHVPKD 130
            LAP   K+ T S  S++QEI KD+  +   +    A L+T VP++
Sbjct: 1882 LAPSALKLSTPSSLSSSQEILKDVAEMKEDLMRMTAILQTDVPEE 1926


>gi|56121818 dolichyl pyrophosphate Glc1Man9GlcNAc2
           alpha-1,3-glucosyltransferase isoform a [Homo sapiens]
          Length = 526

 Score = 28.9 bits (63), Expect = 6.5
 Identities = 29/111 (26%), Positives = 40/111 (36%), Gaps = 8/111 (7%)

Query: 130 DMKLVLIGHSIGSYFTLQMLKRVPELPV-IRAFLLFPTIERMSESPNGRIATPLLCWFRY 188
           D  + LI  + G Y    +L   PELP+ I   LLF      S     R   PL  W   
Sbjct: 402 DASIFLILTTTGHYSLFPLLFTAPELPIKILLMLLFTIYSISSLKTLFRKEKPLFNWME- 460

Query: 189 VLYVTGYLLLKPCPETIKSLLIRRGLQVMNLENEFSPLNILEPFCLANAAY 239
             Y+ G   L+ C E +             ++  F PL +   +C     Y
Sbjct: 461 TFYLLGLGPLEVCCEFVFP------FTSWKVKYPFIPLLLTSVYCAVGITY 505


>gi|169234787 hypothetical protein LOC55683 isoform a [Homo sapiens]
          Length = 878

 Score = 28.9 bits (63), Expect = 6.5
 Identities = 50/195 (25%), Positives = 77/195 (39%), Gaps = 26/195 (13%)

Query: 20  GAET-QVLKCGPWTD----LFHDQSVKRP-KLLIFIIPGNPGFSAFYVPFAKALYSLTNR 73
           GAE   +L   PW      L H++  K P   LI I    P  S F           T+R
Sbjct: 241 GAEALSLLLKRPWDPAVGVLSHNKPSKLPGSPLILIASSGPSSSVFP----------TSR 290

Query: 74  RFPVWT--ISHAGHALAPKDKKILTTSEDSNAQEIKDIYGLNGQIEHKLAFLRTHVPKDM 131
           R   W   +S  G  + P    +L     S    ++ +  + G +  K+  + +H P   
Sbjct: 291 RHRFWQSQLSCLGKVI-PVATHLLNNG--SGVGVLQCLEHMIGAVRSKVLEIHSHFPHK- 346

Query: 132 KLVLIGHSIGSYFTLQMLKRVPELPVIRAFLLFPTIERMSESPNGRIATPLLCWFRYVLY 191
            ++LIG + G+     +   V E       L FP +    + P G +  PLL     VL+
Sbjct: 347 PIILIGWNTGALVACHV--SVMEYVTAVVCLGFPLLT--VDGPRGDVDDPLLDMKTPVLF 402

Query: 192 VTGYLLLKPCPETIK 206
           V G   L+  PE ++
Sbjct: 403 VIGQNSLQCHPEAME 417


>gi|21361734 hypothetical protein LOC55683 isoform b [Homo sapiens]
          Length = 791

 Score = 28.9 bits (63), Expect = 6.5
 Identities = 50/195 (25%), Positives = 77/195 (39%), Gaps = 26/195 (13%)

Query: 20  GAET-QVLKCGPWTD----LFHDQSVKRP-KLLIFIIPGNPGFSAFYVPFAKALYSLTNR 73
           GAE   +L   PW      L H++  K P   LI I    P  S F           T+R
Sbjct: 154 GAEALSLLLKRPWDPAVGVLSHNKPSKLPGSPLILIASSGPSSSVFP----------TSR 203

Query: 74  RFPVWT--ISHAGHALAPKDKKILTTSEDSNAQEIKDIYGLNGQIEHKLAFLRTHVPKDM 131
           R   W   +S  G  + P    +L     S    ++ +  + G +  K+  + +H P   
Sbjct: 204 RHRFWQSQLSCLGKVI-PVATHLLNNG--SGVGVLQCLEHMIGAVRSKVLEIHSHFPHK- 259

Query: 132 KLVLIGHSIGSYFTLQMLKRVPELPVIRAFLLFPTIERMSESPNGRIATPLLCWFRYVLY 191
            ++LIG + G+     +   V E       L FP +    + P G +  PLL     VL+
Sbjct: 260 PIILIGWNTGALVACHV--SVMEYVTAVVCLGFPLLT--VDGPRGDVDDPLLDMKTPVLF 315

Query: 192 VTGYLLLKPCPETIK 206
           V G   L+  PE ++
Sbjct: 316 VIGQNSLQCHPEAME 330


>gi|6912484 lysophospholipase 3 (lysosomal phospholipase A2) [Homo
           sapiens]
          Length = 412

 Score = 28.5 bits (62), Expect = 8.5
 Identities = 14/33 (42%), Positives = 22/33 (66%), Gaps = 3/33 (9%)

Query: 133 LVLIGHSIGSYFTLQMLKRVPEL---PVIRAFL 162
           +VL+ HS+G+ +TL  L+R P+      IRAF+
Sbjct: 192 VVLVAHSMGNMYTLYFLQRQPQAWKDKYIRAFV 224


>gi|24308336 hypothetical protein LOC84553 [Homo sapiens]
          Length = 409

 Score = 28.5 bits (62), Expect = 8.5
 Identities = 20/65 (30%), Positives = 31/65 (47%), Gaps = 9/65 (13%)

Query: 185 WFRYVLYVTGYLLLKPCPETIKSLLIRRGLQVMN-----LENEFSPLN----ILEPFCLA 235
           W++  LY+TG  LL      +  LL+ R  Q ++     + ++F+  N     L PFCL 
Sbjct: 62  WWKKTLYLTGGALLAAAAYLLHELLVIRKQQEIDSKDAIILHQFARPNNGVPSLSPFCLK 121

Query: 236 NAAYL 240
              YL
Sbjct: 122 METYL 126


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.323    0.141    0.436 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 12,647,885
Number of Sequences: 37866
Number of extensions: 562778
Number of successful extensions: 988
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 7
Number of HSP's that attempted gapping in prelim test: 986
Number of HSP's gapped (non-prelim): 9
length of query: 325
length of database: 18,247,518
effective HSP length: 102
effective length of query: 223
effective length of database: 14,385,186
effective search space: 3207896478
effective search space used: 3207896478
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 62 (28.5 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.