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Search of human proteins with 21359920
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|21359920 ropporin [Homo sapiens]
(212 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|21359920 ropporin [Homo sapiens] 426 e-120
gi|59891409 ropporin, rhophilin associated protein 1B [Homo sapi... 409 e-114
gi|17572807 ropporin 1-like [Homo sapiens] 161 4e-40
gi|4758958 cAMP-dependent protein kinase, regulatory subunit alp... 37 0.012
gi|154350241 brefeldin A-inhibited guanine nucleotide-exchange p... 29 2.6
gi|47132585 cAMP-dependent protein kinase, regulatory subunit be... 29 2.6
gi|209863002 MAP-kinase activating death domain-containing prote... 28 4.4
gi|209862998 MAP-kinase activating death domain-containing prote... 28 4.4
gi|209862994 MAP-kinase activating death domain-containing prote... 28 4.4
gi|18860873 MAP-kinase activating death domain-containing protei... 28 4.4
gi|209862987 MAP-kinase activating death domain-containing prote... 28 4.4
gi|209862983 MAP-kinase activating death domain-containing prote... 28 4.4
gi|209862979 MAP-kinase activating death domain-containing prote... 28 4.4
gi|209862975 MAP-kinase activating death domain-containing prote... 28 4.4
gi|209862971 MAP-kinase activating death domain-containing prote... 28 4.4
gi|209571517 MAP-kinase activating death domain-containing prote... 28 4.4
gi|114431236 zinc finger protein 462 [Homo sapiens] 28 7.5
gi|40217847 activating signal cointegrator 1 complex subunit 3-l... 28 7.5
>gi|21359920 ropporin [Homo sapiens]
Length = 212
Score = 426 bits (1094), Expect = e-120
Identities = 212/212 (100%), Positives = 212/212 (100%)
Query: 1 MAQTDKPTCIPPELPKMLKEFAKAAIRVQPQDLIQWAADYFEALSRGETPPVRERSERVA 60
MAQTDKPTCIPPELPKMLKEFAKAAIRVQPQDLIQWAADYFEALSRGETPPVRERSERVA
Sbjct: 1 MAQTDKPTCIPPELPKMLKEFAKAAIRVQPQDLIQWAADYFEALSRGETPPVRERSERVA 60
Query: 61 LCNRAELTPELLKILHSQVAGRLIIRAEELAQMWKVVNLPTDLFNSVMNVGRFTEEIEWL 120
LCNRAELTPELLKILHSQVAGRLIIRAEELAQMWKVVNLPTDLFNSVMNVGRFTEEIEWL
Sbjct: 61 LCNRAELTPELLKILHSQVAGRLIIRAEELAQMWKVVNLPTDLFNSVMNVGRFTEEIEWL 120
Query: 121 KFLALACSALGVTITKTLKIVCEVLSCDHNGGSPRIPFSTFQFLYTYIAKVDGEISASHV 180
KFLALACSALGVTITKTLKIVCEVLSCDHNGGSPRIPFSTFQFLYTYIAKVDGEISASHV
Sbjct: 121 KFLALACSALGVTITKTLKIVCEVLSCDHNGGSPRIPFSTFQFLYTYIAKVDGEISASHV 180
Query: 181 SRMLNYMEQEVIGPDGIITVNDFTQNPRVQLE 212
SRMLNYMEQEVIGPDGIITVNDFTQNPRVQLE
Sbjct: 181 SRMLNYMEQEVIGPDGIITVNDFTQNPRVQLE 212
>gi|59891409 ropporin, rhophilin associated protein 1B [Homo
sapiens]
Length = 212
Score = 409 bits (1050), Expect = e-114
Identities = 203/212 (95%), Positives = 206/212 (97%)
Query: 1 MAQTDKPTCIPPELPKMLKEFAKAAIRVQPQDLIQWAADYFEALSRGETPPVRERSERVA 60
MAQTDKPTCIPPELPKMLKEFAKAAIR QPQDLIQW ADYFEALSRGETPPVRERSERVA
Sbjct: 1 MAQTDKPTCIPPELPKMLKEFAKAAIRAQPQDLIQWGADYFEALSRGETPPVRERSERVA 60
Query: 61 LCNRAELTPELLKILHSQVAGRLIIRAEELAQMWKVVNLPTDLFNSVMNVGRFTEEIEWL 120
LCN AELTPELLKILHSQVAGRLIIRAEELAQMWKVVNLPTDLFNSVMNVGRFTEEIEWL
Sbjct: 61 LCNWAELTPELLKILHSQVAGRLIIRAEELAQMWKVVNLPTDLFNSVMNVGRFTEEIEWL 120
Query: 121 KFLALACSALGVTITKTLKIVCEVLSCDHNGGSPRIPFSTFQFLYTYIAKVDGEISASHV 180
KFLALACSALGVTITKTLKIVCEVLSCDHNGG PRIPFSTFQFLYTYIA+VDGEI ASHV
Sbjct: 121 KFLALACSALGVTITKTLKIVCEVLSCDHNGGLPRIPFSTFQFLYTYIAEVDGEICASHV 180
Query: 181 SRMLNYMEQEVIGPDGIITVNDFTQNPRVQLE 212
SRMLNY+EQEVIGPDG+ITVNDFTQNPRV LE
Sbjct: 181 SRMLNYIEQEVIGPDGLITVNDFTQNPRVWLE 212
>gi|17572807 ropporin 1-like [Homo sapiens]
Length = 230
Score = 161 bits (407), Expect = 4e-40
Identities = 82/206 (39%), Positives = 126/206 (61%), Gaps = 3/206 (1%)
Query: 10 IPPELPKMLKEFAKAAIRVQPQDLIQWAADYFEALSRGETPPVRERSERVALCNRAE--L 67
IPPELP +LK+F KAAIR QP D+++W+A YF ALSRG+ PV++R E + + L
Sbjct: 15 IPPELPDILKQFTKAAIRTQPADVLRWSAGYFSALSRGDPLPVKDRMEMPTATQKTDTGL 74
Query: 68 TPELLKILHSQVAGRLIIRAEELAQMWKVVNLPTDLFNSVMNVGRFTEEIEWLKFLALAC 127
T LLK+LH Q + + +L Q WK + LP + F +++ + +I+W+ FLAL C
Sbjct: 75 TQGLLKVLHKQCHHKRYVELTDLEQKWKNLCLPKEKFKALLQLDPCENKIKWINFLALGC 134
Query: 128 SALGVTITKTLKIVCEVLSCDHNGGSPRIPFSTFQFLYTYIAKVDGEISASHVSRMLNYM 187
S LG ++ LK +CE+L+ D GG RIPF TF ++Y Y+A++D ++S L +
Sbjct: 135 SMLGGSLNTALKHLCEILTDDPEGGPARIPFKTFSYVYRYLARLDSDVSPLETESYLASL 194
Query: 188 EQEV-IGPDGIITVNDFTQNPRVQLE 212
++ + +G+I ++DF R LE
Sbjct: 195 KENIDARKNGMIGLSDFFFPKRKLLE 220
>gi|4758958 cAMP-dependent protein kinase, regulatory subunit
alpha 2 [Homo sapiens]
Length = 404
Score = 37.0 bits (84), Expect = 0.012
Identities = 15/41 (36%), Positives = 24/41 (58%)
Query: 10 IPPELPKMLKEFAKAAIRVQPQDLIQWAADYFEALSRGETP 50
IPP L ++L+ + +R QP DL+++A +YF L P
Sbjct: 6 IPPGLTELLQGYTVEVLRQQPPDLVEFAVEYFTRLREARAP 46
>gi|154350241 brefeldin A-inhibited guanine nucleotide-exchange
protein 3 [Homo sapiens]
Length = 2177
Score = 29.3 bits (64), Expect = 2.6
Identities = 18/39 (46%), Positives = 23/39 (58%), Gaps = 5/39 (12%)
Query: 113 FTEEIEWLKFLALACSALGVTITKTLKIVCEVLSCDHNG 151
FTEE+ W LAC AL + TLK V ++L C H+G
Sbjct: 1599 FTEEM-W----RLACCALQDAFSATLKPVKDLLGCFHSG 1632
>gi|47132585 cAMP-dependent protein kinase, regulatory subunit
beta 2 [Homo sapiens]
Length = 418
Score = 29.3 bits (64), Expect = 2.6
Identities = 13/37 (35%), Positives = 22/37 (59%)
Query: 10 IPPELPKMLKEFAKAAIRVQPQDLIQWAADYFEALSR 46
IP L ++L+ F +R QP DL+++A +F L +
Sbjct: 5 IPAGLTELLQGFTVEVLRHQPADLLEFALQHFTRLQQ 41
>gi|209863002 MAP-kinase activating death domain-containing protein
isoform j [Homo sapiens]
Length = 1541
Score = 28.5 bits (62), Expect = 4.4
Identities = 17/55 (30%), Positives = 24/55 (43%), Gaps = 8/55 (14%)
Query: 141 VCEVLSCDHNGGSPRIPFSTFQFLYTYIAKVDGEISASHVSRMLNYMEQEVIGPD 195
V E++ CD NG +P + T L G+ S + + N E E GPD
Sbjct: 642 VSEMMKCDINGDTPNVDPLTHAAL--------GDASEVEIDELQNQKEAEEPGPD 688
>gi|209862998 MAP-kinase activating death domain-containing protein
isoform i [Homo sapiens]
Length = 1544
Score = 28.5 bits (62), Expect = 4.4
Identities = 17/55 (30%), Positives = 24/55 (43%), Gaps = 8/55 (14%)
Query: 141 VCEVLSCDHNGGSPRIPFSTFQFLYTYIAKVDGEISASHVSRMLNYMEQEVIGPD 195
V E++ CD NG +P + T L G+ S + + N E E GPD
Sbjct: 642 VSEMMKCDINGDTPNVDPLTHAAL--------GDASEVEIDELQNQKEAEEPGPD 688
>gi|209862994 MAP-kinase activating death domain-containing protein
isoform d [Homo sapiens]
Length = 1647
Score = 28.5 bits (62), Expect = 4.4
Identities = 17/55 (30%), Positives = 24/55 (43%), Gaps = 8/55 (14%)
Query: 141 VCEVLSCDHNGGSPRIPFSTFQFLYTYIAKVDGEISASHVSRMLNYMEQEVIGPD 195
V E++ CD NG +P + T L G+ S + + N E E GPD
Sbjct: 642 VSEMMKCDINGDTPNVDPLTHAAL--------GDASEVEIDELQNQKEAEEPGPD 688
>gi|18860873 MAP-kinase activating death domain-containing protein
isoform g [Homo sapiens]
Length = 1581
Score = 28.5 bits (62), Expect = 4.4
Identities = 17/55 (30%), Positives = 24/55 (43%), Gaps = 8/55 (14%)
Query: 141 VCEVLSCDHNGGSPRIPFSTFQFLYTYIAKVDGEISASHVSRMLNYMEQEVIGPD 195
V E++ CD NG +P + T L G+ S + + N E E GPD
Sbjct: 642 VSEMMKCDINGDTPNVDPLTHAAL--------GDASEVEIDELQNQKEAEEPGPD 688
>gi|209862987 MAP-kinase activating death domain-containing protein
isoform f [Homo sapiens]
Length = 1479
Score = 28.5 bits (62), Expect = 4.4
Identities = 17/55 (30%), Positives = 24/55 (43%), Gaps = 8/55 (14%)
Query: 141 VCEVLSCDHNGGSPRIPFSTFQFLYTYIAKVDGEISASHVSRMLNYMEQEVIGPD 195
V E++ CD NG +P + T L G+ S + + N E E GPD
Sbjct: 642 VSEMMKCDINGDTPNVDPLTHAAL--------GDASEVEIDELQNQKEAEEPGPD 688
>gi|209862983 MAP-kinase activating death domain-containing protein
isoform e [Homo sapiens]
Length = 1608
Score = 28.5 bits (62), Expect = 4.4
Identities = 17/55 (30%), Positives = 24/55 (43%), Gaps = 8/55 (14%)
Query: 141 VCEVLSCDHNGGSPRIPFSTFQFLYTYIAKVDGEISASHVSRMLNYMEQEVIGPD 195
V E++ CD NG +P + T L G+ S + + N E E GPD
Sbjct: 642 VSEMMKCDINGDTPNVDPLTHAAL--------GDASEVEIDELQNQKEAEEPGPD 688
>gi|209862979 MAP-kinase activating death domain-containing protein
isoform c [Homo sapiens]
Length = 1545
Score = 28.5 bits (62), Expect = 4.4
Identities = 17/55 (30%), Positives = 24/55 (43%), Gaps = 8/55 (14%)
Query: 141 VCEVLSCDHNGGSPRIPFSTFQFLYTYIAKVDGEISASHVSRMLNYMEQEVIGPD 195
V E++ CD NG +P + T L G+ S + + N E E GPD
Sbjct: 642 VSEMMKCDINGDTPNVDPLTHAAL--------GDASEVEIDELQNQKEAEEPGPD 688
>gi|209862975 MAP-kinase activating death domain-containing protein
isoform b [Homo sapiens]
Length = 1565
Score = 28.5 bits (62), Expect = 4.4
Identities = 17/55 (30%), Positives = 24/55 (43%), Gaps = 8/55 (14%)
Query: 141 VCEVLSCDHNGGSPRIPFSTFQFLYTYIAKVDGEISASHVSRMLNYMEQEVIGPD 195
V E++ CD NG +P + T L G+ S + + N E E GPD
Sbjct: 642 VSEMMKCDINGDTPNVDPLTHAAL--------GDASEVEIDELQNQKEAEEPGPD 688
>gi|209862971 MAP-kinase activating death domain-containing protein
isoform a [Homo sapiens]
Length = 1588
Score = 28.5 bits (62), Expect = 4.4
Identities = 17/55 (30%), Positives = 24/55 (43%), Gaps = 8/55 (14%)
Query: 141 VCEVLSCDHNGGSPRIPFSTFQFLYTYIAKVDGEISASHVSRMLNYMEQEVIGPD 195
V E++ CD NG +P + T L G+ S + + N E E GPD
Sbjct: 642 VSEMMKCDINGDTPNVDPLTHAAL--------GDASEVEIDELQNQKEAEEPGPD 688
>gi|209571517 MAP-kinase activating death domain-containing protein
isoform h [Homo sapiens]
Length = 1587
Score = 28.5 bits (62), Expect = 4.4
Identities = 17/55 (30%), Positives = 24/55 (43%), Gaps = 8/55 (14%)
Query: 141 VCEVLSCDHNGGSPRIPFSTFQFLYTYIAKVDGEISASHVSRMLNYMEQEVIGPD 195
V E++ CD NG +P + T L G+ S + + N E E GPD
Sbjct: 642 VSEMMKCDINGDTPNVDPLTHAAL--------GDASEVEIDELQNQKEAEEPGPD 688
>gi|114431236 zinc finger protein 462 [Homo sapiens]
Length = 2506
Score = 27.7 bits (60), Expect = 7.5
Identities = 17/58 (29%), Positives = 27/58 (46%), Gaps = 13/58 (22%)
Query: 115 EEIEWLKFLALACSALGVTITKTLKIVCEVLSCDHN----------GGSPRIPFSTFQ 162
+EIEWL F + C L + T +++C + H+ G PR+ ST+Q
Sbjct: 1839 QEIEWLPFRCIKCFKLSFS---TAELLCMHYTDHHSRDLKRDFIILGNGPRLQNSTYQ 1893
>gi|40217847 activating signal cointegrator 1 complex subunit 3-like
1 [Homo sapiens]
Length = 2136
Score = 27.7 bits (60), Expect = 7.5
Identities = 16/49 (32%), Positives = 28/49 (57%)
Query: 13 ELPKMLKEFAKAAIRVQPQDLIQWAADYFEALSRGETPPVRERSERVAL 61
E ++L F +AA+ QP+D++ AAD A+ + E +ER + + L
Sbjct: 111 ETYEVLLSFIQAALGDQPRDILCGAADEVLAVLKNEKLRDKERRKEIDL 159
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.321 0.135 0.403
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 8,244,216
Number of Sequences: 37866
Number of extensions: 325492
Number of successful extensions: 589
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 11
Number of HSP's that attempted gapping in prelim test: 581
Number of HSP's gapped (non-prelim): 18
length of query: 212
length of database: 18,247,518
effective HSP length: 98
effective length of query: 114
effective length of database: 14,536,650
effective search space: 1657178100
effective search space used: 1657178100
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 59 (27.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.