Guide to the Human Genome
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Name: ROPN1 Sequence: fasta or formatted (212aa) NCBI GI: 21359920
Description:

ropporin

Referenced in:

Rho and Rac
Testes and Sperm

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             8.0         17           2
 C cysteine            2.4          5           1
 D aspartate           3.8          8           1
 E glutamate           8.5         18           2
 F phenylalanine       4.2          9           1
 G glycine             4.2          9           2
 H histidine           1.4          3           1
 I isoleucine          7.1         15           2
 K lysine              4.7         10           1
 L leucine            10.4         22           2
 M methionine          2.8          6           1
 N asparagine          3.8          8           1
 P proline             6.1         13           2
 Q glutamine           4.7         10           1
 R arginine            5.7         12           1
 S serine              5.2         11           1
 T threonine           6.1         13           1
 V valine              7.5         16           2
 W tryptophan          1.4          3           1
 Y tyrosine            1.9          4           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   ropporin 
ROPN1B                0.958   ropporin, rhophilin associated protein 1B 
ROPN1L                0.339   ropporin 1-like 
PRKAR2A               0.030   cAMP-dependent protein kinase, regulatory subunit alp...
KIAA1244              0.010   brefeldin A-inhibited guanine nucleotide-exchange p...
PRKAR2B               0.010   cAMP-dependent protein kinase, regulatory subunit be...
MADD                  0.007   MAP-kinase activating death domain-containing prote...
MADD                  0.007   MAP-kinase activating death domain-containing prote...
MADD                  0.007   MAP-kinase activating death domain-containing prote...
MADD                  0.007   MAP-kinase activating death domain-containing protei...
MADD                  0.007   MAP-kinase activating death domain-containing prote...
MADD                  0.007   MAP-kinase activating death domain-containing prote...
MADD                  0.007   MAP-kinase activating death domain-containing prote...
MADD                  0.007   MAP-kinase activating death domain-containing prote...
MADD                  0.007   MAP-kinase activating death domain-containing prote...
MADD                  0.007   MAP-kinase activating death domain-containing prote...
ZNF462                0.007   zinc finger protein 462 
SNRNP200              0.007   activating signal cointegrator 1 complex subunit 3-l...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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