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Search of human proteins with 208973238
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|208973238 tyrosine 3/tryptophan 5 -monooxygenase activation
protein, zeta polypeptide [Homo sapiens]
(245 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|208973244 tyrosine 3/tryptophan 5 -monooxygenase activation p... 479 e-136
gi|208973242 tyrosine 3/tryptophan 5 -monooxygenase activation p... 479 e-136
gi|208973240 tyrosine 3/tryptophan 5 -monooxygenase activation p... 479 e-136
gi|208973238 tyrosine 3/tryptophan 5 -monooxygenase activation p... 479 e-136
gi|21735625 tyrosine 3/tryptophan 5 -monooxygenase activation pr... 479 e-136
gi|4507953 tyrosine 3/tryptophan 5 -monooxygenase activation pro... 479 e-136
gi|4507949 tyrosine 3-monooxygenase/tryptophan 5-monooxygenase a... 421 e-118
gi|21328448 tyrosine 3-monooxygenase/tryptophan 5-monooxygenase ... 421 e-118
gi|5803227 tyrosine 3/tryptophan 5 -monooxygenase activation pro... 398 e-111
gi|4507951 tyrosine 3-monooxygenase/tryptophan 5-monooxygenase a... 355 2e-98
gi|21464101 tyrosine 3-monooxygenase/tryptophan 5-monooxygenase ... 354 4e-98
gi|5454052 stratifin [Homo sapiens] 340 7e-94
gi|5803225 tyrosine 3/tryptophan 5 -monooxygenase activation pro... 324 4e-89
gi|50083293 coiled-coil domain containing 123 [Homo sapiens] 38 0.009
gi|153791497 ciliary rootlet coiled-coil [Homo sapiens] 32 0.39
gi|148596998 coiled-coil domain containing 122 [Homo sapiens] 32 0.66
gi|207452735 epiplakin 1 [Homo sapiens] 31 0.86
gi|32967514 neurofibromin 2 isoform 7 [Homo sapiens] 31 1.1
gi|32967254 neurofibromin 2 isoform 2 [Homo sapiens] 31 1.1
gi|32967266 neurofibromin 2 isoform 2 [Homo sapiens] 31 1.1
gi|32967264 neurofibromin 2 isoform 7 [Homo sapiens] 31 1.1
gi|32967262 neurofibromin 2 isoform 6 [Homo sapiens] 31 1.1
gi|32967260 neurofibromin 2 isoform 5 [Homo sapiens] 31 1.1
gi|32451486 neurofibromin 2 isoform 2 [Homo sapiens] 31 1.1
gi|4557795 neurofibromin 2 isoform 1 [Homo sapiens] 31 1.1
gi|157785668 coiled-coil domain containing 39 [Homo sapiens] 30 1.9
gi|56961680 coiled-coil domain containing 147 [Homo sapiens] 30 1.9
gi|12667788 myosin, heavy polypeptide 9, non-muscle [Homo sapiens] 30 2.5
gi|167614504 laminin, beta 1 precursor [Homo sapiens] 30 2.5
gi|81295809 pericentrin [Homo sapiens] 30 2.5
>gi|208973244 tyrosine 3/tryptophan 5 -monooxygenase activation
protein, zeta polypeptide [Homo sapiens]
Length = 245
Score = 479 bits (1234), Expect = e-136
Identities = 245/245 (100%), Positives = 245/245 (100%)
Query: 1 MDKNELVQKAKLAEQAERYDDMAACMKSVTEQGAELSNEERNLLSVAYKNVVGARRSSWR 60
MDKNELVQKAKLAEQAERYDDMAACMKSVTEQGAELSNEERNLLSVAYKNVVGARRSSWR
Sbjct: 1 MDKNELVQKAKLAEQAERYDDMAACMKSVTEQGAELSNEERNLLSVAYKNVVGARRSSWR 60
Query: 61 VVSSIEQKTEGAEKKQQMAREYREKIETELRDICNDVLSLLEKFLIPNASQAESKVFYLK 120
VVSSIEQKTEGAEKKQQMAREYREKIETELRDICNDVLSLLEKFLIPNASQAESKVFYLK
Sbjct: 61 VVSSIEQKTEGAEKKQQMAREYREKIETELRDICNDVLSLLEKFLIPNASQAESKVFYLK 120
Query: 121 MKGDYYRYLAEVAAGDDKKGIVDQSQQAYQEAFEISKKEMQPTHPIRLGLALNFSVFYYE 180
MKGDYYRYLAEVAAGDDKKGIVDQSQQAYQEAFEISKKEMQPTHPIRLGLALNFSVFYYE
Sbjct: 121 MKGDYYRYLAEVAAGDDKKGIVDQSQQAYQEAFEISKKEMQPTHPIRLGLALNFSVFYYE 180
Query: 181 ILNSPEKACSLAKTAFDEAIAELDTLSEESYKDSTLIMQLLRDNLTLWTSDTQGDEAEAG 240
ILNSPEKACSLAKTAFDEAIAELDTLSEESYKDSTLIMQLLRDNLTLWTSDTQGDEAEAG
Sbjct: 181 ILNSPEKACSLAKTAFDEAIAELDTLSEESYKDSTLIMQLLRDNLTLWTSDTQGDEAEAG 240
Query: 241 EGGEN 245
EGGEN
Sbjct: 241 EGGEN 245
>gi|208973242 tyrosine 3/tryptophan 5 -monooxygenase activation
protein, zeta polypeptide [Homo sapiens]
Length = 245
Score = 479 bits (1234), Expect = e-136
Identities = 245/245 (100%), Positives = 245/245 (100%)
Query: 1 MDKNELVQKAKLAEQAERYDDMAACMKSVTEQGAELSNEERNLLSVAYKNVVGARRSSWR 60
MDKNELVQKAKLAEQAERYDDMAACMKSVTEQGAELSNEERNLLSVAYKNVVGARRSSWR
Sbjct: 1 MDKNELVQKAKLAEQAERYDDMAACMKSVTEQGAELSNEERNLLSVAYKNVVGARRSSWR 60
Query: 61 VVSSIEQKTEGAEKKQQMAREYREKIETELRDICNDVLSLLEKFLIPNASQAESKVFYLK 120
VVSSIEQKTEGAEKKQQMAREYREKIETELRDICNDVLSLLEKFLIPNASQAESKVFYLK
Sbjct: 61 VVSSIEQKTEGAEKKQQMAREYREKIETELRDICNDVLSLLEKFLIPNASQAESKVFYLK 120
Query: 121 MKGDYYRYLAEVAAGDDKKGIVDQSQQAYQEAFEISKKEMQPTHPIRLGLALNFSVFYYE 180
MKGDYYRYLAEVAAGDDKKGIVDQSQQAYQEAFEISKKEMQPTHPIRLGLALNFSVFYYE
Sbjct: 121 MKGDYYRYLAEVAAGDDKKGIVDQSQQAYQEAFEISKKEMQPTHPIRLGLALNFSVFYYE 180
Query: 181 ILNSPEKACSLAKTAFDEAIAELDTLSEESYKDSTLIMQLLRDNLTLWTSDTQGDEAEAG 240
ILNSPEKACSLAKTAFDEAIAELDTLSEESYKDSTLIMQLLRDNLTLWTSDTQGDEAEAG
Sbjct: 181 ILNSPEKACSLAKTAFDEAIAELDTLSEESYKDSTLIMQLLRDNLTLWTSDTQGDEAEAG 240
Query: 241 EGGEN 245
EGGEN
Sbjct: 241 EGGEN 245
>gi|208973240 tyrosine 3/tryptophan 5 -monooxygenase activation
protein, zeta polypeptide [Homo sapiens]
Length = 245
Score = 479 bits (1234), Expect = e-136
Identities = 245/245 (100%), Positives = 245/245 (100%)
Query: 1 MDKNELVQKAKLAEQAERYDDMAACMKSVTEQGAELSNEERNLLSVAYKNVVGARRSSWR 60
MDKNELVQKAKLAEQAERYDDMAACMKSVTEQGAELSNEERNLLSVAYKNVVGARRSSWR
Sbjct: 1 MDKNELVQKAKLAEQAERYDDMAACMKSVTEQGAELSNEERNLLSVAYKNVVGARRSSWR 60
Query: 61 VVSSIEQKTEGAEKKQQMAREYREKIETELRDICNDVLSLLEKFLIPNASQAESKVFYLK 120
VVSSIEQKTEGAEKKQQMAREYREKIETELRDICNDVLSLLEKFLIPNASQAESKVFYLK
Sbjct: 61 VVSSIEQKTEGAEKKQQMAREYREKIETELRDICNDVLSLLEKFLIPNASQAESKVFYLK 120
Query: 121 MKGDYYRYLAEVAAGDDKKGIVDQSQQAYQEAFEISKKEMQPTHPIRLGLALNFSVFYYE 180
MKGDYYRYLAEVAAGDDKKGIVDQSQQAYQEAFEISKKEMQPTHPIRLGLALNFSVFYYE
Sbjct: 121 MKGDYYRYLAEVAAGDDKKGIVDQSQQAYQEAFEISKKEMQPTHPIRLGLALNFSVFYYE 180
Query: 181 ILNSPEKACSLAKTAFDEAIAELDTLSEESYKDSTLIMQLLRDNLTLWTSDTQGDEAEAG 240
ILNSPEKACSLAKTAFDEAIAELDTLSEESYKDSTLIMQLLRDNLTLWTSDTQGDEAEAG
Sbjct: 181 ILNSPEKACSLAKTAFDEAIAELDTLSEESYKDSTLIMQLLRDNLTLWTSDTQGDEAEAG 240
Query: 241 EGGEN 245
EGGEN
Sbjct: 241 EGGEN 245
>gi|208973238 tyrosine 3/tryptophan 5 -monooxygenase activation
protein, zeta polypeptide [Homo sapiens]
Length = 245
Score = 479 bits (1234), Expect = e-136
Identities = 245/245 (100%), Positives = 245/245 (100%)
Query: 1 MDKNELVQKAKLAEQAERYDDMAACMKSVTEQGAELSNEERNLLSVAYKNVVGARRSSWR 60
MDKNELVQKAKLAEQAERYDDMAACMKSVTEQGAELSNEERNLLSVAYKNVVGARRSSWR
Sbjct: 1 MDKNELVQKAKLAEQAERYDDMAACMKSVTEQGAELSNEERNLLSVAYKNVVGARRSSWR 60
Query: 61 VVSSIEQKTEGAEKKQQMAREYREKIETELRDICNDVLSLLEKFLIPNASQAESKVFYLK 120
VVSSIEQKTEGAEKKQQMAREYREKIETELRDICNDVLSLLEKFLIPNASQAESKVFYLK
Sbjct: 61 VVSSIEQKTEGAEKKQQMAREYREKIETELRDICNDVLSLLEKFLIPNASQAESKVFYLK 120
Query: 121 MKGDYYRYLAEVAAGDDKKGIVDQSQQAYQEAFEISKKEMQPTHPIRLGLALNFSVFYYE 180
MKGDYYRYLAEVAAGDDKKGIVDQSQQAYQEAFEISKKEMQPTHPIRLGLALNFSVFYYE
Sbjct: 121 MKGDYYRYLAEVAAGDDKKGIVDQSQQAYQEAFEISKKEMQPTHPIRLGLALNFSVFYYE 180
Query: 181 ILNSPEKACSLAKTAFDEAIAELDTLSEESYKDSTLIMQLLRDNLTLWTSDTQGDEAEAG 240
ILNSPEKACSLAKTAFDEAIAELDTLSEESYKDSTLIMQLLRDNLTLWTSDTQGDEAEAG
Sbjct: 181 ILNSPEKACSLAKTAFDEAIAELDTLSEESYKDSTLIMQLLRDNLTLWTSDTQGDEAEAG 240
Query: 241 EGGEN 245
EGGEN
Sbjct: 241 EGGEN 245
>gi|21735625 tyrosine 3/tryptophan 5 -monooxygenase activation
protein, zeta polypeptide [Homo sapiens]
Length = 245
Score = 479 bits (1234), Expect = e-136
Identities = 245/245 (100%), Positives = 245/245 (100%)
Query: 1 MDKNELVQKAKLAEQAERYDDMAACMKSVTEQGAELSNEERNLLSVAYKNVVGARRSSWR 60
MDKNELVQKAKLAEQAERYDDMAACMKSVTEQGAELSNEERNLLSVAYKNVVGARRSSWR
Sbjct: 1 MDKNELVQKAKLAEQAERYDDMAACMKSVTEQGAELSNEERNLLSVAYKNVVGARRSSWR 60
Query: 61 VVSSIEQKTEGAEKKQQMAREYREKIETELRDICNDVLSLLEKFLIPNASQAESKVFYLK 120
VVSSIEQKTEGAEKKQQMAREYREKIETELRDICNDVLSLLEKFLIPNASQAESKVFYLK
Sbjct: 61 VVSSIEQKTEGAEKKQQMAREYREKIETELRDICNDVLSLLEKFLIPNASQAESKVFYLK 120
Query: 121 MKGDYYRYLAEVAAGDDKKGIVDQSQQAYQEAFEISKKEMQPTHPIRLGLALNFSVFYYE 180
MKGDYYRYLAEVAAGDDKKGIVDQSQQAYQEAFEISKKEMQPTHPIRLGLALNFSVFYYE
Sbjct: 121 MKGDYYRYLAEVAAGDDKKGIVDQSQQAYQEAFEISKKEMQPTHPIRLGLALNFSVFYYE 180
Query: 181 ILNSPEKACSLAKTAFDEAIAELDTLSEESYKDSTLIMQLLRDNLTLWTSDTQGDEAEAG 240
ILNSPEKACSLAKTAFDEAIAELDTLSEESYKDSTLIMQLLRDNLTLWTSDTQGDEAEAG
Sbjct: 181 ILNSPEKACSLAKTAFDEAIAELDTLSEESYKDSTLIMQLLRDNLTLWTSDTQGDEAEAG 240
Query: 241 EGGEN 245
EGGEN
Sbjct: 241 EGGEN 245
>gi|4507953 tyrosine 3/tryptophan 5 -monooxygenase activation
protein, zeta polypeptide [Homo sapiens]
Length = 245
Score = 479 bits (1234), Expect = e-136
Identities = 245/245 (100%), Positives = 245/245 (100%)
Query: 1 MDKNELVQKAKLAEQAERYDDMAACMKSVTEQGAELSNEERNLLSVAYKNVVGARRSSWR 60
MDKNELVQKAKLAEQAERYDDMAACMKSVTEQGAELSNEERNLLSVAYKNVVGARRSSWR
Sbjct: 1 MDKNELVQKAKLAEQAERYDDMAACMKSVTEQGAELSNEERNLLSVAYKNVVGARRSSWR 60
Query: 61 VVSSIEQKTEGAEKKQQMAREYREKIETELRDICNDVLSLLEKFLIPNASQAESKVFYLK 120
VVSSIEQKTEGAEKKQQMAREYREKIETELRDICNDVLSLLEKFLIPNASQAESKVFYLK
Sbjct: 61 VVSSIEQKTEGAEKKQQMAREYREKIETELRDICNDVLSLLEKFLIPNASQAESKVFYLK 120
Query: 121 MKGDYYRYLAEVAAGDDKKGIVDQSQQAYQEAFEISKKEMQPTHPIRLGLALNFSVFYYE 180
MKGDYYRYLAEVAAGDDKKGIVDQSQQAYQEAFEISKKEMQPTHPIRLGLALNFSVFYYE
Sbjct: 121 MKGDYYRYLAEVAAGDDKKGIVDQSQQAYQEAFEISKKEMQPTHPIRLGLALNFSVFYYE 180
Query: 181 ILNSPEKACSLAKTAFDEAIAELDTLSEESYKDSTLIMQLLRDNLTLWTSDTQGDEAEAG 240
ILNSPEKACSLAKTAFDEAIAELDTLSEESYKDSTLIMQLLRDNLTLWTSDTQGDEAEAG
Sbjct: 181 ILNSPEKACSLAKTAFDEAIAELDTLSEESYKDSTLIMQLLRDNLTLWTSDTQGDEAEAG 240
Query: 241 EGGEN 245
EGGEN
Sbjct: 241 EGGEN 245
>gi|4507949 tyrosine 3-monooxygenase/tryptophan 5-monooxygenase
activation protein, beta polypeptide [Homo sapiens]
Length = 246
Score = 421 bits (1083), Expect = e-118
Identities = 212/242 (87%), Positives = 228/242 (94%)
Query: 1 MDKNELVQKAKLAEQAERYDDMAACMKSVTEQGAELSNEERNLLSVAYKNVVGARRSSWR 60
MDK+ELVQKAKLAEQAERYDDMAA MK+VTEQG ELSNEERNLLSVAYKNVVGARRSSWR
Sbjct: 3 MDKSELVQKAKLAEQAERYDDMAAAMKAVTEQGHELSNEERNLLSVAYKNVVGARRSSWR 62
Query: 61 VVSSIEQKTEGAEKKQQMAREYREKIETELRDICNDVLSLLEKFLIPNASQAESKVFYLK 120
V+SSIEQKTE EKKQQM +EYREKIE EL+DICNDVL LL+K+LIPNA+Q ESKVFYLK
Sbjct: 63 VISSIEQKTERNEKKQQMGKEYREKIEAELQDICNDVLELLDKYLIPNATQPESKVFYLK 122
Query: 121 MKGDYYRYLAEVAAGDDKKGIVDQSQQAYQEAFEISKKEMQPTHPIRLGLALNFSVFYYE 180
MKGDY+RYL+EVA+GD+K+ V SQQAYQEAFEISKKEMQPTHPIRLGLALNFSVFYYE
Sbjct: 123 MKGDYFRYLSEVASGDNKQTTVSNSQQAYQEAFEISKKEMQPTHPIRLGLALNFSVFYYE 182
Query: 181 ILNSPEKACSLAKTAFDEAIAELDTLSEESYKDSTLIMQLLRDNLTLWTSDTQGDEAEAG 240
ILNSPEKACSLAKTAFDEAIAELDTL+EESYKDSTLIMQLLRDNLTLWTS+ QGDE +AG
Sbjct: 183 ILNSPEKACSLAKTAFDEAIAELDTLNEESYKDSTLIMQLLRDNLTLWTSENQGDEGDAG 242
Query: 241 EG 242
EG
Sbjct: 243 EG 244
>gi|21328448 tyrosine 3-monooxygenase/tryptophan 5-monooxygenase
activation protein, beta polypeptide [Homo sapiens]
Length = 246
Score = 421 bits (1083), Expect = e-118
Identities = 212/242 (87%), Positives = 228/242 (94%)
Query: 1 MDKNELVQKAKLAEQAERYDDMAACMKSVTEQGAELSNEERNLLSVAYKNVVGARRSSWR 60
MDK+ELVQKAKLAEQAERYDDMAA MK+VTEQG ELSNEERNLLSVAYKNVVGARRSSWR
Sbjct: 3 MDKSELVQKAKLAEQAERYDDMAAAMKAVTEQGHELSNEERNLLSVAYKNVVGARRSSWR 62
Query: 61 VVSSIEQKTEGAEKKQQMAREYREKIETELRDICNDVLSLLEKFLIPNASQAESKVFYLK 120
V+SSIEQKTE EKKQQM +EYREKIE EL+DICNDVL LL+K+LIPNA+Q ESKVFYLK
Sbjct: 63 VISSIEQKTERNEKKQQMGKEYREKIEAELQDICNDVLELLDKYLIPNATQPESKVFYLK 122
Query: 121 MKGDYYRYLAEVAAGDDKKGIVDQSQQAYQEAFEISKKEMQPTHPIRLGLALNFSVFYYE 180
MKGDY+RYL+EVA+GD+K+ V SQQAYQEAFEISKKEMQPTHPIRLGLALNFSVFYYE
Sbjct: 123 MKGDYFRYLSEVASGDNKQTTVSNSQQAYQEAFEISKKEMQPTHPIRLGLALNFSVFYYE 182
Query: 181 ILNSPEKACSLAKTAFDEAIAELDTLSEESYKDSTLIMQLLRDNLTLWTSDTQGDEAEAG 240
ILNSPEKACSLAKTAFDEAIAELDTL+EESYKDSTLIMQLLRDNLTLWTS+ QGDE +AG
Sbjct: 183 ILNSPEKACSLAKTAFDEAIAELDTLNEESYKDSTLIMQLLRDNLTLWTSENQGDEGDAG 242
Query: 241 EG 242
EG
Sbjct: 243 EG 244
>gi|5803227 tyrosine 3/tryptophan 5 -monooxygenase activation
protein, theta polypeptide [Homo sapiens]
Length = 245
Score = 398 bits (1023), Expect = e-111
Identities = 195/245 (79%), Positives = 222/245 (90%)
Query: 1 MDKNELVQKAKLAEQAERYDDMAACMKSVTEQGAELSNEERNLLSVAYKNVVGARRSSWR 60
M+K EL+QKAKLAEQAERYDDMA CMK+VTEQGAELSNEERNLLSVAYKNVVG RRS+WR
Sbjct: 1 MEKTELIQKAKLAEQAERYDDMATCMKAVTEQGAELSNEERNLLSVAYKNVVGGRRSAWR 60
Query: 61 VVSSIEQKTEGAEKKQQMAREYREKIETELRDICNDVLSLLEKFLIPNASQAESKVFYLK 120
V+SSIEQKT+ ++KK Q+ ++YREK+E+ELR IC VL LL+K+LI NA+ ESKVFYLK
Sbjct: 61 VISSIEQKTDTSDKKLQLIKDYREKVESELRSICTTVLELLDKYLIANATNPESKVFYLK 120
Query: 121 MKGDYYRYLAEVAAGDDKKGIVDQSQQAYQEAFEISKKEMQPTHPIRLGLALNFSVFYYE 180
MKGDY+RYLAEVA GDD+K +D SQ AYQEAF+ISKKEMQPTHPIRLGLALNFSVFYYE
Sbjct: 121 MKGDYFRYLAEVACGDDRKQTIDNSQGAYQEAFDISKKEMQPTHPIRLGLALNFSVFYYE 180
Query: 181 ILNSPEKACSLAKTAFDEAIAELDTLSEESYKDSTLIMQLLRDNLTLWTSDTQGDEAEAG 240
ILN+PE AC+LAKTAFDEAIAELDTL+E+SYKDSTLIMQLLRDNLTLWTSD+ G+E +A
Sbjct: 181 ILNNPELACTLAKTAFDEAIAELDTLNEDSYKDSTLIMQLLRDNLTLWTSDSAGEECDAA 240
Query: 241 EGGEN 245
EG EN
Sbjct: 241 EGAEN 245
>gi|4507951 tyrosine 3-monooxygenase/tryptophan 5-monooxygenase
activation protein, eta polypeptide [Homo sapiens]
Length = 246
Score = 355 bits (912), Expect = 2e-98
Identities = 183/245 (74%), Positives = 212/245 (86%), Gaps = 6/245 (2%)
Query: 2 DKNELVQKAKLAEQAERYDDMAACMKSVTEQGAELSNEERNLLSVAYKNVVGARRSSWRV 61
D+ +L+Q+A+LAEQAERYDDMA+ MK+VTE LSNE+RNLLSVAYKNVVGARRSSWRV
Sbjct: 3 DREQLLQRARLAEQAERYDDMASAMKAVTELNEPLSNEDRNLLSVAYKNVVGARRSSWRV 62
Query: 62 VSSIEQKT--EGAEKKQQMAREYREKIETELRDICNDVLSLLEKFLIPNAS--QAESKVF 117
+SSIEQKT +G EKK + + YREKIE EL +CNDVLSLL+KFLI N + Q ESKVF
Sbjct: 63 ISSIEQKTMADGNEKKLEKVKAYREKIEKELETVCNDVLSLLDKFLIKNCNDFQYESKVF 122
Query: 118 YLKMKGDYYRYLAEVAAGDDKKGIVDQSQQAYQEAFEISKKEMQPTHPIRLGLALNFSVF 177
YLKMKGDYYRYLAEVA+G+ K +V+ S+ AY+EAFEISK++MQPTHPIRLGLALNFSVF
Sbjct: 123 YLKMKGDYYRYLAEVASGEKKNSVVEASEAAYKEAFEISKEQMQPTHPIRLGLALNFSVF 182
Query: 178 YYEILNSPEKACSLAKTAFDEAIAELDTLSEESYKDSTLIMQLLRDNLTLWTSDTQGDEA 237
YYEI N+PE+AC LAK AFD+AIAELDTL+E+SYKDSTLIMQLLRDNLTLWTSD Q +
Sbjct: 183 YYEIQNAPEQACLLAKQAFDDAIAELDTLNEDSYKDSTLIMQLLRDNLTLWTSDQQ--DE 240
Query: 238 EAGEG 242
EAGEG
Sbjct: 241 EAGEG 245
>gi|21464101 tyrosine 3-monooxygenase/tryptophan 5-monooxygenase
activation protein, gamma polypeptide [Homo sapiens]
Length = 247
Score = 354 bits (908), Expect = 4e-98
Identities = 184/246 (74%), Positives = 209/246 (84%), Gaps = 6/246 (2%)
Query: 1 MDKNELVQKAKLAEQAERYDDMAACMKSVTEQGAELSNEERNLLSVAYKNVVGARRSSWR 60
+D+ +LVQKA+LAEQAERYDDMAA MK+VTE LSNEERNLLSVAYKNVVGARRSSWR
Sbjct: 2 VDREQLVQKARLAEQAERYDDMAAAMKNVTELNEPLSNEERNLLSVAYKNVVGARRSSWR 61
Query: 61 VVSSIEQKT--EGAEKKQQMAREYREKIETELRDICNDVLSLLEKFLIPNAS--QAESKV 116
V+SSIEQKT +G EKK +M R YREKIE EL +C DVLSLL+ +LI N S Q ESKV
Sbjct: 62 VISSIEQKTSADGNEKKIEMVRAYREKIEKELEAVCQDVLSLLDNYLIKNCSETQYESKV 121
Query: 117 FYLKMKGDYYRYLAEVAAGDDKKGIVDQSQQAYQEAFEISKKEMQPTHPIRLGLALNFSV 176
FYLKMKGDYYRYLAEVA G+ + +V+ S++AY EA EISK+ MQPTHPIRLGLALN+SV
Sbjct: 122 FYLKMKGDYYRYLAEVATGEKRATVVESSEKAYSEAHEISKEHMQPTHPIRLGLALNYSV 181
Query: 177 FYYEILNSPEKACSLAKTAFDEAIAELDTLSEESYKDSTLIMQLLRDNLTLWTSDTQGDE 236
FYYEI N+PE+AC LAKTAFD+AIAELDTL+E+SYKDSTLIMQLLRDNLTLWTSD Q D
Sbjct: 182 FYYEIQNAPEQACHLAKTAFDDAIAELDTLNEDSYKDSTLIMQLLRDNLTLWTSDQQDD- 240
Query: 237 AEAGEG 242
+ GEG
Sbjct: 241 -DGGEG 245
>gi|5454052 stratifin [Homo sapiens]
Length = 248
Score = 340 bits (872), Expect = 7e-94
Identities = 175/246 (71%), Positives = 205/246 (83%), Gaps = 7/246 (2%)
Query: 1 MDKNELVQKAKLAEQAERYDDMAACMKSVTEQGAELSNEERNLLSVAYKNVVGARRSSWR 60
M++ L+QKAKLAEQAERY+DMAA MK E+G ELS EERNLLSVAYKNVVG +R++WR
Sbjct: 1 MERASLIQKAKLAEQAERYEDMAAFMKGAVEKGEELSCEERNLLSVAYKNVVGGQRAAWR 60
Query: 61 VVSSIEQKT--EGAEKKQQMAREYREKIETELRDICNDVLSLLEKFLIPNASQAESKVFY 118
V+SSIEQK+ EG+E+K REYREK+ETEL+ +C+ VL LL+ LI A AES+VFY
Sbjct: 61 VLSSIEQKSNEEGSEEKGPEVREYREKVETELQGVCDTVLGLLDSHLIKEAGDAESRVFY 120
Query: 119 LKMKGDYYRYLAEVAAGDDKKGIVDQSQQAYQEAFEISKKEMQPTHPIRLGLALNFSVFY 178
LKMKGDYYRYLAEVA GDDKK I+D ++ AYQEA +ISKKEM PT+PIRLGLALNFSVF+
Sbjct: 121 LKMKGDYYRYLAEVATGDDKKRIIDSARSAYQEAMDISKKEMPPTNPIRLGLALNFSVFH 180
Query: 179 YEILNSPEKACSLAKTAFDEAIAELDTLSEESYKDSTLIMQLLRDNLTLWTSDTQGDEAE 238
YEI NSPE+A SLAKT FDEA+A+L TLSE+SYKDSTLIMQLLRDNLTLWT+D G+
Sbjct: 181 YEIANSPEEAISLAKTTFDEAMADLHTLSEDSYKDSTLIMQLLRDNLTLWTADNAGE--- 237
Query: 239 AGEGGE 244
EGGE
Sbjct: 238 --EGGE 241
>gi|5803225 tyrosine 3/tryptophan 5 -monooxygenase activation
protein, epsilon polypeptide [Homo sapiens]
Length = 255
Score = 324 bits (831), Expect = 4e-89
Identities = 165/239 (69%), Positives = 193/239 (80%), Gaps = 2/239 (0%)
Query: 2 DKNELVQKAKLAEQAERYDDMAACMKSVTEQGAELSNEERNLLSVAYKNVVGARRSSWRV 61
D+ +LV +AKLAEQAERYD+M MK V EL+ EERNLLSVAYKNV+GARR+SWR+
Sbjct: 3 DREDLVYQAKLAEQAERYDEMVESMKKVAGMDVELTVEERNLLSVAYKNVIGARRASWRI 62
Query: 62 VSSIEQKTE--GAEKKQQMAREYREKIETELRDICNDVLSLLEKFLIPNASQAESKVFYL 119
+SSIEQK E G E K +M REYR+ +ETEL+ IC D+L +L+K LIP A+ ESKVFY
Sbjct: 63 ISSIEQKEENKGGEDKLKMIREYRQMVETELKLICCDILDVLDKHLIPAANTGESKVFYY 122
Query: 120 KMKGDYYRYLAEVAAGDDKKGIVDQSQQAYQEAFEISKKEMQPTHPIRLGLALNFSVFYY 179
KMKGDY+RYLAE A G+D+K + S AY+ A +I+ E+ PTHPIRLGLALNFSVFYY
Sbjct: 123 KMKGDYHRYLAEFATGNDRKEAAENSLVAYKAASDIAMTELPPTHPIRLGLALNFSVFYY 182
Query: 180 EILNSPEKACSLAKTAFDEAIAELDTLSEESYKDSTLIMQLLRDNLTLWTSDTQGDEAE 238
EILNSP++AC LAK AFD+AIAELDTLSEESYKDSTLIMQLLRDNLTLWTSD QGD E
Sbjct: 183 EILNSPDRACRLAKAAFDDAIAELDTLSEESYKDSTLIMQLLRDNLTLWTSDMQGDGEE 241
>gi|50083293 coiled-coil domain containing 123 [Homo sapiens]
Length = 783
Score = 37.7 bits (86), Expect = 0.009
Identities = 47/235 (20%), Positives = 95/235 (40%), Gaps = 26/235 (11%)
Query: 1 MDKNELVQKAKLAEQAERYDDMAACMKSVTEQGAELSNEERNLLSVAYKNVVGARRSSWR 60
+ K E ++A++ E E+ + A KS+ + L+ E+ L + R S +
Sbjct: 524 LQKEEEKERAEMEELMEKLTVLQAQKKSLLLEKNSLT-EQNKALEAELERAQKINRKSQK 582
Query: 61 VVSSIEQKTEGAEKKQQMAREYREKIETELRDICN--DVLSLLEKFLIPNASQAESKVFY 118
+ ++++ E A + A +Y + +I D L L K L +KV
Sbjct: 583 KIEVLKKQVEKAMGNEMSAHQYLANLVGLAENITQERDSLMCLAKCLESEKDGVLNKVIK 642
Query: 119 -------LKMKGDYYRYLAEVAAGDDKKGIVDQSQQAYQEAFEISKKEMQPTHPIRLGLA 171
L+ K Y+ A + GD +++Q + + + ++EM+ H
Sbjct: 643 SNIRLGKLEEKVKGYKKQAALKLGDISHRLLEQQEDFAGKTAQY-RQEMRHLH------- 694
Query: 172 LNFSVFYYEILNSPEKACSLAKTAFDEAIAELDTLSEESYKDSTLIMQLLRDNLT 226
++L ++ A E EL+ + E +++++ I +LL+D LT
Sbjct: 695 --------QVLKDKQEVLDQALQQNREMEGELEVIWESTFRENRRIRELLQDTLT 741
>gi|153791497 ciliary rootlet coiled-coil [Homo sapiens]
Length = 2017
Score = 32.3 bits (72), Expect = 0.39
Identities = 22/92 (23%), Positives = 43/92 (46%), Gaps = 5/92 (5%)
Query: 2 DKNELVQKAKLAEQAERYDDMAACMKSVTEQGAELSNEERNLLSVAYKNVVGARRSSWRV 61
+K EL ++ +Q D+ +S +Q L E+ LS + ++G R S +
Sbjct: 1034 EKEELSEEIAALQQER--DEGLLLAESEKQQALSLKESEKTALS---EKLMGTRHSLATI 1088
Query: 62 VSSIEQKTEGAEKKQQMAREYREKIETELRDI 93
+E++ A+ +Q+ R + +ELRD+
Sbjct: 1089 SLEMERQKRDAQSRQEQDRSTVNALTSELRDL 1120
>gi|148596998 coiled-coil domain containing 122 [Homo sapiens]
Length = 273
Score = 31.6 bits (70), Expect = 0.66
Identities = 18/90 (20%), Positives = 40/90 (44%), Gaps = 4/90 (4%)
Query: 47 AYKNVVGARRSSWRVVSSIEQKTEGAEKKQQMAREYREKIE----TELRDICNDVLSLLE 102
A+KN +G S W ++ + +K + +K + M E + ++ + + D+ +L +
Sbjct: 134 AHKNSLGEVESKWSFMTELHEKRDFVKKLKTMKEELMQDLQNPGGNRITQVQEDITNLKD 193
Query: 103 KFLIPNASQAESKVFYLKMKGDYYRYLAEV 132
K + S E F + K + + E+
Sbjct: 194 KIITVKESIIEKTCFLEEEKKTHEKLRKEI 223
>gi|207452735 epiplakin 1 [Homo sapiens]
Length = 5090
Score = 31.2 bits (69), Expect = 0.86
Identities = 17/43 (39%), Positives = 28/43 (65%), Gaps = 3/43 (6%)
Query: 43 LLSVAYKNVVGARRSSWRVVSSIEQKTEGAEKKQQMAREYREK 85
LLSV Y G R S+W +++S E +EG +++Q+ R YR++
Sbjct: 818 LLSVKYGRFQGQRVSAWELINS-EYFSEG--RRRQLLRRYRQR 857
Score = 29.6 bits (65), Expect = 2.5
Identities = 27/107 (25%), Positives = 46/107 (42%), Gaps = 11/107 (10%)
Query: 5 ELVQKAKLAEQAERYDDMAACMKSVTEQGAE---LSNEERNLLSVAYKNVV-----GARR 56
E V +L E+ +D + V + + + +E R L + G +
Sbjct: 2061 EKVSYRELQERCRPQEDTGWVLFPVNKAARDSEHIDDETRRALEAEQVEITVGRFRGQKP 2120
Query: 57 SSWRVVSSIEQKTEGAEKKQQMAREYREKIETELRDICNDVLSLLEK 103
+ W +++S E TE EKK Q+ R YR L+ + +L L+EK
Sbjct: 2121 TLWALLNS-EYVTE--EKKLQLVRMYRTHTRRALQTVAQLILELIEK 2164
>gi|32967514 neurofibromin 2 isoform 7 [Homo sapiens]
Length = 507
Score = 30.8 bits (68), Expect = 1.1
Identities = 36/173 (20%), Positives = 68/173 (39%), Gaps = 32/173 (18%)
Query: 1 MDKNELVQKAKLAEQAERYDDMAACMKSVTEQGAELSNEERNLLSVAYKNVVGARRSSWR 60
M++ L ++ ++ E+AER D ++ A ++NE A S
Sbjct: 251 MERQRLAREKQMREEAERTRDELERRLLQMKEEATMANE--------------ALMRSEE 296
Query: 61 VVSSIEQKTEGAEKKQQMAREYREKIETELRDICNDVLSLLEKFLIPNASQAESKVFYLK 120
+ +K + E++ ++ + + E E++ I + E+ + E++V LK
Sbjct: 297 TADLLAEKAQITEEEAKLLAQKAAEAEQEMQRIKATAIRTEEEKRLMEQKVLEAEVLALK 356
Query: 121 MKGDYYRYLAEVAAGDDKKGIVDQSQQAYQEAFEISKKEMQ--------PTHP 165
M + R E DQ +Q QEA E ++ Q PT+P
Sbjct: 357 MAEESERRAKE----------ADQLKQDLQEAREAERRAKQKLLEIATKPTYP 399
>gi|32967254 neurofibromin 2 isoform 2 [Homo sapiens]
Length = 590
Score = 30.8 bits (68), Expect = 1.1
Identities = 36/173 (20%), Positives = 68/173 (39%), Gaps = 32/173 (18%)
Query: 1 MDKNELVQKAKLAEQAERYDDMAACMKSVTEQGAELSNEERNLLSVAYKNVVGARRSSWR 60
M++ L ++ ++ E+AER D ++ A ++NE A S
Sbjct: 334 MERQRLAREKQMREEAERTRDELERRLLQMKEEATMANE--------------ALMRSEE 379
Query: 61 VVSSIEQKTEGAEKKQQMAREYREKIETELRDICNDVLSLLEKFLIPNASQAESKVFYLK 120
+ +K + E++ ++ + + E E++ I + E+ + E++V LK
Sbjct: 380 TADLLAEKAQITEEEAKLLAQKAAEAEQEMQRIKATAIRTEEEKRLMEQKVLEAEVLALK 439
Query: 121 MKGDYYRYLAEVAAGDDKKGIVDQSQQAYQEAFEISKKEMQ--------PTHP 165
M + R E DQ +Q QEA E ++ Q PT+P
Sbjct: 440 MAEESERRAKE----------ADQLKQDLQEAREAERRAKQKLLEIATKPTYP 482
>gi|32967266 neurofibromin 2 isoform 2 [Homo sapiens]
Length = 590
Score = 30.8 bits (68), Expect = 1.1
Identities = 36/173 (20%), Positives = 68/173 (39%), Gaps = 32/173 (18%)
Query: 1 MDKNELVQKAKLAEQAERYDDMAACMKSVTEQGAELSNEERNLLSVAYKNVVGARRSSWR 60
M++ L ++ ++ E+AER D ++ A ++NE A S
Sbjct: 334 MERQRLAREKQMREEAERTRDELERRLLQMKEEATMANE--------------ALMRSEE 379
Query: 61 VVSSIEQKTEGAEKKQQMAREYREKIETELRDICNDVLSLLEKFLIPNASQAESKVFYLK 120
+ +K + E++ ++ + + E E++ I + E+ + E++V LK
Sbjct: 380 TADLLAEKAQITEEEAKLLAQKAAEAEQEMQRIKATAIRTEEEKRLMEQKVLEAEVLALK 439
Query: 121 MKGDYYRYLAEVAAGDDKKGIVDQSQQAYQEAFEISKKEMQ--------PTHP 165
M + R E DQ +Q QEA E ++ Q PT+P
Sbjct: 440 MAEESERRAKE----------ADQLKQDLQEAREAERRAKQKLLEIATKPTYP 482
>gi|32967264 neurofibromin 2 isoform 7 [Homo sapiens]
Length = 507
Score = 30.8 bits (68), Expect = 1.1
Identities = 36/173 (20%), Positives = 68/173 (39%), Gaps = 32/173 (18%)
Query: 1 MDKNELVQKAKLAEQAERYDDMAACMKSVTEQGAELSNEERNLLSVAYKNVVGARRSSWR 60
M++ L ++ ++ E+AER D ++ A ++NE A S
Sbjct: 251 MERQRLAREKQMREEAERTRDELERRLLQMKEEATMANE--------------ALMRSEE 296
Query: 61 VVSSIEQKTEGAEKKQQMAREYREKIETELRDICNDVLSLLEKFLIPNASQAESKVFYLK 120
+ +K + E++ ++ + + E E++ I + E+ + E++V LK
Sbjct: 297 TADLLAEKAQITEEEAKLLAQKAAEAEQEMQRIKATAIRTEEEKRLMEQKVLEAEVLALK 356
Query: 121 MKGDYYRYLAEVAAGDDKKGIVDQSQQAYQEAFEISKKEMQ--------PTHP 165
M + R E DQ +Q QEA E ++ Q PT+P
Sbjct: 357 MAEESERRAKE----------ADQLKQDLQEAREAERRAKQKLLEIATKPTYP 399
>gi|32967262 neurofibromin 2 isoform 6 [Homo sapiens]
Length = 549
Score = 30.8 bits (68), Expect = 1.1
Identities = 36/173 (20%), Positives = 68/173 (39%), Gaps = 32/173 (18%)
Query: 1 MDKNELVQKAKLAEQAERYDDMAACMKSVTEQGAELSNEERNLLSVAYKNVVGARRSSWR 60
M++ L ++ ++ E+AER D ++ A ++NE A S
Sbjct: 293 MERQRLAREKQMREEAERTRDELERRLLQMKEEATMANE--------------ALMRSEE 338
Query: 61 VVSSIEQKTEGAEKKQQMAREYREKIETELRDICNDVLSLLEKFLIPNASQAESKVFYLK 120
+ +K + E++ ++ + + E E++ I + E+ + E++V LK
Sbjct: 339 TADLLAEKAQITEEEAKLLAQKAAEAEQEMQRIKATAIRTEEEKRLMEQKVLEAEVLALK 398
Query: 121 MKGDYYRYLAEVAAGDDKKGIVDQSQQAYQEAFEISKKEMQ--------PTHP 165
M + R E DQ +Q QEA E ++ Q PT+P
Sbjct: 399 MAEESERRAKE----------ADQLKQDLQEAREAERRAKQKLLEIATKPTYP 441
>gi|32967260 neurofibromin 2 isoform 5 [Homo sapiens]
Length = 548
Score = 30.8 bits (68), Expect = 1.1
Identities = 36/173 (20%), Positives = 68/173 (39%), Gaps = 32/173 (18%)
Query: 1 MDKNELVQKAKLAEQAERYDDMAACMKSVTEQGAELSNEERNLLSVAYKNVVGARRSSWR 60
M++ L ++ ++ E+AER D ++ A ++NE A S
Sbjct: 292 MERQRLAREKQMREEAERTRDELERRLLQMKEEATMANE--------------ALMRSEE 337
Query: 61 VVSSIEQKTEGAEKKQQMAREYREKIETELRDICNDVLSLLEKFLIPNASQAESKVFYLK 120
+ +K + E++ ++ + + E E++ I + E+ + E++V LK
Sbjct: 338 TADLLAEKAQITEEEAKLLAQKAAEAEQEMQRIKATAIRTEEEKRLMEQKVLEAEVLALK 397
Query: 121 MKGDYYRYLAEVAAGDDKKGIVDQSQQAYQEAFEISKKEMQ--------PTHP 165
M + R E DQ +Q QEA E ++ Q PT+P
Sbjct: 398 MAEESERRAKE----------ADQLKQDLQEAREAERRAKQKLLEIATKPTYP 440
>gi|32451486 neurofibromin 2 isoform 2 [Homo sapiens]
Length = 590
Score = 30.8 bits (68), Expect = 1.1
Identities = 36/173 (20%), Positives = 68/173 (39%), Gaps = 32/173 (18%)
Query: 1 MDKNELVQKAKLAEQAERYDDMAACMKSVTEQGAELSNEERNLLSVAYKNVVGARRSSWR 60
M++ L ++ ++ E+AER D ++ A ++NE A S
Sbjct: 334 MERQRLAREKQMREEAERTRDELERRLLQMKEEATMANE--------------ALMRSEE 379
Query: 61 VVSSIEQKTEGAEKKQQMAREYREKIETELRDICNDVLSLLEKFLIPNASQAESKVFYLK 120
+ +K + E++ ++ + + E E++ I + E+ + E++V LK
Sbjct: 380 TADLLAEKAQITEEEAKLLAQKAAEAEQEMQRIKATAIRTEEEKRLMEQKVLEAEVLALK 439
Query: 121 MKGDYYRYLAEVAAGDDKKGIVDQSQQAYQEAFEISKKEMQ--------PTHP 165
M + R E DQ +Q QEA E ++ Q PT+P
Sbjct: 440 MAEESERRAKE----------ADQLKQDLQEAREAERRAKQKLLEIATKPTYP 482
>gi|4557795 neurofibromin 2 isoform 1 [Homo sapiens]
Length = 595
Score = 30.8 bits (68), Expect = 1.1
Identities = 36/173 (20%), Positives = 68/173 (39%), Gaps = 32/173 (18%)
Query: 1 MDKNELVQKAKLAEQAERYDDMAACMKSVTEQGAELSNEERNLLSVAYKNVVGARRSSWR 60
M++ L ++ ++ E+AER D ++ A ++NE A S
Sbjct: 334 MERQRLAREKQMREEAERTRDELERRLLQMKEEATMANE--------------ALMRSEE 379
Query: 61 VVSSIEQKTEGAEKKQQMAREYREKIETELRDICNDVLSLLEKFLIPNASQAESKVFYLK 120
+ +K + E++ ++ + + E E++ I + E+ + E++V LK
Sbjct: 380 TADLLAEKAQITEEEAKLLAQKAAEAEQEMQRIKATAIRTEEEKRLMEQKVLEAEVLALK 439
Query: 121 MKGDYYRYLAEVAAGDDKKGIVDQSQQAYQEAFEISKKEMQ--------PTHP 165
M + R E DQ +Q QEA E ++ Q PT+P
Sbjct: 440 MAEESERRAKE----------ADQLKQDLQEAREAERRAKQKLLEIATKPTYP 482
>gi|157785668 coiled-coil domain containing 39 [Homo sapiens]
Length = 941
Score = 30.0 bits (66), Expect = 1.9
Identities = 23/87 (26%), Positives = 45/87 (51%), Gaps = 6/87 (6%)
Query: 39 EER-NLLSVAYKNVVGARRSSWRVVSSIEQKTEGAEKKQQMAREYREKIETELRDICNDV 97
EER N ++ +KNV + + + E++TE E + +A+ +++ E++ + N++
Sbjct: 49 EERINSMTSHFKNVKQELSITQSLCKARERETESEEHFKAIAQRELGRVKDEIQRLENEM 108
Query: 98 LSLLEKFLIPNASQAESKVFYLKMKGD 124
S+LEK S E+ +F K D
Sbjct: 109 ASILEK-----KSDKENGIFKATQKLD 130
>gi|56961680 coiled-coil domain containing 147 [Homo sapiens]
Length = 872
Score = 30.0 bits (66), Expect = 1.9
Identities = 45/201 (22%), Positives = 86/201 (42%), Gaps = 34/201 (16%)
Query: 3 KNELVQKAKLAEQAERYD--------DMAACMKSVTEQGAELSNEE---RNLLSVAYKNV 51
K E+V KL EQ D+ + VT++ +L +E R L+ +
Sbjct: 124 KEEIVNLTKLVEQGSGLSMDQHSNIRDLLRFKEEVTKERDQLLSEVVKLRESLAQTTEQQ 183
Query: 52 VGARRSSWRVVSSIEQKTEGAEKKQQMA-REYR--EKIETELRDICNDV------LSLLE 102
RS +I Q + +++Q A RE+R EK+E EL+ I D+ + L+
Sbjct: 184 QETERSKEEAEHAISQFQQEIQQRQNEASREFRKKEKLEKELKQIQADMDSRQTEIKALQ 243
Query: 103 KFLIPNASQAESKVFYLKMK-----------GDYYRYLAEVAAGDDKKGIVDQ--SQQAY 149
+++ + + + LK + + A++ +++ +V + SQ+
Sbjct: 244 QYVQKSKEELQKLEQQLKEQKILNERAAKELEQFQMRNAKLQQENEQHSLVCEQLSQENQ 303
Query: 150 QEAFEISKKEMQPTHPIRLGL 170
Q+A E+ KE + H +RL +
Sbjct: 304 QKALELKAKE-EEVHQMRLDI 323
>gi|12667788 myosin, heavy polypeptide 9, non-muscle [Homo sapiens]
Length = 1960
Score = 29.6 bits (65), Expect = 2.5
Identities = 29/125 (23%), Positives = 53/125 (42%), Gaps = 18/125 (14%)
Query: 8 QKAKLAEQAERYDDMAACMKSVTEQGAELSNEERNLLSVAYKNVVGARRSSWRVVSSIEQ 67
Q KLA++ + +D A E L+ EE S+A + +++ +E+
Sbjct: 986 QNCKLAKEKKLLEDRIA------EFTTNLTEEEEKSKSLAK-----LKNKHEAMITDLEE 1034
Query: 68 KTEGAEKKQQMAREYREKIETELRDICNDVLSLLEKFLIPNASQAESKVFYLKMKGDYYR 127
+ EK++Q + R K+E + D+ + + L A AE K+ K + +
Sbjct: 1035 RLRREEKQRQELEKTRRKLEGDSTDLSDQIAEL-------QAQIAELKMQLAKKEEELQA 1087
Query: 128 YLAEV 132
LA V
Sbjct: 1088 ALARV 1092
>gi|167614504 laminin, beta 1 precursor [Homo sapiens]
Length = 1786
Score = 29.6 bits (65), Expect = 2.5
Identities = 20/93 (21%), Positives = 44/93 (47%), Gaps = 1/93 (1%)
Query: 5 ELVQKAKLAEQAERYDDMAACMKSVTEQGAELSNEERNLLSVAYKNVVGARRSSWRVVSS 64
E V+K E E+Y + + TE+ A+ + L + A K ++ S +++
Sbjct: 1684 EDVKKTLDGELDEKYKKVENLIAKKTEESADARRKAEMLQNEA-KTLLAQANSKLQLLKD 1742
Query: 65 IEQKTEGAEKKQQMAREYREKIETELRDICNDV 97
+E+K E ++ + + ++E E+R + D+
Sbjct: 1743 LERKYEDNQRYLEDKAQELARLEGEVRSLLKDI 1775
>gi|81295809 pericentrin [Homo sapiens]
Length = 3336
Score = 29.6 bits (65), Expect = 2.5
Identities = 24/86 (27%), Positives = 39/86 (45%), Gaps = 4/86 (4%)
Query: 11 KLAEQAERYDDMAACMKSVTEQGA-ELSNEERNLLSVAYKNVVGARRSSWRVVSSIEQKT 69
KL + DD+ ++ E EL+N ++ + K + + W+V+ E +
Sbjct: 705 KLQHETRLKDDLEKVKHNLIEDHQKELNNAKQK--TELMKQEFQRKETDWKVMKE-ELQR 761
Query: 70 EGAEKKQQMAREYREKIETELRDICN 95
E EK M E REK E+E + I N
Sbjct: 762 EAEEKLTLMLLELREKAESEKQTIIN 787
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.311 0.127 0.342
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 7,962,960
Number of Sequences: 37866
Number of extensions: 306777
Number of successful extensions: 1129
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 53
Number of HSP's that attempted gapping in prelim test: 1097
Number of HSP's gapped (non-prelim): 88
length of query: 245
length of database: 18,247,518
effective HSP length: 100
effective length of query: 145
effective length of database: 14,460,918
effective search space: 2096833110
effective search space used: 2096833110
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 60 (27.7 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.