Search of human proteins with 20270186

Search of human proteins with 20270186

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|20270186 high mobility group nucleosomal binding domain 3
isoform HMGN3a [Homo sapiens]
         (99 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|20270186 high mobility group nucleosomal binding domain 3 iso...   200   2e-52
gi|23238231 high mobility group nucleosomal binding domain 3 iso...   154   2e-38
gi|5031749 high-mobility group nucleosomal binding domain 2 [Hom...   100   4e-22
gi|169165669 PREDICTED: similar to high-mobility group nucleosom...    97   3e-21
gi|113415254 PREDICTED: similar to high-mobility group nucleosom...    97   3e-21
gi|113414676 PREDICTED: similar to high-mobility group nucleosom...    97   3e-21
gi|239755359 PREDICTED: similar to hCG2040565 [Homo sapiens]           94   3e-20
gi|169165461 PREDICTED: hypothetical protein [Homo sapiens]            94   3e-20
gi|239749851 PREDICTED: similar to hCG2040565 [Homo sapiens]           94   3e-20
gi|169165899 PREDICTED: hypothetical protein [Homo sapiens]            94   3e-20
gi|239744152 PREDICTED: hypothetical protein XP_002343066 [Homo ...    94   3e-20
gi|169165087 PREDICTED: hypothetical protein [Homo sapiens]            94   3e-20
gi|10835240 high mobility group nucleosomal binding domain 4 [Ho...    89   6e-19
gi|169163639 PREDICTED: hypothetical protein [Homo sapiens]            87   3e-18
gi|169162318 PREDICTED: similar to hCG2040565 [Homo sapiens]           87   3e-18
gi|88954992 PREDICTED: hypothetical protein [Homo sapiens]             87   3e-18
gi|169161838 PREDICTED: similar to hCG2040565 [Homo sapiens]           87   3e-18
gi|88953166 PREDICTED: hypothetical protein [Homo sapiens]             87   3e-18
gi|169162671 PREDICTED: similar to hCG2040565 [Homo sapiens]           87   3e-18
gi|169209024 PREDICTED: similar to high-mobility group nucleosom...    84   2e-17
gi|113425750 PREDICTED: similar to high-mobility group nucleosom...    84   2e-17
gi|113425298 PREDICTED: similar to high-mobility group nucleosom...    84   2e-17
gi|239753184 PREDICTED: similar to hCG2040565 [Homo sapiens]           84   2e-17
gi|239747758 PREDICTED: hypothetical protein XP_002348261 [Homo ...    84   2e-17
gi|239741624 PREDICTED: hypothetical protein XP_002342251 [Homo ...    84   2e-17
gi|169202834 PREDICTED: hypothetical protein [Homo sapiens]            84   3e-17
gi|89034591 PREDICTED: hypothetical protein [Homo sapiens]             84   3e-17
gi|89033815 PREDICTED: hypothetical protein [Homo sapiens]             84   3e-17
gi|169208981 PREDICTED: hypothetical protein [Homo sapiens]            70   5e-13
gi|89039047 PREDICTED: hypothetical protein [Homo sapiens]             70   5e-13

>gi|20270186 high mobility group nucleosomal binding domain 3
          isoform HMGN3a [Homo sapiens]
          Length = 99

 Score =  200 bits (509), Expect = 2e-52
 Identities = 99/99 (100%), Positives = 99/99 (100%)

Query: 1  MPKRKSPENTEGKDGSKVTKQEPTRRSARLSAKPAPPKPEPKPRKTSAKKEPGAKISRGA 60
          MPKRKSPENTEGKDGSKVTKQEPTRRSARLSAKPAPPKPEPKPRKTSAKKEPGAKISRGA
Sbjct: 1  MPKRKSPENTEGKDGSKVTKQEPTRRSARLSAKPAPPKPEPKPRKTSAKKEPGAKISRGA 60

Query: 61 KGKKEEKQEAGKEGTAPSENGETKAEEAQKTESVDNEGE 99
          KGKKEEKQEAGKEGTAPSENGETKAEEAQKTESVDNEGE
Sbjct: 61 KGKKEEKQEAGKEGTAPSENGETKAEEAQKTESVDNEGE 99


>gi|23238231 high mobility group nucleosomal binding domain 3
          isoform HMGN3b [Homo sapiens]
          Length = 77

 Score =  154 bits (388), Expect = 2e-38
 Identities = 75/75 (100%), Positives = 75/75 (100%)

Query: 1  MPKRKSPENTEGKDGSKVTKQEPTRRSARLSAKPAPPKPEPKPRKTSAKKEPGAKISRGA 60
          MPKRKSPENTEGKDGSKVTKQEPTRRSARLSAKPAPPKPEPKPRKTSAKKEPGAKISRGA
Sbjct: 1  MPKRKSPENTEGKDGSKVTKQEPTRRSARLSAKPAPPKPEPKPRKTSAKKEPGAKISRGA 60

Query: 61 KGKKEEKQEAGKEGT 75
          KGKKEEKQEAGKEGT
Sbjct: 61 KGKKEEKQEAGKEGT 75


>gi|5031749 high-mobility group nucleosomal binding domain 2 [Homo
          sapiens]
          Length = 90

 Score = 99.8 bits (247), Expect = 4e-22
 Identities = 55/92 (59%), Positives = 67/92 (72%), Gaps = 8/92 (8%)

Query: 1  MPKRKSPENTEGKDGSKVTKQEPTRRSARLSAKPAPPKPEPKPRKTSAKKEPGAKISRGA 60
          MPKRK+  + +G D +KV K EP RRSARLSAKPAPPKPEPKP+K  AKK  G K+ +G 
Sbjct: 1  MPKRKAEGDAKG-DKAKV-KDEPQRRSARLSAKPAPPKPEPKPKKAPAKK--GEKVPKGK 56

Query: 61 KGKKEEKQEAGKEGTAPSENGETKAEEAQKTE 92
          KG    K +AGKEG  P+ENG+ K ++AQK E
Sbjct: 57 KG----KADAGKEGNNPAENGDAKTDQAQKAE 84


>gi|169165669 PREDICTED: similar to high-mobility group
          nucleosomal binding domain 2 [Homo sapiens]
          Length = 90

 Score = 97.1 bits (240), Expect = 3e-21
 Identities = 54/93 (58%), Positives = 67/93 (72%), Gaps = 8/93 (8%)

Query: 1  MPKRKSPENTEGKDGSKVTKQEPTRRSARLSAKPAPPKPEPKPRKTSAKKEPGAKISRGA 60
          MPKRK+  +T+ +D +KV K EP RRS RLSAKPAPPKPEPKP+K  AKK  G K+ +G 
Sbjct: 1  MPKRKAEGDTK-RDKAKV-KDEPQRRSVRLSAKPAPPKPEPKPKKAPAKK--GEKVPKGK 56

Query: 61 KGKKEEKQEAGKEGTAPSENGETKAEEAQKTES 93
          KG    K +AG+EG  P+ENG  K ++AQK ES
Sbjct: 57 KG----KADAGEEGNNPAENGVAKTDQAQKAES 85


>gi|113415254 PREDICTED: similar to high-mobility group
          nucleosomal binding domain 2 [Homo sapiens]
          Length = 90

 Score = 97.1 bits (240), Expect = 3e-21
 Identities = 54/93 (58%), Positives = 67/93 (72%), Gaps = 8/93 (8%)

Query: 1  MPKRKSPENTEGKDGSKVTKQEPTRRSARLSAKPAPPKPEPKPRKTSAKKEPGAKISRGA 60
          MPKRK+  +T+ +D +KV K EP RRS RLSAKPAPPKPEPKP+K  AKK  G K+ +G 
Sbjct: 1  MPKRKAEGDTK-RDKAKV-KDEPQRRSVRLSAKPAPPKPEPKPKKAPAKK--GEKVPKGK 56

Query: 61 KGKKEEKQEAGKEGTAPSENGETKAEEAQKTES 93
          KG    K +AG+EG  P+ENG  K ++AQK ES
Sbjct: 57 KG----KADAGEEGNNPAENGVAKTDQAQKAES 85


>gi|113414676 PREDICTED: similar to high-mobility group
          nucleosomal binding domain 2 [Homo sapiens]
          Length = 90

 Score = 97.1 bits (240), Expect = 3e-21
 Identities = 54/93 (58%), Positives = 67/93 (72%), Gaps = 8/93 (8%)

Query: 1  MPKRKSPENTEGKDGSKVTKQEPTRRSARLSAKPAPPKPEPKPRKTSAKKEPGAKISRGA 60
          MPKRK+  +T+ +D +KV K EP RRS RLSAKPAPPKPEPKP+K  AKK  G K+ +G 
Sbjct: 1  MPKRKAEGDTK-RDKAKV-KDEPQRRSVRLSAKPAPPKPEPKPKKAPAKK--GEKVPKGK 56

Query: 61 KGKKEEKQEAGKEGTAPSENGETKAEEAQKTES 93
          KG    K +AG+EG  P+ENG  K ++AQK ES
Sbjct: 57 KG----KADAGEEGNNPAENGVAKTDQAQKAES 85


>gi|239755359 PREDICTED: similar to hCG2040565 [Homo sapiens]
          Length = 130

 Score = 93.6 bits (231), Expect = 3e-20
 Identities = 51/92 (55%), Positives = 66/92 (71%), Gaps = 6/92 (6%)

Query: 1   MPKRKSPENTEGKDGSKVTKQEPTRRSARLSAKPAPPKPEPKPRKTSAKKEPGAKISRGA 60
           +PKRK+  + +G D +KV K +P RRS RLSAKPAPPKPEPKP+   AKK  G K+ +G 
Sbjct: 39  VPKRKAEGDAKG-DKAKV-KDKPQRRSMRLSAKPAPPKPEPKPKNAPAKK--GEKVPKGK 94

Query: 61  KGKKEEKQEAGKEGTAPSENGETKAEEAQKTE 92
           KG +  + +AGKEG  P+ENG+ K +EAQK E
Sbjct: 95  KGAR--RADAGKEGNNPAENGDAKRDEAQKAE 124


>gi|169165461 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 140

 Score = 93.6 bits (231), Expect = 3e-20
 Identities = 52/92 (56%), Positives = 65/92 (70%), Gaps = 8/92 (8%)

Query: 1   MPKRKSPENTEGKDGSKVTKQEPTRRSARLSAKPAPPKPEPKPRKTSAKKEPGAKISRGA 60
           +PKRK+  + +G D +KV K EP RRS R SAKPAPPKPEPKP+K  AKK  G KI +G 
Sbjct: 51  VPKRKAEGDAKG-DKAKV-KDEPQRRSMRFSAKPAPPKPEPKPKKAPAKK--GEKIPKGK 106

Query: 61  KGKKEEKQEAGKEGTAPSENGETKAEEAQKTE 92
           KG    K +AG+EG  P+ENG+ K ++AQK E
Sbjct: 107 KG----KADAGEEGNNPAENGDAKTDQAQKAE 134


>gi|239749851 PREDICTED: similar to hCG2040565 [Homo sapiens]
          Length = 171

 Score = 93.6 bits (231), Expect = 3e-20
 Identities = 51/92 (55%), Positives = 66/92 (71%), Gaps = 6/92 (6%)

Query: 1   MPKRKSPENTEGKDGSKVTKQEPTRRSARLSAKPAPPKPEPKPRKTSAKKEPGAKISRGA 60
           +PKRK+  + +G D +KV K +P RRS RLSAKPAPPKPEPKP+   AKK  G K+ +G 
Sbjct: 80  VPKRKAEGDAKG-DKAKV-KDKPQRRSMRLSAKPAPPKPEPKPKNAPAKK--GEKVPKGK 135

Query: 61  KGKKEEKQEAGKEGTAPSENGETKAEEAQKTE 92
           KG +  + +AGKEG  P+ENG+ K +EAQK E
Sbjct: 136 KGAR--RADAGKEGNNPAENGDAKRDEAQKAE 165


>gi|169165899 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 140

 Score = 93.6 bits (231), Expect = 3e-20
 Identities = 52/92 (56%), Positives = 65/92 (70%), Gaps = 8/92 (8%)

Query: 1   MPKRKSPENTEGKDGSKVTKQEPTRRSARLSAKPAPPKPEPKPRKTSAKKEPGAKISRGA 60
           +PKRK+  + +G D +KV K EP RRS R SAKPAPPKPEPKP+K  AKK  G KI +G 
Sbjct: 51  VPKRKAEGDAKG-DKAKV-KDEPQRRSMRFSAKPAPPKPEPKPKKAPAKK--GEKIPKGK 106

Query: 61  KGKKEEKQEAGKEGTAPSENGETKAEEAQKTE 92
           KG    K +AG+EG  P+ENG+ K ++AQK E
Sbjct: 107 KG----KADAGEEGNNPAENGDAKTDQAQKAE 134


>gi|239744152 PREDICTED: hypothetical protein XP_002343066 [Homo
           sapiens]
          Length = 171

 Score = 93.6 bits (231), Expect = 3e-20
 Identities = 51/92 (55%), Positives = 66/92 (71%), Gaps = 6/92 (6%)

Query: 1   MPKRKSPENTEGKDGSKVTKQEPTRRSARLSAKPAPPKPEPKPRKTSAKKEPGAKISRGA 60
           +PKRK+  + +G D +KV K +P RRS RLSAKPAPPKPEPKP+   AKK  G K+ +G 
Sbjct: 80  VPKRKAEGDAKG-DKAKV-KDKPQRRSMRLSAKPAPPKPEPKPKNAPAKK--GEKVPKGK 135

Query: 61  KGKKEEKQEAGKEGTAPSENGETKAEEAQKTE 92
           KG +  + +AGKEG  P+ENG+ K +EAQK E
Sbjct: 136 KGAR--RADAGKEGNNPAENGDAKRDEAQKAE 165


>gi|169165087 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 140

 Score = 93.6 bits (231), Expect = 3e-20
 Identities = 52/92 (56%), Positives = 65/92 (70%), Gaps = 8/92 (8%)

Query: 1   MPKRKSPENTEGKDGSKVTKQEPTRRSARLSAKPAPPKPEPKPRKTSAKKEPGAKISRGA 60
           +PKRK+  + +G D +KV K EP RRS R SAKPAPPKPEPKP+K  AKK  G KI +G 
Sbjct: 51  VPKRKAEGDAKG-DKAKV-KDEPQRRSMRFSAKPAPPKPEPKPKKAPAKK--GEKIPKGK 106

Query: 61  KGKKEEKQEAGKEGTAPSENGETKAEEAQKTE 92
           KG    K +AG+EG  P+ENG+ K ++AQK E
Sbjct: 107 KG----KADAGEEGNNPAENGDAKTDQAQKAE 134


>gi|10835240 high mobility group nucleosomal binding domain 4
          [Homo sapiens]
          Length = 90

 Score = 89.4 bits (220), Expect = 6e-19
 Identities = 50/92 (54%), Positives = 65/92 (70%), Gaps = 8/92 (8%)

Query: 1  MPKRKSPENTEGKDGSKVTKQEPTRRSARLSAKPAPPKPEPKPRKTSAKKEPGAKISRGA 60
          MPKRK+  + +G D +KV K EP RRSARLSAKPAPPKPEP+P+K SAKK  G K+ +G 
Sbjct: 1  MPKRKAKGDAKG-DKAKV-KDEPQRRSARLSAKPAPPKPEPRPKKASAKK--GEKLPKGR 56

Query: 61 KGKKEEKQEAGKEGTAPSENGETKAEEAQKTE 92
          KG    K +AGK+G  P++N +    ++QK E
Sbjct: 57 KG----KADAGKDGNNPAKNRDASTLQSQKAE 84


>gi|169163639 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 90

 Score = 87.0 bits (214), Expect = 3e-18
 Identities = 52/93 (55%), Positives = 60/93 (64%), Gaps = 8/93 (8%)

Query: 1  MPKRKSPENTEGKDGSKVTKQEPTRRSARLSAKPAPPKPEPKPRKTSAKKEPGAKISRGA 60
          MPKRK   + +G D +KV K EP RR  RLSAKPAPP PEPKP K  AKK  G K+ +G 
Sbjct: 1  MPKRKGEGDAKG-DKAKV-KNEPQRRPMRLSAKPAPPTPEPKPEKAPAKK--GEKVPKGK 56

Query: 61 KGKKEEKQEAGKEGTAPSENGETKAEEAQKTES 93
          KG    K  AGKEG   +ENG+ K + AQK ES
Sbjct: 57 KG----KAYAGKEGNNLAENGDAKTDGAQKAES 85


>gi|169162318 PREDICTED: similar to hCG2040565 [Homo sapiens]
          Length = 193

 Score = 87.0 bits (214), Expect = 3e-18
 Identities = 50/92 (54%), Positives = 63/92 (68%), Gaps = 8/92 (8%)

Query: 1   MPKRKSPENTEGKDGSKVTKQEPTRRSARLSAKPAPPKPEPKPRKTSAKKEPGAKISRGA 60
           MPK K+  + +G D +KV K EP RRSARLSAKP+ PKPEPKP+K  AKK  G K+ +  
Sbjct: 36  MPKGKAEGDPKG-DKAKV-KDEPQRRSARLSAKPSSPKPEPKPKKAPAKK--GEKVLKEK 91

Query: 61  KGKKEEKQEAGKEGTAPSENGETKAEEAQKTE 92
           KG    K +AGKEG  P+ENG+ K ++ QK E
Sbjct: 92  KG----KADAGKEGNNPAENGDAKTDQEQKAE 119


>gi|88954992 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 90

 Score = 87.0 bits (214), Expect = 3e-18
 Identities = 52/93 (55%), Positives = 60/93 (64%), Gaps = 8/93 (8%)

Query: 1  MPKRKSPENTEGKDGSKVTKQEPTRRSARLSAKPAPPKPEPKPRKTSAKKEPGAKISRGA 60
          MPKRK   + +G D +KV K EP RR  RLSAKPAPP PEPKP K  AKK  G K+ +G 
Sbjct: 1  MPKRKGEGDAKG-DKAKV-KNEPQRRPMRLSAKPAPPTPEPKPEKAPAKK--GEKVPKGK 56

Query: 61 KGKKEEKQEAGKEGTAPSENGETKAEEAQKTES 93
          KG    K  AGKEG   +ENG+ K + AQK ES
Sbjct: 57 KG----KAYAGKEGNNLAENGDAKTDGAQKAES 85


>gi|169161838 PREDICTED: similar to hCG2040565 [Homo sapiens]
          Length = 176

 Score = 87.0 bits (214), Expect = 3e-18
 Identities = 50/92 (54%), Positives = 63/92 (68%), Gaps = 8/92 (8%)

Query: 1   MPKRKSPENTEGKDGSKVTKQEPTRRSARLSAKPAPPKPEPKPRKTSAKKEPGAKISRGA 60
           MPK K+  + +G D +KV K EP RRSARLSAKP+ PKPEPKP+K  AKK  G K+ +  
Sbjct: 19  MPKGKAEGDPKG-DKAKV-KDEPQRRSARLSAKPSSPKPEPKPKKAPAKK--GEKVLKEK 74

Query: 61  KGKKEEKQEAGKEGTAPSENGETKAEEAQKTE 92
           KG    K +AGKEG  P+ENG+ K ++ QK E
Sbjct: 75  KG----KADAGKEGNNPAENGDAKTDQEQKAE 102


>gi|88953166 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 90

 Score = 87.0 bits (214), Expect = 3e-18
 Identities = 52/93 (55%), Positives = 60/93 (64%), Gaps = 8/93 (8%)

Query: 1  MPKRKSPENTEGKDGSKVTKQEPTRRSARLSAKPAPPKPEPKPRKTSAKKEPGAKISRGA 60
          MPKRK   + +G D +KV K EP RR  RLSAKPAPP PEPKP K  AKK  G K+ +G 
Sbjct: 1  MPKRKGEGDAKG-DKAKV-KNEPQRRPMRLSAKPAPPTPEPKPEKAPAKK--GEKVPKGK 56

Query: 61 KGKKEEKQEAGKEGTAPSENGETKAEEAQKTES 93
          KG    K  AGKEG   +ENG+ K + AQK ES
Sbjct: 57 KG----KAYAGKEGNNLAENGDAKTDGAQKAES 85


>gi|169162671 PREDICTED: similar to hCG2040565 [Homo sapiens]
          Length = 176

 Score = 87.0 bits (214), Expect = 3e-18
 Identities = 50/92 (54%), Positives = 63/92 (68%), Gaps = 8/92 (8%)

Query: 1   MPKRKSPENTEGKDGSKVTKQEPTRRSARLSAKPAPPKPEPKPRKTSAKKEPGAKISRGA 60
           MPK K+  + +G D +KV K EP RRSARLSAKP+ PKPEPKP+K  AKK  G K+ +  
Sbjct: 19  MPKGKAEGDPKG-DKAKV-KDEPQRRSARLSAKPSSPKPEPKPKKAPAKK--GEKVLKEK 74

Query: 61  KGKKEEKQEAGKEGTAPSENGETKAEEAQKTE 92
           KG    K +AGKEG  P+ENG+ K ++ QK E
Sbjct: 75  KG----KADAGKEGNNPAENGDAKTDQEQKAE 102


>gi|169209024 PREDICTED: similar to high-mobility group
          nucleosomal binding domain 2 [Homo sapiens]
          Length = 90

 Score = 84.3 bits (207), Expect = 2e-17
 Identities = 47/92 (51%), Positives = 61/92 (66%), Gaps = 8/92 (8%)

Query: 1  MPKRKSPENTEGKDGSKVTKQEPTRRSARLSAKPAPPKPEPKPRKTSAKKEPGAKISRGA 60
          MPKRK+  + +G D +KV + +P RRSARLS KPAPPKPE KP+K  AK   G K+ +G 
Sbjct: 1  MPKRKAEGDAKG-DKAKV-RDKPQRRSARLSTKPAPPKPETKPKKVPAKN--GEKVLKGE 56

Query: 61 KGKKEEKQEAGKEGTAPSENGETKAEEAQKTE 92
           G    K + GKEG  P+ENG+ K ++ QK E
Sbjct: 57 MG----KADTGKEGNKPAENGDAKTDQTQKGE 84


>gi|113425750 PREDICTED: similar to high-mobility group
          nucleosomal binding domain 2 [Homo sapiens]
          Length = 90

 Score = 84.3 bits (207), Expect = 2e-17
 Identities = 47/92 (51%), Positives = 61/92 (66%), Gaps = 8/92 (8%)

Query: 1  MPKRKSPENTEGKDGSKVTKQEPTRRSARLSAKPAPPKPEPKPRKTSAKKEPGAKISRGA 60
          MPKRK+  + +G D +KV + +P RRSARLS KPAPPKPE KP+K  AK   G K+ +G 
Sbjct: 1  MPKRKAEGDAKG-DKAKV-RDKPQRRSARLSTKPAPPKPETKPKKVPAKN--GEKVLKGE 56

Query: 61 KGKKEEKQEAGKEGTAPSENGETKAEEAQKTE 92
           G    K + GKEG  P+ENG+ K ++ QK E
Sbjct: 57 MG----KADTGKEGNKPAENGDAKTDQTQKGE 84


>gi|113425298 PREDICTED: similar to high-mobility group
          nucleosomal binding domain 2 [Homo sapiens]
          Length = 90

 Score = 84.3 bits (207), Expect = 2e-17
 Identities = 47/92 (51%), Positives = 61/92 (66%), Gaps = 8/92 (8%)

Query: 1  MPKRKSPENTEGKDGSKVTKQEPTRRSARLSAKPAPPKPEPKPRKTSAKKEPGAKISRGA 60
          MPKRK+  + +G D +KV + +P RRSARLS KPAPPKPE KP+K  AK   G K+ +G 
Sbjct: 1  MPKRKAEGDAKG-DKAKV-RDKPQRRSARLSTKPAPPKPETKPKKVPAKN--GEKVLKGE 56

Query: 61 KGKKEEKQEAGKEGTAPSENGETKAEEAQKTE 92
           G    K + GKEG  P+ENG+ K ++ QK E
Sbjct: 57 MG----KADTGKEGNKPAENGDAKTDQTQKGE 84


>gi|239753184 PREDICTED: similar to hCG2040565 [Homo sapiens]
          Length = 197

 Score = 84.0 bits (206), Expect = 2e-17
 Identities = 47/92 (51%), Positives = 62/92 (67%), Gaps = 9/92 (9%)

Query: 1   MPKRKSPENTEGKDGSKVTKQEPTRRSARLSAKPAPPKPEPKPRKTSAKKEPGAKISRGA 60
           +PKRK+  + +G D +KV    P RRS RLSAKPAPPKPEPKP+K  AKK  G K+ +G 
Sbjct: 109 LPKRKTEGDVKG-DKAKV--DTPQRRSTRLSAKPAPPKPEPKPKKAPAKK--GEKVPKGK 163

Query: 61  KGKKEEKQEAGKEGTAPSENGETKAEEAQKTE 92
           KG    K +AGKEG  P+E G+   ++A++ E
Sbjct: 164 KG----KADAGKEGNYPAEKGDAITDQAREAE 191


>gi|239747758 PREDICTED: hypothetical protein XP_002348261 [Homo
           sapiens]
          Length = 197

 Score = 84.0 bits (206), Expect = 2e-17
 Identities = 47/92 (51%), Positives = 62/92 (67%), Gaps = 9/92 (9%)

Query: 1   MPKRKSPENTEGKDGSKVTKQEPTRRSARLSAKPAPPKPEPKPRKTSAKKEPGAKISRGA 60
           +PKRK+  + +G D +KV    P RRS RLSAKPAPPKPEPKP+K  AKK  G K+ +G 
Sbjct: 109 LPKRKTEGDVKG-DKAKV--DTPQRRSTRLSAKPAPPKPEPKPKKAPAKK--GEKVPKGK 163

Query: 61  KGKKEEKQEAGKEGTAPSENGETKAEEAQKTE 92
           KG    K +AGKEG  P+E G+   ++A++ E
Sbjct: 164 KG----KADAGKEGNYPAEKGDAITDQAREAE 191


>gi|239741624 PREDICTED: hypothetical protein XP_002342251 [Homo
           sapiens]
          Length = 197

 Score = 84.0 bits (206), Expect = 2e-17
 Identities = 47/92 (51%), Positives = 62/92 (67%), Gaps = 9/92 (9%)

Query: 1   MPKRKSPENTEGKDGSKVTKQEPTRRSARLSAKPAPPKPEPKPRKTSAKKEPGAKISRGA 60
           +PKRK+  + +G D +KV    P RRS RLSAKPAPPKPEPKP+K  AKK  G K+ +G 
Sbjct: 109 LPKRKTEGDVKG-DKAKV--DTPQRRSTRLSAKPAPPKPEPKPKKAPAKK--GEKVPKGK 163

Query: 61  KGKKEEKQEAGKEGTAPSENGETKAEEAQKTE 92
           KG    K +AGKEG  P+E G+   ++A++ E
Sbjct: 164 KG----KADAGKEGNYPAEKGDAITDQAREAE 191


>gi|169202834 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 103

 Score = 83.6 bits (205), Expect = 3e-17
 Identities = 46/91 (50%), Positives = 58/91 (63%), Gaps = 8/91 (8%)

Query: 2  PKRKSPENTEGKDGSKVTKQEPTRRSARLSAKPAPPKPEPKPRKTSAKKEPGAKISRGAK 61
          P+RK+  + +G       K +P RRS RL+AKPAPPKP  KP+K  AK   G K+ +G K
Sbjct: 15 PRRKAKGDAKGVKAK--VKDKPQRRSVRLTAKPAPPKPGSKPKKGPAKN--GEKVLKGKK 70

Query: 62 GKKEEKQEAGKEGTAPSENGETKAEEAQKTE 92
          G    K +AGKEG  P+ENGETK + AQK E
Sbjct: 71 G----KADAGKEGNNPAENGETKTDHAQKAE 97


>gi|89034591 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 103

 Score = 83.6 bits (205), Expect = 3e-17
 Identities = 46/91 (50%), Positives = 58/91 (63%), Gaps = 8/91 (8%)

Query: 2  PKRKSPENTEGKDGSKVTKQEPTRRSARLSAKPAPPKPEPKPRKTSAKKEPGAKISRGAK 61
          P+RK+  + +G       K +P RRS RL+AKPAPPKP  KP+K  AK   G K+ +G K
Sbjct: 15 PRRKAKGDAKGVKAK--VKDKPQRRSVRLTAKPAPPKPGSKPKKGPAKN--GEKVLKGKK 70

Query: 62 GKKEEKQEAGKEGTAPSENGETKAEEAQKTE 92
          G    K +AGKEG  P+ENGETK + AQK E
Sbjct: 71 G----KADAGKEGNNPAENGETKTDHAQKAE 97


>gi|89033815 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 103

 Score = 83.6 bits (205), Expect = 3e-17
 Identities = 46/91 (50%), Positives = 58/91 (63%), Gaps = 8/91 (8%)

Query: 2  PKRKSPENTEGKDGSKVTKQEPTRRSARLSAKPAPPKPEPKPRKTSAKKEPGAKISRGAK 61
          P+RK+  + +G       K +P RRS RL+AKPAPPKP  KP+K  AK   G K+ +G K
Sbjct: 15 PRRKAKGDAKGVKAK--VKDKPQRRSVRLTAKPAPPKPGSKPKKGPAKN--GEKVLKGKK 70

Query: 62 GKKEEKQEAGKEGTAPSENGETKAEEAQKTE 92
          G    K +AGKEG  P+ENGETK + AQK E
Sbjct: 71 G----KADAGKEGNNPAENGETKTDHAQKAE 97


>gi|169208981 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 90

 Score = 69.7 bits (169), Expect = 5e-13
 Identities = 41/92 (44%), Positives = 57/92 (61%), Gaps = 8/92 (8%)

Query: 1  MPKRKSPENTEGKDGSKVTKQEPTRRSARLSAKPAPPKPEPKPRKTSAKKEPGAKISRGA 60
          MPKRK+ E    +D +K+ K +   RS +LS KPA PKP+ KP+K   KK  G K+S+G 
Sbjct: 1  MPKRKA-EGDAKEDKAKI-KDKLQGRSTKLSGKPALPKPQLKPKKAPTKK--GEKVSKGE 56

Query: 61 KGKKEEKQEAGKEGTAPSENGETKAEEAQKTE 92
          KG+    +E  K    P+ENG+ + E+AQK E
Sbjct: 57 KGRANSDKEVNK----PAENGDARTEKAQKAE 84


>gi|89039047 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 90

 Score = 69.7 bits (169), Expect = 5e-13
 Identities = 41/92 (44%), Positives = 57/92 (61%), Gaps = 8/92 (8%)

Query: 1  MPKRKSPENTEGKDGSKVTKQEPTRRSARLSAKPAPPKPEPKPRKTSAKKEPGAKISRGA 60
          MPKRK+ E    +D +K+ K +   RS +LS KPA PKP+ KP+K   KK  G K+S+G 
Sbjct: 1  MPKRKA-EGDAKEDKAKI-KDKLQGRSTKLSGKPALPKPQLKPKKAPTKK--GEKVSKGE 56

Query: 61 KGKKEEKQEAGKEGTAPSENGETKAEEAQKTE 92
          KG+    +E  K    P+ENG+ + E+AQK E
Sbjct: 57 KGRANSDKEVNK----PAENGDARTEKAQKAE 84


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.292    0.115    0.304 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,062,930
Number of Sequences: 37866
Number of extensions: 287796
Number of successful extensions: 5120
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 576
Number of HSP's successfully gapped in prelim test: 485
Number of HSP's that attempted gapping in prelim test: 2554
Number of HSP's gapped (non-prelim): 2549
length of query: 99
length of database: 18,247,518
effective HSP length: 70
effective length of query: 29
effective length of database: 15,596,898
effective search space: 452310042
effective search space used: 452310042
T: 11
A: 40
X1: 17 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 44 (21.6 bits)
S2: 55 (25.8 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.