Search of human proteins with 113414298

Search of human proteins with 113414298

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|113414298 PREDICTED: similar to zinc finger and BTB domain
containing 8 opposite strand [Homo sapiens]
         (136 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|169164528 PREDICTED: similar to zinc finger and BTB domain co...   281   1e-76
gi|113414298 PREDICTED: similar to zinc finger and BTB domain co...   281   1e-76
gi|113413492 PREDICTED: similar to zinc finger and BTB domain co...   281   1e-76
gi|30425510 zinc finger and BTB domain containing 8 opposite str...   223   4e-59
gi|239748466 PREDICTED: similar to zinc finger and BTB domain co...   222   6e-59
gi|63252910 IQ motif and WD repeats 1 isoform b [Homo sapiens]         29   1.4  
gi|63252908 IQ motif and WD repeats 1 isoform a [Homo sapiens]         29   1.4  
gi|4559408 colony stimulating factor 2 receptor, beta precursor ...    28   1.8  
gi|110238585 hypothetical protein LOC84734 [Homo sapiens]              28   1.8  
gi|65508004 Wilms tumor 1 isoform D [Homo sapiens]                     27   5.1  
gi|65507908 Wilms tumor 1 isoform C [Homo sapiens]                     27   5.1  
gi|65507817 Wilms tumor 1 isoform B [Homo sapiens]                     27   5.1  
gi|65507714 Wilms tumor 1 isoform A [Homo sapiens]                     27   5.1  
gi|11415048 nucleosome assembly protein 1-like 2 [Homo sapiens]        26   8.8  
gi|156564238 hypothetical protein LOC129293 [Homo sapiens]             26   8.8  
gi|32699038 sterile alpha motif domain containing 7 [Homo sapiens]     26   8.8  

>gi|169164528 PREDICTED: similar to zinc finger and BTB domain
           containing 8 opposite strand [Homo sapiens]
          Length = 136

 Score =  281 bits (719), Expect = 1e-76
 Identities = 136/136 (100%), Positives = 136/136 (100%)

Query: 1   MAQAEEDVRDYNLTEEQKAIKAKYPPVNRKYEYLDHTADVQLHAWGDTLEEAFEQCAMAM 60
           MAQAEEDVRDYNLTEEQKAIKAKYPPVNRKYEYLDHTADVQLHAWGDTLEEAFEQCAMAM
Sbjct: 1   MAQAEEDVRDYNLTEEQKAIKAKYPPVNRKYEYLDHTADVQLHAWGDTLEEAFEQCAMAM 60

Query: 61  FGYMTDTGTVEPLPTVEVETQGNDLQTLLFHFLDEWLYKFSADEFFIPRVGRRVFIVQAS 120
           FGYMTDTGTVEPLPTVEVETQGNDLQTLLFHFLDEWLYKFSADEFFIPRVGRRVFIVQAS
Sbjct: 61  FGYMTDTGTVEPLPTVEVETQGNDLQTLLFHFLDEWLYKFSADEFFIPRVGRRVFIVQAS 120

Query: 121 SGNRSQGNNIFSNAGL 136
           SGNRSQGNNIFSNAGL
Sbjct: 121 SGNRSQGNNIFSNAGL 136


>gi|113414298 PREDICTED: similar to zinc finger and BTB domain
           containing 8 opposite strand [Homo sapiens]
          Length = 136

 Score =  281 bits (719), Expect = 1e-76
 Identities = 136/136 (100%), Positives = 136/136 (100%)

Query: 1   MAQAEEDVRDYNLTEEQKAIKAKYPPVNRKYEYLDHTADVQLHAWGDTLEEAFEQCAMAM 60
           MAQAEEDVRDYNLTEEQKAIKAKYPPVNRKYEYLDHTADVQLHAWGDTLEEAFEQCAMAM
Sbjct: 1   MAQAEEDVRDYNLTEEQKAIKAKYPPVNRKYEYLDHTADVQLHAWGDTLEEAFEQCAMAM 60

Query: 61  FGYMTDTGTVEPLPTVEVETQGNDLQTLLFHFLDEWLYKFSADEFFIPRVGRRVFIVQAS 120
           FGYMTDTGTVEPLPTVEVETQGNDLQTLLFHFLDEWLYKFSADEFFIPRVGRRVFIVQAS
Sbjct: 61  FGYMTDTGTVEPLPTVEVETQGNDLQTLLFHFLDEWLYKFSADEFFIPRVGRRVFIVQAS 120

Query: 121 SGNRSQGNNIFSNAGL 136
           SGNRSQGNNIFSNAGL
Sbjct: 121 SGNRSQGNNIFSNAGL 136


>gi|113413492 PREDICTED: similar to zinc finger and BTB domain
           containing 8 opposite strand [Homo sapiens]
          Length = 136

 Score =  281 bits (719), Expect = 1e-76
 Identities = 136/136 (100%), Positives = 136/136 (100%)

Query: 1   MAQAEEDVRDYNLTEEQKAIKAKYPPVNRKYEYLDHTADVQLHAWGDTLEEAFEQCAMAM 60
           MAQAEEDVRDYNLTEEQKAIKAKYPPVNRKYEYLDHTADVQLHAWGDTLEEAFEQCAMAM
Sbjct: 1   MAQAEEDVRDYNLTEEQKAIKAKYPPVNRKYEYLDHTADVQLHAWGDTLEEAFEQCAMAM 60

Query: 61  FGYMTDTGTVEPLPTVEVETQGNDLQTLLFHFLDEWLYKFSADEFFIPRVGRRVFIVQAS 120
           FGYMTDTGTVEPLPTVEVETQGNDLQTLLFHFLDEWLYKFSADEFFIPRVGRRVFIVQAS
Sbjct: 61  FGYMTDTGTVEPLPTVEVETQGNDLQTLLFHFLDEWLYKFSADEFFIPRVGRRVFIVQAS 120

Query: 121 SGNRSQGNNIFSNAGL 136
           SGNRSQGNNIFSNAGL
Sbjct: 121 SGNRSQGNNIFSNAGL 136


>gi|30425510 zinc finger and BTB domain containing 8 opposite strand
           [Homo sapiens]
          Length = 179

 Score =  223 bits (568), Expect = 4e-59
 Identities = 110/127 (86%), Positives = 115/127 (90%)

Query: 1   MAQAEEDVRDYNLTEEQKAIKAKYPPVNRKYEYLDHTADVQLHAWGDTLEEAFEQCAMAM 60
           MAQ EEDVRDYNLTEEQKAIKAKYPPVNRKYEYLDHTADVQLHAWGDTLEEAFEQCAMAM
Sbjct: 13  MAQEEEDVRDYNLTEEQKAIKAKYPPVNRKYEYLDHTADVQLHAWGDTLEEAFEQCAMAM 72

Query: 61  FGYMTDTGTVEPLPTVEVETQGNDLQTLLFHFLDEWLYKFSADEFFIPRVGRRVFIVQAS 120
           FGYMTDTGTVEPL TVEVETQG+DLQ+LLFHFLDEWLYKFSADEFFIPR  + + I Q +
Sbjct: 73  FGYMTDTGTVEPLQTVEVETQGDDLQSLLFHFLDEWLYKFSADEFFIPREVKVLSIDQRN 132

Query: 121 SGNRSQG 127
              RS G
Sbjct: 133 FKLRSIG 139


>gi|239748466 PREDICTED: similar to zinc finger and BTB domain
           containing 8 opposite strand [Homo sapiens]
          Length = 202

 Score =  222 bits (566), Expect = 6e-59
 Identities = 111/137 (81%), Positives = 118/137 (86%), Gaps = 3/137 (2%)

Query: 1   MAQAEEDVRDYNLTEEQKAIKAKYPPVNRKYEYLDHTADVQLHAWGDTLEEAFEQCAMAM 60
           MAQ E DVRDYNLTEEQKAIKA YPPVNR YEYLDHTADVQLH WGDTLEEAFEQCAMA+
Sbjct: 68  MAQKEGDVRDYNLTEEQKAIKANYPPVNRNYEYLDHTADVQLHTWGDTLEEAFEQCAMAI 127

Query: 61  FGYMTDTGTVEPLPTVEVETQGNDLQTLLFHFLDEWLYKFSADEFFIP-RVGRRVFIVQA 119
           FGYM DT TVEPL T+EVETQ  ++ T LFHFLDEWLYK +ADEFFIP  V RR+FIVQ+
Sbjct: 128 FGYMIDTRTVEPLQTIEVETQ--EVSTFLFHFLDEWLYKSNADEFFIPWEVKRRIFIVQS 185

Query: 120 SSGNRSQGNNIFSNAGL 136
            SGNRSQ  NIFSNAGL
Sbjct: 186 PSGNRSQSYNIFSNAGL 202


>gi|63252910 IQ motif and WD repeats 1 isoform b [Homo sapiens]
          Length = 860

 Score = 28.9 bits (63), Expect = 1.4
 Identities = 11/29 (37%), Positives = 17/29 (58%)

Query: 68  GTVEPLPTVEVETQGNDLQTLLFHFLDEW 96
           GT EP+ ++   T+G    T+  +F DEW
Sbjct: 471 GTGEPVLSLHYSTEGTTTSTIKLNFTDEW 499


>gi|63252908 IQ motif and WD repeats 1 isoform a [Homo sapiens]
          Length = 880

 Score = 28.9 bits (63), Expect = 1.4
 Identities = 11/29 (37%), Positives = 17/29 (58%)

Query: 68  GTVEPLPTVEVETQGNDLQTLLFHFLDEW 96
           GT EP+ ++   T+G    T+  +F DEW
Sbjct: 491 GTGEPVLSLHYSTEGTTTSTIKLNFTDEW 519


>gi|4559408 colony stimulating factor 2 receptor, beta precursor
           [Homo sapiens]
          Length = 897

 Score = 28.5 bits (62), Expect = 1.8
 Identities = 11/47 (23%), Positives = 25/47 (53%), Gaps = 4/47 (8%)

Query: 12  NLTEEQKAIKAKYPPVNRKYEYLDHTADVQLH----AWGDTLEEAFE 54
           N+T++  +   ++  +  +YE++DHT ++Q       W D+  E  +
Sbjct: 346 NVTKDGDSYSLRWETMKMRYEHIDHTFEIQYRKDTATWKDSKTETLQ 392


>gi|110238585 hypothetical protein LOC84734 [Homo sapiens]
          Length = 163

 Score = 28.5 bits (62), Expect = 1.8
 Identities = 17/41 (41%), Positives = 22/41 (53%), Gaps = 1/41 (2%)

Query: 5  EEDVRDYNLTEEQKAIKAKYPPVNRKYEYLDHTADVQLHAW 45
          EED    +L +  KA+ AK     R+  YL+ TA VQ  AW
Sbjct: 16 EEDEEGESL-DSVKALTAKLQLQTRRPSYLEWTAQVQSQAW 55


>gi|65508004 Wilms tumor 1 isoform D [Homo sapiens]
          Length = 517

 Score = 26.9 bits (58), Expect = 5.1
 Identities = 14/47 (29%), Positives = 25/47 (53%), Gaps = 3/47 (6%)

Query: 8   VRDYNLTEEQKAIKAKYPPVNRKYEYLDHTADVQLHAWGDTLEEAFE 54
           VR  + T E++     YP  N++Y  L H   +Q+H+   T E+ ++
Sbjct: 379 VRSASETSEKRPFMCAYPGCNKRYFKLSH---LQMHSRKHTGEKPYQ 422


>gi|65507908 Wilms tumor 1 isoform C [Homo sapiens]
          Length = 500

 Score = 26.9 bits (58), Expect = 5.1
 Identities = 14/47 (29%), Positives = 25/47 (53%), Gaps = 3/47 (6%)

Query: 8   VRDYNLTEEQKAIKAKYPPVNRKYEYLDHTADVQLHAWGDTLEEAFE 54
           VR  + T E++     YP  N++Y  L H   +Q+H+   T E+ ++
Sbjct: 362 VRSASETSEKRPFMCAYPGCNKRYFKLSH---LQMHSRKHTGEKPYQ 405


>gi|65507817 Wilms tumor 1 isoform B [Homo sapiens]
          Length = 514

 Score = 26.9 bits (58), Expect = 5.1
 Identities = 14/47 (29%), Positives = 25/47 (53%), Gaps = 3/47 (6%)

Query: 8   VRDYNLTEEQKAIKAKYPPVNRKYEYLDHTADVQLHAWGDTLEEAFE 54
           VR  + T E++     YP  N++Y  L H   +Q+H+   T E+ ++
Sbjct: 379 VRSASETSEKRPFMCAYPGCNKRYFKLSH---LQMHSRKHTGEKPYQ 422


>gi|65507714 Wilms tumor 1 isoform A [Homo sapiens]
          Length = 497

 Score = 26.9 bits (58), Expect = 5.1
 Identities = 14/47 (29%), Positives = 25/47 (53%), Gaps = 3/47 (6%)

Query: 8   VRDYNLTEEQKAIKAKYPPVNRKYEYLDHTADVQLHAWGDTLEEAFE 54
           VR  + T E++     YP  N++Y  L H   +Q+H+   T E+ ++
Sbjct: 362 VRSASETSEKRPFMCAYPGCNKRYFKLSH---LQMHSRKHTGEKPYQ 405


>gi|11415048 nucleosome assembly protein 1-like 2 [Homo sapiens]
          Length = 460

 Score = 26.2 bits (56), Expect = 8.8
 Identities = 21/83 (25%), Positives = 38/83 (45%), Gaps = 11/83 (13%)

Query: 46  GDTLEEAFEQCAMAMFGYMTDTGTVEPLPT---------VEVETQGNDLQTLLFHFLDEW 96
           GDT E++       + GY+ DT  VE LP           +++T+  +L++       + 
Sbjct: 77  GDTDEDSEADRPKGLIGYVLDTDFVESLPVKVKYRVLALKKLQTRAANLESKFLREFHDI 136

Query: 97  LYKFSADEFFIPRVGRRVFIVQA 119
             KF+  E + P + +R  I+ A
Sbjct: 137 ERKFA--EMYQPLLEKRRQIINA 157


>gi|156564238 hypothetical protein LOC129293 [Homo sapiens]
          Length = 456

 Score = 26.2 bits (56), Expect = 8.8
 Identities = 15/44 (34%), Positives = 25/44 (56%), Gaps = 1/44 (2%)

Query: 47  DTLEEAFEQCAMAMFGY-MTDTGTVEPLPTVEVETQGNDLQTLL 89
           D  +EAF Q ++  F   +TD  T+  L + ++  QG +LQ +L
Sbjct: 72  DNSKEAFLQSSIVYFELDLTDPYTISALTSCQMLPQGENLQDVL 115


>gi|32699038 sterile alpha motif domain containing 7 [Homo sapiens]
          Length = 446

 Score = 26.2 bits (56), Expect = 8.8
 Identities = 26/86 (30%), Positives = 39/86 (45%), Gaps = 18/86 (20%)

Query: 26  PVNRKYEYLDHTADVQLHAWGDTLEEAFEQCAMAMFGYMTD-TGTVEPLP------TVEV 78
           P +RK  +  HT  ++  AW D  EEA EQ    +F    +  G   P+P      T  +
Sbjct: 257 PTHRK-PWGSHTTTLKAKAWDDGKEEASEQ----IFATCDEKNGVCPPVPRPSLPGTHAL 311

Query: 79  ETQGNDLQTLLFHFLDEWLYKFSADE 104
            T G +L       LDE + K++ D+
Sbjct: 312 VTIGGNLS------LDEDIQKWTVDD 331


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.318    0.134    0.399 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 4,975,914
Number of Sequences: 37866
Number of extensions: 194434
Number of successful extensions: 384
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 7
Number of HSP's that attempted gapping in prelim test: 373
Number of HSP's gapped (non-prelim): 16
length of query: 136
length of database: 18,247,518
effective HSP length: 91
effective length of query: 45
effective length of database: 14,801,712
effective search space: 666077040
effective search space used: 666077040
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 56 (26.2 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.