Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Search of human proteins with 19115966
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|19115966 DIS3 mitotic control homolog (S. cerevisiae)-like
isoform 2 [Homo sapiens]
(971 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|219521928 DIS3 mitotic control homolog (S. cerevisiae)-like i... 1967 0.0
gi|19115966 DIS3 mitotic control homolog (S. cerevisiae)-like is... 1967 0.0
gi|190014623 DIS3 mitotic control isoform a [Homo sapiens] 509 e-144
gi|190014625 DIS3 mitotic control isoform b [Homo sapiens] 496 e-140
gi|134288890 DIS3 mitotic control homolog (S. cerevisiae)-like 2... 284 2e-76
gi|156105693 PPAR-alpha interacting complex protein 285 isoform ... 130 8e-30
gi|156105695 PPAR-alpha interacting complex protein 285 isoform ... 130 8e-30
gi|224809295 xeroderma pigmentosum, complementation group C isof... 32 2.2
gi|239740946 PREDICTED: hypothetical protein XP_002344104 isofor... 32 2.9
gi|239740944 PREDICTED: hypothetical protein XP_002344105 isofor... 32 2.9
gi|239740942 PREDICTED: hypothetical protein XP_002344106 isofor... 32 2.9
gi|32698714 hypothetical protein LOC284058 [Homo sapiens] 32 2.9
gi|126032345 sterile alpha motif domain containing 3 isoform b [... 32 3.8
gi|126032305 sterile alpha motif domain containing 3 isoform a [... 32 3.8
gi|165905601 proline-serine-threonine phosphatase interacting pr... 31 4.9
gi|50897852 coiled-coil domain containing 88A isoform 2 [Homo sa... 31 6.4
gi|208022632 coiled-coil domain containing 88A isoform 1 [Homo s... 31 6.4
gi|4503509 eukaryotic translation initiation factor 3, subunit 1... 30 8.4
gi|189011592 amyotrophic lateral sclerosis 2 (juvenile) chromoso... 30 8.4
gi|189011586 amyotrophic lateral sclerosis 2 (juvenile) chromoso... 30 8.4
>gi|219521928 DIS3 mitotic control homolog (S. cerevisiae)-like
isoform 1 [Homo sapiens]
Length = 1054
Score = 1967 bits (5095), Expect = 0.0
Identities = 971/971 (100%), Positives = 971/971 (100%)
Query: 1 MQTACQAVQHQRGRRQYNKLRNLLKDARHDCILFANEFQQCCYLPRERGESMEKWQTRSI 60
MQTACQAVQHQRGRRQYNKLRNLLKDARHDCILFANEFQQCCYLPRERGESMEKWQTRSI
Sbjct: 84 MQTACQAVQHQRGRRQYNKLRNLLKDARHDCILFANEFQQCCYLPRERGESMEKWQTRSI 143
Query: 61 YNAAVWYYHHCQDRMPIVMVTEDEEAIQQYGSETEGVFVITFKNYLDNFWPDLKAAHELC 120
YNAAVWYYHHCQDRMPIVMVTEDEEAIQQYGSETEGVFVITFKNYLDNFWPDLKAAHELC
Sbjct: 144 YNAAVWYYHHCQDRMPIVMVTEDEEAIQQYGSETEGVFVITFKNYLDNFWPDLKAAHELC 203
Query: 121 DSILQSRRERENESQESHGKEYPEHLPLEVLEAGIKSGRYIQGILNVNKHRAQIEAFVRL 180
DSILQSRRERENESQESHGKEYPEHLPLEVLEAGIKSGRYIQGILNVNKHRAQIEAFVRL
Sbjct: 204 DSILQSRRERENESQESHGKEYPEHLPLEVLEAGIKSGRYIQGILNVNKHRAQIEAFVRL 263
Query: 181 QGASSKDSDLVSDILIHGMKARNRSIHGDVVVVELLPKNEWKGRTVALCENDCDDKASGE 240
QGASSKDSDLVSDILIHGMKARNRSIHGDVVVVELLPKNEWKGRTVALCENDCDDKASGE
Sbjct: 264 QGASSKDSDLVSDILIHGMKARNRSIHGDVVVVELLPKNEWKGRTVALCENDCDDKASGE 323
Query: 241 SPSEPMPTGRVVGILQKNWRDYVVTFPSKEEVQSQGKNAQKILVTPWDYRIPKIRISTQQ 300
SPSEPMPTGRVVGILQKNWRDYVVTFPSKEEVQSQGKNAQKILVTPWDYRIPKIRISTQQ
Sbjct: 324 SPSEPMPTGRVVGILQKNWRDYVVTFPSKEEVQSQGKNAQKILVTPWDYRIPKIRISTQQ 383
Query: 301 AETLQDFRVVVRIDSWESTSVYPNGHFVRVLGRIGDLEGEIATILVENSISVIPFSEAQM 360
AETLQDFRVVVRIDSWESTSVYPNGHFVRVLGRIGDLEGEIATILVENSISVIPFSEAQM
Sbjct: 384 AETLQDFRVVVRIDSWESTSVYPNGHFVRVLGRIGDLEGEIATILVENSISVIPFSEAQM 443
Query: 361 CEMPVNTPESPWKVSPEEEQKRKDLRKSHLVFSIDPKGCEDVDDTLSVRTLNNGNLELGV 420
CEMPVNTPESPWKVSPEEEQKRKDLRKSHLVFSIDPKGCEDVDDTLSVRTLNNGNLELGV
Sbjct: 444 CEMPVNTPESPWKVSPEEEQKRKDLRKSHLVFSIDPKGCEDVDDTLSVRTLNNGNLELGV 503
Query: 421 HIADVTHFVAPNSYIDIEARTRATTYYLADRRYDMLPSVLSADLCSLLGGVDRYAVSIMW 480
HIADVTHFVAPNSYIDIEARTRATTYYLADRRYDMLPSVLSADLCSLLGGVDRYAVSIMW
Sbjct: 504 HIADVTHFVAPNSYIDIEARTRATTYYLADRRYDMLPSVLSADLCSLLGGVDRYAVSIMW 563
Query: 481 ELDKASYEIKKVWYGRTIIRSAYKLFYEAAQELLDGNLSVVDDIPEFKDLDEKSRQAKLE 540
ELDKASYEIKKVWYGRTIIRSAYKLFYEAAQELLDGNLSVVDDIPEFKDLDEKSRQAKLE
Sbjct: 564 ELDKASYEIKKVWYGRTIIRSAYKLFYEAAQELLDGNLSVVDDIPEFKDLDEKSRQAKLE 623
Query: 541 ELVWAIGKLTDIARHVRAKRDGCGALELEGVEVCVQLDDKKNIHDLIPKQPLEVHETVAE 600
ELVWAIGKLTDIARHVRAKRDGCGALELEGVEVCVQLDDKKNIHDLIPKQPLEVHETVAE
Sbjct: 624 ELVWAIGKLTDIARHVRAKRDGCGALELEGVEVCVQLDDKKNIHDLIPKQPLEVHETVAE 683
Query: 601 CMILANHWVAKKIWESFPHQALLRQHPPPHQEFFSELRECAKAKGFFIDTRSNKTLADSL 660
CMILANHWVAKKIWESFPHQALLRQHPPPHQEFFSELRECAKAKGFFIDTRSNKTLADSL
Sbjct: 684 CMILANHWVAKKIWESFPHQALLRQHPPPHQEFFSELRECAKAKGFFIDTRSNKTLADSL 743
Query: 661 DNANDPHDPIVNRLLRSMATQAMSNALYFSTGSCAEEEFHHYGLALDKYTHFTSPIRRYS 720
DNANDPHDPIVNRLLRSMATQAMSNALYFSTGSCAEEEFHHYGLALDKYTHFTSPIRRYS
Sbjct: 744 DNANDPHDPIVNRLLRSMATQAMSNALYFSTGSCAEEEFHHYGLALDKYTHFTSPIRRYS 803
Query: 721 DIVVHRLLMAAISKDKKMEIKGNLFSNKDLEELCRHINNRNQAAQHSQKQSTELFQCMYF 780
DIVVHRLLMAAISKDKKMEIKGNLFSNKDLEELCRHINNRNQAAQHSQKQSTELFQCMYF
Sbjct: 804 DIVVHRLLMAAISKDKKMEIKGNLFSNKDLEELCRHINNRNQAAQHSQKQSTELFQCMYF 863
Query: 781 KDKDPATEERCISDGVIYSIRTNGVLLFIPRFGIKGAAYLKNKDGLVISCGPDSCSEWKP 840
KDKDPATEERCISDGVIYSIRTNGVLLFIPRFGIKGAAYLKNKDGLVISCGPDSCSEWKP
Sbjct: 864 KDKDPATEERCISDGVIYSIRTNGVLLFIPRFGIKGAAYLKNKDGLVISCGPDSCSEWKP 923
Query: 841 GSLQRFQNKITSTTTDGESVTFHLFDHVTVRISIQASRCHSDTIRLEIISNKPYKIPNTE 900
GSLQRFQNKITSTTTDGESVTFHLFDHVTVRISIQASRCHSDTIRLEIISNKPYKIPNTE
Sbjct: 924 GSLQRFQNKITSTTTDGESVTFHLFDHVTVRISIQASRCHSDTIRLEIISNKPYKIPNTE 983
Query: 901 LIHQSSPLLKSELVKEVTKSVEEAQLAQEVKVNIIQEEYQEYRQTKGRSLYTLLEEIRDL 960
LIHQSSPLLKSELVKEVTKSVEEAQLAQEVKVNIIQEEYQEYRQTKGRSLYTLLEEIRDL
Sbjct: 984 LIHQSSPLLKSELVKEVTKSVEEAQLAQEVKVNIIQEEYQEYRQTKGRSLYTLLEEIRDL 1043
Query: 961 ALLDVSNNYGI 971
ALLDVSNNYGI
Sbjct: 1044 ALLDVSNNYGI 1054
>gi|19115966 DIS3 mitotic control homolog (S. cerevisiae)-like
isoform 2 [Homo sapiens]
Length = 971
Score = 1967 bits (5095), Expect = 0.0
Identities = 971/971 (100%), Positives = 971/971 (100%)
Query: 1 MQTACQAVQHQRGRRQYNKLRNLLKDARHDCILFANEFQQCCYLPRERGESMEKWQTRSI 60
MQTACQAVQHQRGRRQYNKLRNLLKDARHDCILFANEFQQCCYLPRERGESMEKWQTRSI
Sbjct: 1 MQTACQAVQHQRGRRQYNKLRNLLKDARHDCILFANEFQQCCYLPRERGESMEKWQTRSI 60
Query: 61 YNAAVWYYHHCQDRMPIVMVTEDEEAIQQYGSETEGVFVITFKNYLDNFWPDLKAAHELC 120
YNAAVWYYHHCQDRMPIVMVTEDEEAIQQYGSETEGVFVITFKNYLDNFWPDLKAAHELC
Sbjct: 61 YNAAVWYYHHCQDRMPIVMVTEDEEAIQQYGSETEGVFVITFKNYLDNFWPDLKAAHELC 120
Query: 121 DSILQSRRERENESQESHGKEYPEHLPLEVLEAGIKSGRYIQGILNVNKHRAQIEAFVRL 180
DSILQSRRERENESQESHGKEYPEHLPLEVLEAGIKSGRYIQGILNVNKHRAQIEAFVRL
Sbjct: 121 DSILQSRRERENESQESHGKEYPEHLPLEVLEAGIKSGRYIQGILNVNKHRAQIEAFVRL 180
Query: 181 QGASSKDSDLVSDILIHGMKARNRSIHGDVVVVELLPKNEWKGRTVALCENDCDDKASGE 240
QGASSKDSDLVSDILIHGMKARNRSIHGDVVVVELLPKNEWKGRTVALCENDCDDKASGE
Sbjct: 181 QGASSKDSDLVSDILIHGMKARNRSIHGDVVVVELLPKNEWKGRTVALCENDCDDKASGE 240
Query: 241 SPSEPMPTGRVVGILQKNWRDYVVTFPSKEEVQSQGKNAQKILVTPWDYRIPKIRISTQQ 300
SPSEPMPTGRVVGILQKNWRDYVVTFPSKEEVQSQGKNAQKILVTPWDYRIPKIRISTQQ
Sbjct: 241 SPSEPMPTGRVVGILQKNWRDYVVTFPSKEEVQSQGKNAQKILVTPWDYRIPKIRISTQQ 300
Query: 301 AETLQDFRVVVRIDSWESTSVYPNGHFVRVLGRIGDLEGEIATILVENSISVIPFSEAQM 360
AETLQDFRVVVRIDSWESTSVYPNGHFVRVLGRIGDLEGEIATILVENSISVIPFSEAQM
Sbjct: 301 AETLQDFRVVVRIDSWESTSVYPNGHFVRVLGRIGDLEGEIATILVENSISVIPFSEAQM 360
Query: 361 CEMPVNTPESPWKVSPEEEQKRKDLRKSHLVFSIDPKGCEDVDDTLSVRTLNNGNLELGV 420
CEMPVNTPESPWKVSPEEEQKRKDLRKSHLVFSIDPKGCEDVDDTLSVRTLNNGNLELGV
Sbjct: 361 CEMPVNTPESPWKVSPEEEQKRKDLRKSHLVFSIDPKGCEDVDDTLSVRTLNNGNLELGV 420
Query: 421 HIADVTHFVAPNSYIDIEARTRATTYYLADRRYDMLPSVLSADLCSLLGGVDRYAVSIMW 480
HIADVTHFVAPNSYIDIEARTRATTYYLADRRYDMLPSVLSADLCSLLGGVDRYAVSIMW
Sbjct: 421 HIADVTHFVAPNSYIDIEARTRATTYYLADRRYDMLPSVLSADLCSLLGGVDRYAVSIMW 480
Query: 481 ELDKASYEIKKVWYGRTIIRSAYKLFYEAAQELLDGNLSVVDDIPEFKDLDEKSRQAKLE 540
ELDKASYEIKKVWYGRTIIRSAYKLFYEAAQELLDGNLSVVDDIPEFKDLDEKSRQAKLE
Sbjct: 481 ELDKASYEIKKVWYGRTIIRSAYKLFYEAAQELLDGNLSVVDDIPEFKDLDEKSRQAKLE 540
Query: 541 ELVWAIGKLTDIARHVRAKRDGCGALELEGVEVCVQLDDKKNIHDLIPKQPLEVHETVAE 600
ELVWAIGKLTDIARHVRAKRDGCGALELEGVEVCVQLDDKKNIHDLIPKQPLEVHETVAE
Sbjct: 541 ELVWAIGKLTDIARHVRAKRDGCGALELEGVEVCVQLDDKKNIHDLIPKQPLEVHETVAE 600
Query: 601 CMILANHWVAKKIWESFPHQALLRQHPPPHQEFFSELRECAKAKGFFIDTRSNKTLADSL 660
CMILANHWVAKKIWESFPHQALLRQHPPPHQEFFSELRECAKAKGFFIDTRSNKTLADSL
Sbjct: 601 CMILANHWVAKKIWESFPHQALLRQHPPPHQEFFSELRECAKAKGFFIDTRSNKTLADSL 660
Query: 661 DNANDPHDPIVNRLLRSMATQAMSNALYFSTGSCAEEEFHHYGLALDKYTHFTSPIRRYS 720
DNANDPHDPIVNRLLRSMATQAMSNALYFSTGSCAEEEFHHYGLALDKYTHFTSPIRRYS
Sbjct: 661 DNANDPHDPIVNRLLRSMATQAMSNALYFSTGSCAEEEFHHYGLALDKYTHFTSPIRRYS 720
Query: 721 DIVVHRLLMAAISKDKKMEIKGNLFSNKDLEELCRHINNRNQAAQHSQKQSTELFQCMYF 780
DIVVHRLLMAAISKDKKMEIKGNLFSNKDLEELCRHINNRNQAAQHSQKQSTELFQCMYF
Sbjct: 721 DIVVHRLLMAAISKDKKMEIKGNLFSNKDLEELCRHINNRNQAAQHSQKQSTELFQCMYF 780
Query: 781 KDKDPATEERCISDGVIYSIRTNGVLLFIPRFGIKGAAYLKNKDGLVISCGPDSCSEWKP 840
KDKDPATEERCISDGVIYSIRTNGVLLFIPRFGIKGAAYLKNKDGLVISCGPDSCSEWKP
Sbjct: 781 KDKDPATEERCISDGVIYSIRTNGVLLFIPRFGIKGAAYLKNKDGLVISCGPDSCSEWKP 840
Query: 841 GSLQRFQNKITSTTTDGESVTFHLFDHVTVRISIQASRCHSDTIRLEIISNKPYKIPNTE 900
GSLQRFQNKITSTTTDGESVTFHLFDHVTVRISIQASRCHSDTIRLEIISNKPYKIPNTE
Sbjct: 841 GSLQRFQNKITSTTTDGESVTFHLFDHVTVRISIQASRCHSDTIRLEIISNKPYKIPNTE 900
Query: 901 LIHQSSPLLKSELVKEVTKSVEEAQLAQEVKVNIIQEEYQEYRQTKGRSLYTLLEEIRDL 960
LIHQSSPLLKSELVKEVTKSVEEAQLAQEVKVNIIQEEYQEYRQTKGRSLYTLLEEIRDL
Sbjct: 901 LIHQSSPLLKSELVKEVTKSVEEAQLAQEVKVNIIQEEYQEYRQTKGRSLYTLLEEIRDL 960
Query: 961 ALLDVSNNYGI 971
ALLDVSNNYGI
Sbjct: 961 ALLDVSNNYGI 971
>gi|190014623 DIS3 mitotic control isoform a [Homo sapiens]
Length = 958
Score = 509 bits (1310), Expect = e-144
Identities = 327/915 (35%), Positives = 499/915 (54%), Gaps = 103/915 (11%)
Query: 1 MQTACQAVQHQRGRRQYNKLRNLLKDARHDCILFANEFQQCCYLPRERGESMEKWQTRSI 60
+QT Q V++ R Y ++R++ + F NE + Y+ +E+GE+ R+I
Sbjct: 91 LQTVLQEVRN-RSAPVYKRIRDVTNNQEKHFYTFTNEHHRETYVEQEQGENANDRNDRAI 149
Query: 61 YNAAVWYYHHCQ-----DRMPIVMVTED----EEAIQQYGSETEGVFVITFKNYLDNFWP 111
AA WY H + +++ ++ +T D E+AI+ EG+ T + Y+ +
Sbjct: 150 RVAAKWYNEHLKKMSADNQLQVIFITNDRRNKEKAIE------EGIPAFTCEEYVKS--- 200
Query: 112 DLKAAHELCDSILQSRRERENESQESHGKEYPEHLPLEVLEAGIKSGRYIQGILNVNKHR 171
L A EL D + + E ES + EHLPL L+ GIKSG Y+QG ++
Sbjct: 201 -LTANPELIDRL--ACLSEEGNEIESGKIIFSEHLPLSKLQQGIKSGTYLQGTFRASREN 257
Query: 172 AQIEAFVRLQGASSKDSDLVSDILIHGMKARNRSIHGDVVVVELLPKNEWKGRTVALCEN 231
+EA V + G D++ +I++ G+K NR++H D+V VELLPK++W + + +
Sbjct: 258 -YLEATVWIHG----DNEENKEIILQGLKHLNRAVHEDIVAVELLPKSQWVAPSSVVLHD 312
Query: 232 DCDDKASGESPSEP-------------MPTGRVVGILQKNWRDYVVTFPSKEEVQSQGKN 278
+ ++ E E PTGRVVGI+++NWR Y SK ++ K
Sbjct: 313 EGQNEEDVEKEEETERMLKTAVSEKMLKPTGRVVGIIKRNWRPYCGML-SKSDI----KE 367
Query: 279 AQKILVTPWDYRIPKIRISTQQAETLQDFRVVVRIDSWESTSVYPNGHFVRVLGRIGDLE 338
+++ L TP D RIP+IRI T+QA TL+ R++V ID W S YPNGHFVR LG +G+ E
Sbjct: 368 SRRHLFTPADKRIPRIRIETRQASTLEGRRIIVAIDGWPRNSRYPNGHFVRNLGDVGEKE 427
Query: 339 GEIATILVENSISVIPFSEAQMCEMPVNTPESPWKVSPEEEQKRKDLRKSHL-VFSIDPK 397
E +L+E+ + PFS+A + +P + PW ++ ++ + R+DLR HL + S+DP
Sbjct: 428 TETEVLLLEHDVPHQPFSQAVLSFLP----KMPWSITEKDMKNREDLR--HLCICSVDPP 481
Query: 398 GCEDVDDTLSVRTLNNGNLELGVHIADVTHFVAPNSYIDIEARTRATTYYLADRRYDMLP 457
GC D+DD L R L NGNLE+GVHIADV+HF+ P + +D E+ R TT YL ++R DM+P
Sbjct: 482 GCTDIDDALHCRELENGNLEVGVHIADVSHFIRPGNALDQESARRGTTVYLCEKRIDMVP 541
Query: 458 SVLSADLCSLLGGVDRYAVSIMWELDKASYEIKKVWYGRTIIRSAYKLFYEAAQELLDGN 517
+LS++LCSL VDR A S +WE++ + EI K + +++I S L Y AQ +D +
Sbjct: 542 ELLSSNLCSLKCDVDRLAFSCIWEMNH-NAEILKTKFTKSVINSKASLTYAEAQLRID-S 599
Query: 518 LSVVDDIPEFKDLDEKSRQAKLEELVWAIGKLTDIARHVRAKRDGCGALELEGVEVCVQL 577
++ DDI ++ L +A+ ++ +R GAL L EV +
Sbjct: 600 ANMNDDI------------------TTSLRGLNKLAKILKKRRIEKGALTLSSPEVRFHM 641
Query: 578 DDKKNIHDLIPKQPLEVHET---VAECMILANHWVAKKIWESFPHQALLRQHPPPHQEFF 634
D + HD I Q E+ ET V E M+LAN VAKKI E F ALLR+HP P +
Sbjct: 642 DSE--THDPIDLQTKELRETNSMVEEFMLLANISVAKKIHEEFSEHALLRKHPAPPPSNY 699
Query: 635 SELRECAKAKGFFIDTRSNKTLADSLDNANDPHDPIVNRLLRSMATQAMSNALYFSTGSC 694
L + A+++ I T + K+LA+SLD A P P +N LLR +AT+ M A+YF +G
Sbjct: 700 EILVKAARSRNLEIKTDTAKSLAESLDQAESPTFPYLNTLLRILATRCMMQAVYFCSG-- 757
Query: 695 AEEEFHHYGLALDKYTHFTSPIRRYSDIVVHRLLMAAISKDKKMEIKGNLFSNKDLEELC 754
+ +FHHYGLA YTHFTSPIRRY+D++VHRLL AI D L L ++C
Sbjct: 758 MDNDFHHYGLASPIYTHFTSPIRRYADVIVHRLLAVAIGADCTYP---ELTDKHKLADIC 814
Query: 755 RHINNRNQAAQHSQKQSTELFQCMYFKDKDPATEERCISDGVIYSIRTNGVLLFIPRFGI 814
+++N R++ AQ++Q+ S ++FK K +EE I +R N +++ IP++G+
Sbjct: 815 KNLNFRHKMAQYAQRASVAFHTQLFFKSKGIVSEE-----AYILFVRKNAIVVLIPKYGL 869
Query: 815 KGAAYLKNKDGLVISCGPDSCSEWKPGSLQRFQNKITSTTTDGESVTFHLFDHVTVRISI 874
+G + + KD KP + ++I S E FH+FD V V+I +
Sbjct: 870 EGTVFFEEKD--------------KPNPQLIYDDEIPSLKI--EDTVFHVFDKVKVKIML 913
Query: 875 QASRCHSDTIRLEII 889
+S IR+ ++
Sbjct: 914 DSSNLQHQKIRMSLV 928
>gi|190014625 DIS3 mitotic control isoform b [Homo sapiens]
Length = 928
Score = 496 bits (1278), Expect = e-140
Identities = 317/873 (36%), Positives = 480/873 (54%), Gaps = 102/873 (11%)
Query: 43 YLPRERGESMEKWQTRSIYNAAVWYYHHCQ-----DRMPIVMVTED----EEAIQQYGSE 93
Y+ +E+GE+ R+I AA WY H + +++ ++ +T D E+AI+
Sbjct: 102 YVEQEQGENANDRNDRAIRVAAKWYNEHLKKMSADNQLQVIFITNDRRNKEKAIE----- 156
Query: 94 TEGVFVITFKNYLDNFWPDLKAAHELCDSILQSRRERENESQESHGKEYPEHLPLEVLEA 153
EG+ T + Y+ + L A EL D + + E ES + EHLPL L+
Sbjct: 157 -EGIPAFTCEEYVKS----LTANPELIDRL--ACLSEEGNEIESGKIIFSEHLPLSKLQQ 209
Query: 154 GIKSGRYIQGILNVNKHRAQIEAFVRLQGASSKDSDLVSDILIHGMKARNRSIHGDVVVV 213
GIKSG Y+QG ++ +EA V + G D++ +I++ G+K NR++H D+V V
Sbjct: 210 GIKSGTYLQGTFRASREN-YLEATVWIHG----DNEENKEIILQGLKHLNRAVHEDIVAV 264
Query: 214 ELLPKNEWKGRTVALCENDCDDKASGESPSEP-------------MPTGRVVGILQKNWR 260
ELLPK++W + + ++ ++ E E PTGRVVGI+++NWR
Sbjct: 265 ELLPKSQWVAPSSVVLHDEGQNEEDVEKEEETERMLKTAVSEKMLKPTGRVVGIIKRNWR 324
Query: 261 DYVVTFPSKEEVQSQGKNAQKILVTPWDYRIPKIRISTQQAETLQDFRVVVRIDSWESTS 320
Y SK ++ K +++ L TP D RIP+IRI T+QA TL+ R++V ID W S
Sbjct: 325 PYCGML-SKSDI----KESRRHLFTPADKRIPRIRIETRQASTLEGRRIIVAIDGWPRNS 379
Query: 321 VYPNGHFVRVLGRIGDLEGEIATILVENSISVIPFSEAQMCEMPVNTPESPWKVSPEEEQ 380
YPNGHFVR LG +G+ E E +L+E+ + PFS+A + +P + PW ++ ++ +
Sbjct: 380 RYPNGHFVRNLGDVGEKETETEVLLLEHDVPHQPFSQAVLSFLP----KMPWSITEKDMK 435
Query: 381 KRKDLRKSHL-VFSIDPKGCEDVDDTLSVRTLNNGNLELGVHIADVTHFVAPNSYIDIEA 439
R+DLR HL + S+DP GC D+DD L R L NGNLE+GVHIADV+HF+ P + +D E+
Sbjct: 436 NREDLR--HLCICSVDPPGCTDIDDALHCRELENGNLEVGVHIADVSHFIRPGNALDQES 493
Query: 440 RTRATTYYLADRRYDMLPSVLSADLCSLLGGVDRYAVSIMWELDKASYEIKKVWYGRTII 499
R TT YL ++R DM+P +LS++LCSL VDR A S +WE++ + EI K + +++I
Sbjct: 494 ARRGTTVYLCEKRIDMVPELLSSNLCSLKCDVDRLAFSCIWEMNH-NAEILKTKFTKSVI 552
Query: 500 RSAYKLFYEAAQELLDGNLSVVDDIPEFKDLDEKSRQAKLEELVWAIGKLTDIARHVRAK 559
S L Y AQ +D + ++ DDI ++ L +A+ ++ +
Sbjct: 553 NSKASLTYAEAQLRID-SANMNDDI------------------TTSLRGLNKLAKILKKR 593
Query: 560 RDGCGALELEGVEVCVQLDDKKNIHDLIPKQPLEVHET---VAECMILANHWVAKKIWES 616
R GAL L EV +D + HD I Q E+ ET V E M+LAN VAKKI E
Sbjct: 594 RIEKGALTLSSPEVRFHMDSE--THDPIDLQTKELRETNSMVEEFMLLANISVAKKIHEE 651
Query: 617 FPHQALLRQHPPPHQEFFSELRECAKAKGFFIDTRSNKTLADSLDNANDPHDPIVNRLLR 676
F ALLR+HP P + L + A+++ I T + K+LA+SLD A P P +N LLR
Sbjct: 652 FSEHALLRKHPAPPPSNYEILVKAARSRNLEIKTDTAKSLAESLDQAESPTFPYLNTLLR 711
Query: 677 SMATQAMSNALYFSTGSCAEEEFHHYGLALDKYTHFTSPIRRYSDIVVHRLLMAAISKDK 736
+AT+ M A+YF +G + +FHHYGLA YTHFTSPIRRY+D++VHRLL AI D
Sbjct: 712 ILATRCMMQAVYFCSG--MDNDFHHYGLASPIYTHFTSPIRRYADVIVHRLLAVAIGADC 769
Query: 737 KMEIKGNLFSNKDLEELCRHINNRNQAAQHSQKQSTELFQCMYFKDKDPATEERCISDGV 796
L L ++C+++N R++ AQ++Q+ S ++FK K +EE
Sbjct: 770 TYP---ELTDKHKLADICKNLNFRHKMAQYAQRASVAFHTQLFFKSKGIVSEE-----AY 821
Query: 797 IYSIRTNGVLLFIPRFGIKGAAYLKNKDGLVISCGPDSCSEWKPGSLQRFQNKITSTTTD 856
I +R N +++ IP++G++G + + KD KP + ++I S
Sbjct: 822 ILFVRKNAIVVLIPKYGLEGTVFFEEKD--------------KPNPQLIYDDEIPSLKI- 866
Query: 857 GESVTFHLFDHVTVRISIQASRCHSDTIRLEII 889
E FH+FD V V+I + +S IR+ ++
Sbjct: 867 -EDTVFHVFDKVKVKIMLDSSNLQHQKIRMSLV 898
>gi|134288890 DIS3 mitotic control homolog (S. cerevisiae)-like 2
[Homo sapiens]
Length = 885
Score = 284 bits (727), Expect = 2e-76
Identities = 225/746 (30%), Positives = 362/746 (48%), Gaps = 79/746 (10%)
Query: 131 ENESQESHGKEYPE-----HLPLEVLEAGIKSGRYIQGILNVNKHRAQIEAFVRLQGASS 185
+ E++ ++ + PE HLP + L++ S I +EA + G+ S
Sbjct: 130 DKETEAAYESDIPEELCGHHLPQQSLKSYNDSPDVI------------VEA--QFDGSDS 175
Query: 186 KDSD-LVSDILIHGMKARNRSIH------GDVVVVELLPKNEWKGRTVALCENDCDDKAS 238
+D + ++L+ G+K + + GD V K T + + D +A
Sbjct: 176 EDGHGITQNVLVDGVKKLSVCVSEKGREDGDAPVT--------KDETTCISQ---DTRAL 224
Query: 239 GESPSEPMPTGRVVGILQKNWRDYVVTFPSKEEVQSQGKNAQKILVTPWDYRIPKIRIST 298
E + + +VV IL+K F ++ + L +P D+R+P+I +
Sbjct: 225 SEKSLQR--SAKVVYILEKKHSRAATGFLKLLADKNSELFRKYALFSPSDHRVPRIYVPL 282
Query: 299 QQAETLQDFRV----------VVRIDSWESTSVYPNGHFVRVLGRIGDLEGEIATILVEN 348
+ QDF + RI W+ + G + LG+ G++E E IL E
Sbjct: 283 KDCP--QDFVARPKDYANTLFICRIVDWKEDCNFALGQLAKSLGQAGEIEPETEGILTEY 340
Query: 349 SISVIPFSEAQMCEMPVNTPESPWKVSPEEEQKRKDLRKSHLVFSIDPKGCEDVDDTLSV 408
+ FS + +P P W + PEE KR+DLRK +F+IDP D+DD LS
Sbjct: 341 GVDFSDFSSEVLECLPQGLP---WTIPPEEFSKRRDLRKD-CIFTIDPSTARDLDDALSC 396
Query: 409 RTLNNGNLELGVHIADVTHFVAPNSYIDIEARTRATTYYLADRRYDMLPSVLSADLCSLL 468
+ L +GN ++GVHIADV++FV S +D A RAT+ YL + MLP +L +LCSL
Sbjct: 397 KPLADGNFKVGVHIADVSYFVPEGSDLDKVAAERATSVYLVQKVVPMLPRLLCEELCSLN 456
Query: 469 GGVDRYAVSIMWELDKASYEIKKVWYGRTIIRSAYKLFYEAAQELLDGNLSVVDDIPEFK 528
D+ S++W L +I W+GRTIIRS KL YE AQ +++ S + IP K
Sbjct: 457 PMSDKLTFSVIWTLTPEG-KILDEWFGRTIIRSCTKLSYEHAQSMIE---SPTEKIPA-K 511
Query: 529 DLDEKSRQAKLEELVWAIGKLTDIARHVRAKRDGCGALELEGVEVCVQLDDKKNI-HDLI 587
+L S + EE+ A+ L IA+ +R +R GAL L+ +++ LD + +
Sbjct: 512 ELPPISPEHSSEEVHQAVLNLHGIAKQLRQQRFVDGALRLDQLKLAFTLDHETGLPQGCH 571
Query: 588 PKQPLEVHETVAECMILANHWVAKKIWESFPHQALLRQHPPPHQEFFSELRECAKAKGFF 647
+ E ++ V E M+LAN VA KI +FP QALLR+HPPP S+L E G
Sbjct: 572 IYEYRESNKLVEEFMLLANMAVAHKIHRAFPEQALLRRHPPPQTRMLSDLVEFCDQMGLP 631
Query: 648 IDTRSNKTLADSLDN--ANDPHDPIVNRLLRSMATQAMSNALYFSTGSCAE-EEFHHYGL 704
+D S L SL +D + +L +M ++ M ALYF +G + +F HY L
Sbjct: 632 VDFSSAGALNKSLTQTFGDDKYSLARKEVLTNMCSRPMQMALYFCSGLLQDPAQFRHYAL 691
Query: 705 ALDKYTHFTSPIRRYSDIVVHRLLMAAISKDKKMEIKGNLFSNKDLEELCRHINNRNQAA 764
+ YTHFTSPIRR++D++VHRLL AA+ +++++ + L++ H N+R A+
Sbjct: 692 NVPLYTHFTSPIRRFADVLVHRLLAAALGYRERLDM-----APDTLQKQADHCNDRRMAS 746
Query: 765 QHSQKQSTELFQCMYFKDKDPATEERCISDGVIYSIRTNGVLLFIPRFGIKGAAY----- 819
+ Q+ ST LF + K+ P S+ ++ I + + R+G++ Y
Sbjct: 747 KRVQELSTSLFFAVLVKESGPLE-----SEAMVMGILKQAFDVLVLRYGVQKRIYCNALA 801
Query: 820 LKNKDGLVISCGPDSCSEWKPGSLQR 845
L++ + P+ W+P +++
Sbjct: 802 LRSHHFQKVGKKPELTLVWEPEDMEQ 827
Score = 63.2 bits (152), Expect = 1e-09
Identities = 41/116 (35%), Positives = 69/116 (59%), Gaps = 13/116 (11%)
Query: 129 ERENESQESHGKE---YPEHLPLEVLEAGIKSGRYIQGILNVNKHRAQIEAFVRLQGASS 185
+++++++ + GK+ + ++ E + G+K G IQG+L +N + EAF+ S
Sbjct: 34 DKKSKNRSTRGKKKSIFETYMSKEDVSEGLKRGTLIQGVLRINPKKFH-EAFI-----PS 87
Query: 186 KDSDLVSDILIHGMKARNRSIHGDVVVVELLPKNEWKGRTVALCENDCDDKASGES 241
D D DI I G+ ARNR+++GD+VVV+LLP+ WK V ND + +A+ ES
Sbjct: 88 PDGD--RDIFIDGVVARNRALNGDLVVVKLLPEEHWK--VVKPESNDKETEAAYES 139
>gi|156105693 PPAR-alpha interacting complex protein 285 isoform 1
[Homo sapiens]
Length = 2649
Score = 130 bits (326), Expect = 8e-30
Identities = 154/633 (24%), Positives = 264/633 (41%), Gaps = 98/633 (15%)
Query: 194 ILIHGMKARNRSIHGDVVVVELL-----PKNEWKGRTVALCENDCDDKA-----SGESPS 243
I + G + GD V+V+LL P+ +GR + + + + A P
Sbjct: 1155 IQVRGRLDCGMAFAGDEVLVQLLSGDKAPEGRLRGRVLGVLKRKRHELAFVCRMDTWDPR 1214
Query: 244 EPMP-TGRVVGILQKNWRDYVVTFPSKEEVQSQGKNAQKILVTPWDYRIPKIRISTQQAE 302
+P G V I +D PS+ + S K R+ ++ + AE
Sbjct: 1215 IMVPINGSVTKIFVAELKD-----PSQVPIYSLRKG-----------RLQRVGLERLTAE 1258
Query: 303 TLQDFRVVVRIDSWESTSVYPNGHFVRVLGRIGDLEGEIATILVENSISVIPFSEAQMCE 362
V+I W YP G VL E + + +E S+ V P +A + +
Sbjct: 1259 ARHSRLFWVQIVLWRQGFYYPLGIVREVLPEASTWEQGLRILGLEYSLRVPPSDQATITK 1318
Query: 363 MPVNTPESPWKVSPEEEQKRKDLRKSHLVFSIDPKGCEDVDDTLSVRTLNNGNLELGVHI 422
+ +V+ E R + L F++DP+G ++DD LSVR L E+ VHI
Sbjct: 1319 VLQKYHTELGRVAGRREDCR-----AFLTFTVDPQGACNLDDALSVRDLGP-RCEVAVHI 1372
Query: 423 ADVTHFVAPNSYIDIEARTRATTYYLADRR-YDMLPSVLSADLCSLLGGVDRYAVSIMWE 481
DV FV + +D+EAR + +Y R MLP+ L D+ SLL G DR A+S+
Sbjct: 1373 TDVASFVPRDGVLDVEARRQGAAFYAPGREPVPMLPASLCQDVLSLLPGRDRLAISLFLT 1432
Query: 482 LDKASYEIKKVWYGRTIIRSAYKLFYEAAQELLDGNLSVVDDIPEFKDLDEKSRQAKLEE 541
++KAS ++K + + ++++S +L YE A+E++ + ++P +R ++
Sbjct: 1433 MEKASGQLKSLRFAPSVVQSDRQLSYEEAEEVIRQHPGAGRELP--------ARLDSVDA 1484
Query: 542 LVWAIGKLTDIARHVRAKRDGCGALELEGVEVCVQLDDKKNI-----HDLIPKQPLEVHE 596
V A + + R R + D C Q D+ + H ++ + ++ +
Sbjct: 1485 CVVAACYFSRLLRRHRLRSD-C---------FYEQPDEDGTLGFRAAHIMVKEYMIQFNR 1534
Query: 597 TVAECMI--LANHWVAKKIWESFPH----QALLRQH-------------------PPPHQ 631
VAE ++ V W+ P +AL +H PP
Sbjct: 1535 LVAEFLVGSECTRTVTPLRWQPAPRSQQLKALCEKHGDRVPLSLHLGHHLHGGGGSPPDT 1594
Query: 632 EFFSELRECAKAKGFFIDTRSNKTLADSLDNANDPHDPIVNRLLRSMATQAMSNALYFST 691
L K F T+ + + D L +D H P + R + +A
Sbjct: 1595 RLHL-LASLWKQVQFAARTQDYEQMVD-LVTTDDMH-PFLAPAGRDLRKALERSAF---- 1647
Query: 692 GSCA---EEEFHHYGLALDKYTHFTSPIRRYSDIVVHRLLMAAISKDKKMEIKGNLFSNK 748
G CA +++ HY L +D YT TSPIRRY D+V+ R ++ A+ G+ +S +
Sbjct: 1648 GRCARGHQQQGGHYSLQVDWYTWATSPIRRYLDVVLQRQILLALGHG------GSAYSAR 1701
Query: 749 DLEELCRHINNRNQAAQHSQKQSTELFQCMYFK 781
D++ LC+ + ++ AQ Q+++ L + K
Sbjct: 1702 DIDGLCQAFSLQHALAQSYQRRARSLHLAVQLK 1734
>gi|156105695 PPAR-alpha interacting complex protein 285 isoform 2
[Homo sapiens]
Length = 2080
Score = 130 bits (326), Expect = 8e-30
Identities = 154/633 (24%), Positives = 264/633 (41%), Gaps = 98/633 (15%)
Query: 194 ILIHGMKARNRSIHGDVVVVELL-----PKNEWKGRTVALCENDCDDKA-----SGESPS 243
I + G + GD V+V+LL P+ +GR + + + + A P
Sbjct: 586 IQVRGRLDCGMAFAGDEVLVQLLSGDKAPEGRLRGRVLGVLKRKRHELAFVCRMDTWDPR 645
Query: 244 EPMP-TGRVVGILQKNWRDYVVTFPSKEEVQSQGKNAQKILVTPWDYRIPKIRISTQQAE 302
+P G V I +D PS+ + S K R+ ++ + AE
Sbjct: 646 IMVPINGSVTKIFVAELKD-----PSQVPIYSLRKG-----------RLQRVGLERLTAE 689
Query: 303 TLQDFRVVVRIDSWESTSVYPNGHFVRVLGRIGDLEGEIATILVENSISVIPFSEAQMCE 362
V+I W YP G VL E + + +E S+ V P +A + +
Sbjct: 690 ARHSRLFWVQIVLWRQGFYYPLGIVREVLPEASTWEQGLRILGLEYSLRVPPSDQATITK 749
Query: 363 MPVNTPESPWKVSPEEEQKRKDLRKSHLVFSIDPKGCEDVDDTLSVRTLNNGNLELGVHI 422
+ +V+ E R + L F++DP+G ++DD LSVR L E+ VHI
Sbjct: 750 VLQKYHTELGRVAGRREDCR-----AFLTFTVDPQGACNLDDALSVRDLGP-RCEVAVHI 803
Query: 423 ADVTHFVAPNSYIDIEARTRATTYYLADRR-YDMLPSVLSADLCSLLGGVDRYAVSIMWE 481
DV FV + +D+EAR + +Y R MLP+ L D+ SLL G DR A+S+
Sbjct: 804 TDVASFVPRDGVLDVEARRQGAAFYAPGREPVPMLPASLCQDVLSLLPGRDRLAISLFLT 863
Query: 482 LDKASYEIKKVWYGRTIIRSAYKLFYEAAQELLDGNLSVVDDIPEFKDLDEKSRQAKLEE 541
++KAS ++K + + ++++S +L YE A+E++ + ++P +R ++
Sbjct: 864 MEKASGQLKSLRFAPSVVQSDRQLSYEEAEEVIRQHPGAGRELP--------ARLDSVDA 915
Query: 542 LVWAIGKLTDIARHVRAKRDGCGALELEGVEVCVQLDDKKNI-----HDLIPKQPLEVHE 596
V A + + R R + D C Q D+ + H ++ + ++ +
Sbjct: 916 CVVAACYFSRLLRRHRLRSD-C---------FYEQPDEDGTLGFRAAHIMVKEYMIQFNR 965
Query: 597 TVAECMI--LANHWVAKKIWESFPH----QALLRQH-------------------PPPHQ 631
VAE ++ V W+ P +AL +H PP
Sbjct: 966 LVAEFLVGSECTRTVTPLRWQPAPRSQQLKALCEKHGDRVPLSLHLGHHLHGGGGSPPDT 1025
Query: 632 EFFSELRECAKAKGFFIDTRSNKTLADSLDNANDPHDPIVNRLLRSMATQAMSNALYFST 691
L K F T+ + + D L +D H P + R + +A
Sbjct: 1026 RLHL-LASLWKQVQFAARTQDYEQMVD-LVTTDDMH-PFLAPAGRDLRKALERSAF---- 1078
Query: 692 GSCA---EEEFHHYGLALDKYTHFTSPIRRYSDIVVHRLLMAAISKDKKMEIKGNLFSNK 748
G CA +++ HY L +D YT TSPIRRY D+V+ R ++ A+ G+ +S +
Sbjct: 1079 GRCARGHQQQGGHYSLQVDWYTWATSPIRRYLDVVLQRQILLALGHG------GSAYSAR 1132
Query: 749 DLEELCRHINNRNQAAQHSQKQSTELFQCMYFK 781
D++ LC+ + ++ AQ Q+++ L + K
Sbjct: 1133 DIDGLCQAFSLQHALAQSYQRRARSLHLAVQLK 1165
>gi|224809295 xeroderma pigmentosum, complementation group C isoform
1 [Homo sapiens]
Length = 940
Score = 32.3 bits (72), Expect = 2.2
Identities = 31/113 (27%), Positives = 44/113 (38%), Gaps = 2/113 (1%)
Query: 106 LDNFWPDLKAAHELCDSILQSRRERENESQESHGKEYPEHLPLEVLEAGIKSGRYIQGIL 165
L +F DLK AH L + E E + + E E L VL +S + + +L
Sbjct: 99 LRDFPSDLKKAHHLKRGATMNEDSNEEEEESENDWEEVEELSEPVLGDVRESTAFSRSLL 158
Query: 166 NVNKHRAQIEA--FVRLQGASSKDSDLVSDILIHGMKARNRSIHGDVVVVELL 216
V +IE + + S K L MK N+ +H D V LL
Sbjct: 159 PVKPVEIEIETPEQAKTRERSEKIKLEFETYLRRAMKRFNKGVHEDTHKVHLL 211
>gi|239740946 PREDICTED: hypothetical protein XP_002344104 isoform 1
[Homo sapiens]
Length = 430
Score = 32.0 bits (71), Expect = 2.9
Identities = 39/160 (24%), Positives = 63/160 (39%), Gaps = 30/160 (18%)
Query: 705 ALDKYTHFTSPIRRYSDIV-----VHRLLMAAISKDKKMEIKGNLFSNKDLEELCRHINN 759
ALD T T+ +RR +DI + + L +K + I+ L LE+ + N
Sbjct: 277 ALDSDTRITALLRRQADIESRARRLQKRLQVVQAKQVERHIQHQL--GGFLEKTLSKLPN 334
Query: 760 RNQAAQHSQKQSTELFQCMYFKDKDPATEERCISDGVIYSIRTNGVLLFIPRFGIKGAAY 819
SQ T + K A E S+G+ +++N + + RF G A
Sbjct: 335 LESLRPRSQLMLTRKAEAALRK----AASETTTSEGLSNFLKSNSISEELERFTASGIAN 390
Query: 820 LKNKDGLVISCGPDSCSEWKPGSLQRFQNKITSTTTDGES 859
L+ CSE Q F + +T +++ GES
Sbjct: 391 LR-------------CSE------QAFDSDVTDSSSGGES 411
>gi|239740944 PREDICTED: hypothetical protein XP_002344105 isoform 2
[Homo sapiens]
Length = 430
Score = 32.0 bits (71), Expect = 2.9
Identities = 39/160 (24%), Positives = 63/160 (39%), Gaps = 30/160 (18%)
Query: 705 ALDKYTHFTSPIRRYSDIV-----VHRLLMAAISKDKKMEIKGNLFSNKDLEELCRHINN 759
ALD T T+ +RR +DI + + L +K + I+ L LE+ + N
Sbjct: 277 ALDSDTRITALLRRQADIESRARRLQKRLQVVQAKQVERHIQHQL--GGFLEKTLSKLPN 334
Query: 760 RNQAAQHSQKQSTELFQCMYFKDKDPATEERCISDGVIYSIRTNGVLLFIPRFGIKGAAY 819
SQ T + K A E S+G+ +++N + + RF G A
Sbjct: 335 LESLRPRSQLMLTRKAEAALRK----AASETTTSEGLSNFLKSNSISEELERFTASGIAN 390
Query: 820 LKNKDGLVISCGPDSCSEWKPGSLQRFQNKITSTTTDGES 859
L+ CSE Q F + +T +++ GES
Sbjct: 391 LR-------------CSE------QAFDSDVTDSSSGGES 411
>gi|239740942 PREDICTED: hypothetical protein XP_002344106 isoform 3
[Homo sapiens]
Length = 430
Score = 32.0 bits (71), Expect = 2.9
Identities = 39/160 (24%), Positives = 63/160 (39%), Gaps = 30/160 (18%)
Query: 705 ALDKYTHFTSPIRRYSDIV-----VHRLLMAAISKDKKMEIKGNLFSNKDLEELCRHINN 759
ALD T T+ +RR +DI + + L +K + I+ L LE+ + N
Sbjct: 277 ALDSDTRITALLRRQADIESRARRLQKRLQVVQAKQVERHIQHQL--GGFLEKTLSKLPN 334
Query: 760 RNQAAQHSQKQSTELFQCMYFKDKDPATEERCISDGVIYSIRTNGVLLFIPRFGIKGAAY 819
SQ T + K A E S+G+ +++N + + RF G A
Sbjct: 335 LESLRPRSQLMLTRKAEAALRK----AASETTTSEGLSNFLKSNSISEELERFTASGIAN 390
Query: 820 LKNKDGLVISCGPDSCSEWKPGSLQRFQNKITSTTTDGES 859
L+ CSE Q F + +T +++ GES
Sbjct: 391 LR-------------CSE------QAFDSDVTDSSSGGES 411
>gi|32698714 hypothetical protein LOC284058 [Homo sapiens]
Length = 1105
Score = 32.0 bits (71), Expect = 2.9
Identities = 39/160 (24%), Positives = 63/160 (39%), Gaps = 30/160 (18%)
Query: 705 ALDKYTHFTSPIRRYSDIV-----VHRLLMAAISKDKKMEIKGNLFSNKDLEELCRHINN 759
ALD T T+ +RR +DI + + L +K + I+ L LE+ + N
Sbjct: 277 ALDSDTRITALLRRQADIESRARRLQKRLQVVQAKQVERHIQHQL--GGFLEKTLSKLPN 334
Query: 760 RNQAAQHSQKQSTELFQCMYFKDKDPATEERCISDGVIYSIRTNGVLLFIPRFGIKGAAY 819
SQ T + K A E S+G+ +++N + + RF G A
Sbjct: 335 LESLRPRSQLMLTRKAEAALRK----AASETTTSEGLSNFLKSNSISEELERFTASGIAN 390
Query: 820 LKNKDGLVISCGPDSCSEWKPGSLQRFQNKITSTTTDGES 859
L+ CSE Q F + +T +++ GES
Sbjct: 391 LR-------------CSE------QAFDSDVTDSSSGGES 411
>gi|126032345 sterile alpha motif domain containing 3 isoform b
[Homo sapiens]
Length = 221
Score = 31.6 bits (70), Expect = 3.8
Identities = 35/145 (24%), Positives = 63/145 (43%), Gaps = 19/145 (13%)
Query: 39 QQCCYLPRER-GESMEKWQTRSIYNAAVWYYHHCQDRMPIVMVTEDE------EAIQQYG 91
Q C +L + GE + ++Q + AA+ + DRM +V + + I++Y
Sbjct: 8 QVCSWLVEKNLGELVHRFQEEEVSGAALLALN---DRMVQQLVKKIGHQAVLMDLIKKYK 64
Query: 92 SETEGVFVITFKNYLDNFWPDLKAAHELCDSILQSRRERENESQESHGKEYPEHLPLEVL 151
T+G L + KAA + + R+ E+ S HG++ P P E L
Sbjct: 65 QNTQG---------LKSPENPKKAALVMQTEAARDYRDEESSSPARHGEQMPSFYPAENL 115
Query: 152 EAGIKSGRYIQGILNVNKHRAQIEA 176
+ G+ R ++ NV + A+ +A
Sbjct: 116 DNGLIDQRVLKQRRNVKQILARSKA 140
>gi|126032305 sterile alpha motif domain containing 3 isoform a
[Homo sapiens]
Length = 520
Score = 31.6 bits (70), Expect = 3.8
Identities = 35/145 (24%), Positives = 63/145 (43%), Gaps = 19/145 (13%)
Query: 39 QQCCYLPRER-GESMEKWQTRSIYNAAVWYYHHCQDRMPIVMVTEDE------EAIQQYG 91
Q C +L + GE + ++Q + AA+ + DRM +V + + I++Y
Sbjct: 8 QVCSWLVEKNLGELVHRFQEEEVSGAALLALN---DRMVQQLVKKIGHQAVLMDLIKKYK 64
Query: 92 SETEGVFVITFKNYLDNFWPDLKAAHELCDSILQSRRERENESQESHGKEYPEHLPLEVL 151
T+G L + KAA + + R+ E+ S HG++ P P E L
Sbjct: 65 QNTQG---------LKSPENPKKAALVMQTEAARDYRDEESSSPARHGEQMPSFYPAENL 115
Query: 152 EAGIKSGRYIQGILNVNKHRAQIEA 176
+ G+ R ++ NV + A+ +A
Sbjct: 116 DNGLIDQRVLKQRRNVKQILARSKA 140
>gi|165905601 proline-serine-threonine phosphatase interacting
protein 2 [Homo sapiens]
Length = 334
Score = 31.2 bits (69), Expect = 4.9
Identities = 18/54 (33%), Positives = 27/54 (50%), Gaps = 5/54 (9%)
Query: 727 LLMAAISKDKKMEIKGNLFSNKDLEELCRHINNRNQAAQHS-----QKQSTELF 775
L+M AI K K ++ K + + K+ E+ CR + QA S KQ +LF
Sbjct: 121 LIMDAIHKQKSLQFKKTMDAKKNYEQKCRDKDEAEQAVSRSANLVNPKQQEKLF 174
>gi|50897852 coiled-coil domain containing 88A isoform 2 [Homo
sapiens]
Length = 1843
Score = 30.8 bits (68), Expect = 6.4
Identities = 31/154 (20%), Positives = 66/154 (42%), Gaps = 20/154 (12%)
Query: 821 KNKDGLVISCGPDSCSEWKPGSLQRFQNKITSTTTDGESVTFHL-----------FDHVT 869
K L I+C E + L+R K+ T +++TF L +++
Sbjct: 646 KKITNLKITCEKIEALEQENSELERENRKLKKTLDSFKNLTFQLESLEKENSQLDEENLE 705
Query: 870 VRISIQASRCHSDTIRLEIISNKPYKIPNTELIHQSSPLLKS-ELVKEVTKSVEEAQLAQ 928
+R ++++ +C S + ++ N EL + L K EL+K K E +++
Sbjct: 706 LRRNVESLKCAS-------MKMAQLQLENKELESEKEQLKKGLELLKASFKKTERLEVSY 758
Query: 929 EVKVNIIQEEYQEYRQTKGRSLYTLLEEIRDLAL 962
+ ++I + Q+ + + + L E++DL +
Sbjct: 759 Q-GLDIENQRLQKTLENSNKKIQQLESELQDLEM 791
>gi|208022632 coiled-coil domain containing 88A isoform 1 [Homo
sapiens]
Length = 1870
Score = 30.8 bits (68), Expect = 6.4
Identities = 31/154 (20%), Positives = 66/154 (42%), Gaps = 20/154 (12%)
Query: 821 KNKDGLVISCGPDSCSEWKPGSLQRFQNKITSTTTDGESVTFHL-----------FDHVT 869
K L I+C E + L+R K+ T +++TF L +++
Sbjct: 646 KKITNLKITCEKIEALEQENSELERENRKLKKTLDSFKNLTFQLESLEKENSQLDEENLE 705
Query: 870 VRISIQASRCHSDTIRLEIISNKPYKIPNTELIHQSSPLLKS-ELVKEVTKSVEEAQLAQ 928
+R ++++ +C S + ++ N EL + L K EL+K K E +++
Sbjct: 706 LRRNVESLKCAS-------MKMAQLQLENKELESEKEQLKKGLELLKASFKKTERLEVSY 758
Query: 929 EVKVNIIQEEYQEYRQTKGRSLYTLLEEIRDLAL 962
+ ++I + Q+ + + + L E++DL +
Sbjct: 759 Q-GLDIENQRLQKTLENSNKKIQQLESELQDLEM 791
>gi|4503509 eukaryotic translation initiation factor 3, subunit 10
theta, 150/170kDa [Homo sapiens]
Length = 1382
Score = 30.4 bits (67), Expect = 8.4
Identities = 18/78 (23%), Positives = 36/78 (46%)
Query: 885 RLEIISNKPYKIPNTELIHQSSPLLKSELVKEVTKSVEEAQLAQEVKVNIIQEEYQEYRQ 944
R + I + ++ + + + L + E + + EE +L QE K + QE+ Q
Sbjct: 571 RRQTIEERKERLESLNIQREKEELEQREAELQKVRKAEEERLRQEAKEREKERILQEHEQ 630
Query: 945 TKGRSLYTLLEEIRDLAL 962
K +++ LE+I+ L
Sbjct: 631 IKKKTVRERLEQIKKTEL 648
>gi|189011592 amyotrophic lateral sclerosis 2 (juvenile) chromosome
region, candidate 12 isoform b [Homo sapiens]
Length = 422
Score = 30.4 bits (67), Expect = 8.4
Identities = 36/145 (24%), Positives = 61/145 (42%), Gaps = 7/145 (4%)
Query: 481 ELDKASYEIKKVWYGRTIIRSAYKLFYEAAQELLDGNLSVVDDIPEFKDLDEKSRQAKLE 540
E +K+ YE+ V G ++R+ ++ E+ D +IP D SR +
Sbjct: 72 ETNKSFYEVINVSPGYQLVRNREQISVTLGDEMFDRKKRWESEIP---DKGRFSRTNIIS 128
Query: 541 ELVWAIGKLTDIARHVRAKRDGCGALELEGVEVCVQLDDKKNIHDLIPKQPLEVHETVAE 600
+L I +LT I + RD A +L E+ ++ + K + ++ E HE AE
Sbjct: 129 DLEEQISELTAIIEQM--NRDHQSAQKLLSSEMDLRCAEMKQNFENKNRELKEAHE--AE 184
Query: 601 CMILANHWVAKKIWESFPHQALLRQ 625
L N++ A E Q L +
Sbjct: 185 LSELENNYKAALKAEKLAAQEKLEE 209
>gi|189011586 amyotrophic lateral sclerosis 2 (juvenile) chromosome
region, candidate 12 isoform a [Homo sapiens]
Length = 445
Score = 30.4 bits (67), Expect = 8.4
Identities = 36/145 (24%), Positives = 61/145 (42%), Gaps = 7/145 (4%)
Query: 481 ELDKASYEIKKVWYGRTIIRSAYKLFYEAAQELLDGNLSVVDDIPEFKDLDEKSRQAKLE 540
E +K+ YE+ V G ++R+ ++ E+ D +IP D SR +
Sbjct: 72 ETNKSFYEVINVSPGYQLVRNREQISVTLGDEMFDRKKRWESEIP---DKGRFSRTNIIS 128
Query: 541 ELVWAIGKLTDIARHVRAKRDGCGALELEGVEVCVQLDDKKNIHDLIPKQPLEVHETVAE 600
+L I +LT I + RD A +L E+ ++ + K + ++ E HE AE
Sbjct: 129 DLEEQISELTAIIEQM--NRDHQSAQKLLSSEMDLRCAEMKQNFENKNRELKEAHE--AE 184
Query: 601 CMILANHWVAKKIWESFPHQALLRQ 625
L N++ A E Q L +
Sbjct: 185 LSELENNYKAALKAEKLAAQEKLEE 209
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.318 0.134 0.398
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 36,491,174
Number of Sequences: 37866
Number of extensions: 1616326
Number of successful extensions: 4588
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 10
Number of HSP's that attempted gapping in prelim test: 4533
Number of HSP's gapped (non-prelim): 31
length of query: 971
length of database: 18,247,518
effective HSP length: 112
effective length of query: 859
effective length of database: 14,006,526
effective search space: 12031605834
effective search space used: 12031605834
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 67 (30.4 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.