Guide to the Human Genome
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Name: SULF1 Sequence: fasta or formatted (871aa) NCBI GI: 189571638
Description:

sulfatase 1

Referenced in:

Phosphatases and Sulfatases

Other entries for this name:
alt mRNA [871aa] sulfatase 1
alt mRNA [871aa] sulfatase 1
alt mRNA [871aa] sulfatase 1
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             3.9         34           2
 C cysteine            2.9         25           2
 D aspartate           4.6         40           2
 E glutamate           6.7         58           5
 F phenylalanine       3.9         34           2
 G glycine             6.2         54           2
 H histidine           3.6         31           1
 I isoleucine          4.5         39           2
 K lysine              7.6         66           2
 L leucine             8.0         70           2
 M methionine          2.3         20           2
 N asparagine          6.2         54           3
 P proline             5.2         45           2
 Q glutamine           4.9         43           2
 R arginine            7.3         64           3
 S serine              6.4         56           2
 T threonine           5.5         48           2
 V valine              4.6         40           1
 W tryptophan          1.4         12           1
 Y tyrosine            4.4         38           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   sulfatase 1 
SULF1                 1.000   sulfatase 1 
SULF1                 1.000   sulfatase 1 
SULF1                 1.000   sulfatase 1 
SULF2                 0.660   sulfatase 2 isoform a precursor 
SULF2                 0.660   sulfatase 2 isoform a precursor 
SULF2                 0.656   sulfatase 2 isoform b precursor 
GNS                   0.159   glucosamine (N-acetyl)-6-sulfatase precursor 
ARSK                  0.037   arylsulfatase K 
IDS                   0.029   iduronate-2-sulfatase isoform a precursor 
GALNS                 0.024   galactosamine (N-acetyl)-6-sulfate sulfatase precurso...
ARSJ                  0.022   arylsulfatase J 
ARSI                  0.020   arylsulfatase family, member I 
IDS                   0.020   iduronate-2-sulfatase isoform b precursor 
SGSH                  0.018   N-sulfoglucosamine sulfohydrolase precursor 
STS                   0.017   steryl-sulfatase precursor 
ARSB                  0.017   arylsulfatase B isoform 2 precursor 
ARSB                  0.017   arylsulfatase B isoform 1 precursor 
ARSF                  0.014   arylsulfatase F precursor 
ARSD                  0.013   arylsulfatase D isoform a precursor 
ARSG                  0.013   Arylsulfatase G 
TCHH                  0.012   trichohyalin 
ARSH                  0.012   arylsulfatase family, member H 
ARSE                  0.012   arylsulfatase E precursor 
ARSA                  0.012   arylsulfatase A isoform a precursor 
ARSA                  0.012   arylsulfatase A isoform a precursor 
ARSA                  0.012   arylsulfatase A isoform b 
ARSA                  0.012   arylsulfatase A isoform a precursor 
ARSA                  0.012   arylsulfatase A isoform a precursor 
LOC100294088          0.009   PREDICTED: hypothetical protein, partial 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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