Guide to the Human Genome
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Name: ARSA Sequence: fasta or formatted (423aa) NCBI GI: 146229327
Description:

arylsulfatase A isoform b

Referenced in:

Phosphatases and Sulfatases

Other entries for this name:
alt prot [507aa] arylsulfatase A isoform a precursor
alt prot [507aa] arylsulfatase A isoform a precursor
alt prot [507aa] arylsulfatase A isoform a precursor
alt prot [507aa] arylsulfatase A isoform a precursor
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine            10.4         44           2
 C cysteine            3.1         13           2
 D aspartate           5.0         21           1
 E glutamate           4.5         19           2
 F phenylalanine       4.5         19           2
 G glycine            11.3         48           2
 H histidine           4.0         17           2
 I isoleucine          1.4          6           1
 K lysine              1.9          8           1
 L leucine            12.5         53           3
 M methionine          2.1          9           1
 N asparagine          1.4          6           1
 P proline             9.9         42           2
 Q glutamine           4.0         17           1
 R arginine            4.0         17           1
 S serine              5.7         24           3
 T threonine           5.7         24           2
 V valine              4.7         20           1
 W tryptophan          0.7          3           1
 Y tyrosine            3.1         13           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   arylsulfatase A isoform b 
ARSA                  1.000   arylsulfatase A isoform a precursor 
ARSA                  1.000   arylsulfatase A isoform a precursor 
ARSA                  1.000   arylsulfatase A isoform a precursor 
ARSA                  1.000   arylsulfatase A isoform a precursor 
ARSG                  0.200   Arylsulfatase G 
GALNS                 0.181   galactosamine (N-acetyl)-6-sulfate sulfatase precurso...
ARSE                  0.148   arylsulfatase E precursor 
STS                   0.142   steryl-sulfatase precursor 
ARSF                  0.139   arylsulfatase F precursor 
ARSH                  0.113   arylsulfatase family, member H 
ARSD                  0.101   arylsulfatase D isoform a precursor 
ARSI                  0.079   arylsulfatase family, member I 
ARSB                  0.068   arylsulfatase B isoform 1 precursor 
ARSJ                  0.067   arylsulfatase J 
ARSB                  0.066   arylsulfatase B isoform 2 precursor 
ARSK                  0.048   arylsulfatase K 
SGSH                  0.034   N-sulfoglucosamine sulfohydrolase precursor 
GNS                   0.032   glucosamine (N-acetyl)-6-sulfatase precursor 
ARSD                  0.028   arylsulfatase D isoform b precursor 
SULF2                 0.027   sulfatase 2 isoform a precursor 
SULF2                 0.027   sulfatase 2 isoform b precursor 
SULF2                 0.027   sulfatase 2 isoform a precursor 
SULF1                 0.024   sulfatase 1 
SULF1                 0.024   sulfatase 1 
SULF1                 0.024   sulfatase 1 
SULF1                 0.024   sulfatase 1 
IDS                   0.016   iduronate-2-sulfatase isoform a precursor 
C9orf169              0.016   hypothetical protein LOC375791 
ENPP2                 0.013   autotaxin isoform 3 preproprotein 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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