Guide to the Human Genome
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Name: GNS Sequence: fasta or formatted (552aa) NCBI GI: 4504061
Description:

glucosamine (N-acetyl)-6-sulfatase precursor

Referenced in:

Lysosomes and Related Organelles
Phosphatases and Sulfatases

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.6         31           2
 C cysteine            2.5         14           2
 D aspartate           5.3         29           2
 E glutamate           3.6         20           1
 F phenylalanine       4.5         25           2
 G glycine             7.1         39           2
 H histidine           2.0         11           2
 I isoleucine          3.6         20           1
 K lysine              4.9         27           2
 L leucine            11.2         62           4
 M methionine          2.9         16           2
 N asparagine          6.3         35           2
 P proline             6.7         37           1
 Q glutamine           3.6         20           1
 R arginine            5.3         29           2
 S serine              6.7         37           2
 T threonine           6.3         35           1
 V valine              5.6         31           2
 W tryptophan          1.4          8           1
 Y tyrosine            4.7         26           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   glucosamine (N-acetyl)-6-sulfatase precursor 
SULF2                 0.256   sulfatase 2 isoform a precursor 
SULF2                 0.256   sulfatase 2 isoform b precursor 
SULF2                 0.256   sulfatase 2 isoform a precursor 
SULF1                 0.256   sulfatase 1 
SULF1                 0.256   sulfatase 1 
SULF1                 0.256   sulfatase 1 
SULF1                 0.256   sulfatase 1 
GALNS                 0.046   galactosamine (N-acetyl)-6-sulfate sulfatase precurso...
ARSA                  0.042   arylsulfatase A isoform a precursor 
ARSA                  0.042   arylsulfatase A isoform a precursor 
ARSA                  0.042   arylsulfatase A isoform a precursor 
ARSA                  0.042   arylsulfatase A isoform a precursor 
ARSI                  0.036   arylsulfatase family, member I 
SGSH                  0.036   N-sulfoglucosamine sulfohydrolase precursor 
ARSJ                  0.036   arylsulfatase J 
ARSK                  0.036   arylsulfatase K 
STS                   0.032   steryl-sulfatase precursor 
IDS                   0.027   iduronate-2-sulfatase isoform a precursor 
ARSG                  0.026   Arylsulfatase G 
ARSA                  0.025   arylsulfatase A isoform b 
ARSB                  0.024   arylsulfatase B isoform 2 precursor 
ARSB                  0.024   arylsulfatase B isoform 1 precursor 
IDS                   0.021   iduronate-2-sulfatase isoform b precursor 
ARSF                  0.020   arylsulfatase F precursor 
ARSE                  0.017   arylsulfatase E precursor 
ARSD                  0.017   arylsulfatase D isoform a precursor 
ARSD                  0.014   arylsulfatase D isoform b precursor 
ARSH                  0.012   arylsulfatase family, member H 
LOC727913             0.007   PREDICTED: similar to iduronate 2-sulfatase (Hunter...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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