Guide to the Human Genome
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Name: PSAT1 Sequence: fasta or formatted (370aa) NCBI GI: 17402893
Description:

phosphoserine aminotransferase 1 isoform 1

Referenced in:

Amino Acid Biosynthesis and Selected Derivatives

Other entries for this name:
alt prot [324aa] phosphoserine aminotransferase 1 isoform 2
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             8.1         30           3
 C cysteine            1.9          7           1
 D aspartate           4.9         18           2
 E glutamate           5.1         19           2
 F phenylalanine       4.6         17           1
 G glycine             8.1         30           3
 H histidine           1.6          6           1
 I isoleucine          5.9         22           2
 K lysine              7.3         27           2
 L leucine             9.5         35           2
 M methionine          2.4          9           1
 N asparagine          5.9         22           2
 P proline             4.9         18           2
 Q glutamine           3.0         11           1
 R arginine            3.0         11           1
 S serine              7.3         27           2
 T threonine           2.7         10           1
 V valine              9.5         35           2
 W tryptophan          0.8          3           1
 Y tyrosine            3.5         13           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   phosphoserine aminotransferase 1 isoform 1 
PSAT1                 0.841   phosphoserine aminotransferase 1 isoform 2 
LOC100129162          0.138   PREDICTED: similar to hCG1644578 
LOC100129162          0.135   PREDICTED: similar to hCG1644578 
ARHGAP17              0.006   nadrin isoform 1 
ARHGAP17              0.006   nadrin isoform 2 
ASAP3                 0.006   ArfGAP with SH3 domain, ankyrin repeat and PH domai...
ASAP3                 0.006   ArfGAP with SH3 domain, ankyrin repeat and PH domain...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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