Search of human proteins with 169215116

Search of human proteins with 169215116

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|169215116 PREDICTED: hypothetical protein [Homo sapiens]
         (194 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|169214889 PREDICTED: similar to hCG1790590 [Homo sapiens]          395   e-111
gi|169215116 PREDICTED: hypothetical protein [Homo sapiens]           395   e-111
gi|169214611 PREDICTED: similar to hCG1790590 [Homo sapiens]          395   e-111
gi|218749848 family with sequence similarity 38, member A [Homo ...   107   8e-24
gi|13384602 hypothetical protein LOC63895 [Homo sapiens]               94   9e-20
gi|9506663 ring finger protein 186 [Homo sapiens]                      35   0.052
gi|61835172 fragile X mental retardation-related protein 1 isofo...    31   0.58 
gi|61835164 fragile X mental retardation-related protein 1 isofo...    31   0.58 
gi|61835148 fragile X mental retardation-related protein 1 isofo...    31   0.58 
gi|239755810 PREDICTED: hypothetical protein [Homo sapiens]            30   0.99 
gi|239750310 PREDICTED: hypothetical protein [Homo sapiens]            30   0.99 
gi|239744621 PREDICTED: hypothetical protein [Homo sapiens]            30   0.99 
gi|59891448 rapamycin-insensitive companion of mTOR [Homo sapiens]     29   2.2  
gi|163644325 MCF.2 cell line derived transforming sequence-like ...    29   2.9  
gi|163644323 MCF.2 cell line derived transforming sequence-like ...    29   2.9  
gi|114431246 keratin 25D [Homo sapiens]                                28   3.7  
gi|239756779 PREDICTED: similar to hCG1643102 [Homo sapiens]           28   3.7  
gi|239746599 PREDICTED: hypothetical protein XP_002343795 [Homo ...    28   3.7  
gi|239745753 PREDICTED: hypothetical protein XP_002343545 [Homo ...    28   3.7  
gi|5031795 inhibin beta C chain preproprotein [Homo sapiens]           28   3.7  
gi|134142817 es1 protein isoform Ib precursor [Homo sapiens]           28   6.4  
gi|21389395 hypothetical protein LOC123970 [Homo sapiens]              28   6.4  
gi|157743267 ankyrin repeat domain 58 [Homo sapiens]                   27   8.4  

>gi|169214889 PREDICTED: similar to hCG1790590 [Homo sapiens]
          Length = 194

 Score =  395 bits (1016), Expect = e-111
 Identities = 194/194 (100%), Positives = 194/194 (100%)

Query: 1   MRSGNDCGRRAFVYTEDTQASTTRVLNSETAVPSKGLVSLQLPRLIDETVGRHFTCALKR 60
           MRSGNDCGRRAFVYTEDTQASTTRVLNSETAVPSKGLVSLQLPRLIDETVGRHFTCALKR
Sbjct: 1   MRSGNDCGRRAFVYTEDTQASTTRVLNSETAVPSKGLVSLQLPRLIDETVGRHFTCALKR 60

Query: 61  KTTRLPGGPVCGHSAAVGIGGQKGGASNICCMEPALHPWGLAGPLVTISSGNVTNILILT 120
           KTTRLPGGPVCGHSAAVGIGGQKGGASNICCMEPALHPWGLAGPLVTISSGNVTNILILT
Sbjct: 61  KTTRLPGGPVCGHSAAVGIGGQKGGASNICCMEPALHPWGLAGPLVTISSGNVTNILILT 120

Query: 121 VAAGVKGLGTCFFSEISHSITLEELPCRDHILKLCQDIFLACETHELELEEELSAKLIFL 180
           VAAGVKGLGTCFFSEISHSITLEELPCRDHILKLCQDIFLACETHELELEEELSAKLIFL
Sbjct: 121 VAAGVKGLGTCFFSEISHSITLEELPCRDHILKLCQDIFLACETHELELEEELSAKLIFL 180

Query: 181 YRSLETMIKWTREE 194
           YRSLETMIKWTREE
Sbjct: 181 YRSLETMIKWTREE 194


>gi|169215116 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 194

 Score =  395 bits (1016), Expect = e-111
 Identities = 194/194 (100%), Positives = 194/194 (100%)

Query: 1   MRSGNDCGRRAFVYTEDTQASTTRVLNSETAVPSKGLVSLQLPRLIDETVGRHFTCALKR 60
           MRSGNDCGRRAFVYTEDTQASTTRVLNSETAVPSKGLVSLQLPRLIDETVGRHFTCALKR
Sbjct: 1   MRSGNDCGRRAFVYTEDTQASTTRVLNSETAVPSKGLVSLQLPRLIDETVGRHFTCALKR 60

Query: 61  KTTRLPGGPVCGHSAAVGIGGQKGGASNICCMEPALHPWGLAGPLVTISSGNVTNILILT 120
           KTTRLPGGPVCGHSAAVGIGGQKGGASNICCMEPALHPWGLAGPLVTISSGNVTNILILT
Sbjct: 61  KTTRLPGGPVCGHSAAVGIGGQKGGASNICCMEPALHPWGLAGPLVTISSGNVTNILILT 120

Query: 121 VAAGVKGLGTCFFSEISHSITLEELPCRDHILKLCQDIFLACETHELELEEELSAKLIFL 180
           VAAGVKGLGTCFFSEISHSITLEELPCRDHILKLCQDIFLACETHELELEEELSAKLIFL
Sbjct: 121 VAAGVKGLGTCFFSEISHSITLEELPCRDHILKLCQDIFLACETHELELEEELSAKLIFL 180

Query: 181 YRSLETMIKWTREE 194
           YRSLETMIKWTREE
Sbjct: 181 YRSLETMIKWTREE 194


>gi|169214611 PREDICTED: similar to hCG1790590 [Homo sapiens]
          Length = 194

 Score =  395 bits (1016), Expect = e-111
 Identities = 194/194 (100%), Positives = 194/194 (100%)

Query: 1   MRSGNDCGRRAFVYTEDTQASTTRVLNSETAVPSKGLVSLQLPRLIDETVGRHFTCALKR 60
           MRSGNDCGRRAFVYTEDTQASTTRVLNSETAVPSKGLVSLQLPRLIDETVGRHFTCALKR
Sbjct: 1   MRSGNDCGRRAFVYTEDTQASTTRVLNSETAVPSKGLVSLQLPRLIDETVGRHFTCALKR 60

Query: 61  KTTRLPGGPVCGHSAAVGIGGQKGGASNICCMEPALHPWGLAGPLVTISSGNVTNILILT 120
           KTTRLPGGPVCGHSAAVGIGGQKGGASNICCMEPALHPWGLAGPLVTISSGNVTNILILT
Sbjct: 61  KTTRLPGGPVCGHSAAVGIGGQKGGASNICCMEPALHPWGLAGPLVTISSGNVTNILILT 120

Query: 121 VAAGVKGLGTCFFSEISHSITLEELPCRDHILKLCQDIFLACETHELELEEELSAKLIFL 180
           VAAGVKGLGTCFFSEISHSITLEELPCRDHILKLCQDIFLACETHELELEEELSAKLIFL
Sbjct: 121 VAAGVKGLGTCFFSEISHSITLEELPCRDHILKLCQDIFLACETHELELEEELSAKLIFL 180

Query: 181 YRSLETMIKWTREE 194
           YRSLETMIKWTREE
Sbjct: 181 YRSLETMIKWTREE 194


>gi|218749848 family with sequence similarity 38, member A [Homo
            sapiens]
          Length = 2090

 Score =  107 bits (266), Expect = 8e-24
 Identities = 56/78 (71%), Positives = 61/78 (78%), Gaps = 4/78 (5%)

Query: 117  LILTVAAGVKGLGTCFFSEISHSITLEELPCRDHILKLCQDIFLACETHELELEEELSAK 176
            ++L +   V+G    FFSEISHSI  EELPC D ILKLCQDIFL  ET ELELEEEL AK
Sbjct: 2016 IVLVIGKFVRG----FFSEISHSIMFEELPCVDRILKLCQDIFLVRETRELELEEELYAK 2071

Query: 177  LIFLYRSLETMIKWTREE 194
            LIFLYRS ETMIKWTRE+
Sbjct: 2072 LIFLYRSPETMIKWTREK 2089


>gi|13384602 hypothetical protein LOC63895 [Homo sapiens]
          Length = 544

 Score = 93.6 bits (231), Expect = 9e-20
 Identities = 49/63 (77%), Positives = 51/63 (80%)

Query: 132 FFSEISHSITLEELPCRDHILKLCQDIFLACETHELELEEELSAKLIFLYRSLETMIKWT 191
           FFS ISHSI  EELP  D ILKLC DIFL  ET ELELEE+L AKLIFLYRS ETMIKWT
Sbjct: 480 FFSGISHSIMFEELPNVDRILKLCTDIFLVRETGELELEEDLYAKLIFLYRSPETMIKWT 539

Query: 192 REE 194
           RE+
Sbjct: 540 REK 542


>gi|9506663 ring finger protein 186 [Homo sapiens]
          Length = 227

 Score = 34.7 bits (78), Expect = 0.052
 Identities = 22/53 (41%), Positives = 25/53 (47%), Gaps = 10/53 (18%)

Query: 55  TCALKRKTTRLPGGPVCG---HSAAVGIGGQKGGASNICCMEPALHPWGLAGP 104
           TC L RK T +PGG +C    H A VG   Q        C E +L P GL  P
Sbjct: 81  TCPLCRKVTAVPGGLICSLRDHEAVVGQLAQP-------CTEVSLCPQGLVDP 126


>gi|61835172 fragile X mental retardation-related protein 1 isoform
           c [Homo sapiens]
          Length = 536

 Score = 31.2 bits (69), Expect = 0.58
 Identities = 31/101 (30%), Positives = 43/101 (42%), Gaps = 7/101 (6%)

Query: 3   SGNDCGRRAFVYTEDTQASTTRVLNSETAVPSKGLVSLQLPRLIDETVGRHFTCALKRKT 62
           SG   GRR   YT     ++     SET    K  +S       D+   RH     +R +
Sbjct: 299 SGRGRGRRGPNYTSGYGTNSELSNPSETESERKDELSDWSLAGEDDRDSRH-----QRDS 353

Query: 63  TRLPGGPVCGHSAAVGIGGQKGGASNICCM--EPALHPWGL 101
            R PGG     S   G GG +GG S+I  +  +P  +P+ L
Sbjct: 354 RRRPGGRGRSVSGGRGRGGPRGGKSSISSVLKDPDSNPYSL 394


>gi|61835164 fragile X mental retardation-related protein 1 isoform
           b [Homo sapiens]
          Length = 539

 Score = 31.2 bits (69), Expect = 0.58
 Identities = 31/101 (30%), Positives = 43/101 (42%), Gaps = 7/101 (6%)

Query: 3   SGNDCGRRAFVYTEDTQASTTRVLNSETAVPSKGLVSLQLPRLIDETVGRHFTCALKRKT 62
           SG   GRR   YT     ++     SET    K  +S       D+   RH     +R +
Sbjct: 384 SGRGRGRRGPNYTSGYGTNSELSNPSETESERKDELSDWSLAGEDDRDSRH-----QRDS 438

Query: 63  TRLPGGPVCGHSAAVGIGGQKGGASNICCM--EPALHPWGL 101
            R PGG     S   G GG +GG S+I  +  +P  +P+ L
Sbjct: 439 RRRPGGRGRSVSGGRGRGGPRGGKSSISSVLKDPDSNPYSL 479


>gi|61835148 fragile X mental retardation-related protein 1 isoform
           a [Homo sapiens]
          Length = 621

 Score = 31.2 bits (69), Expect = 0.58
 Identities = 31/101 (30%), Positives = 43/101 (42%), Gaps = 7/101 (6%)

Query: 3   SGNDCGRRAFVYTEDTQASTTRVLNSETAVPSKGLVSLQLPRLIDETVGRHFTCALKRKT 62
           SG   GRR   YT     ++     SET    K  +S       D+   RH     +R +
Sbjct: 384 SGRGRGRRGPNYTSGYGTNSELSNPSETESERKDELSDWSLAGEDDRDSRH-----QRDS 438

Query: 63  TRLPGGPVCGHSAAVGIGGQKGGASNICCM--EPALHPWGL 101
            R PGG     S   G GG +GG S+I  +  +P  +P+ L
Sbjct: 439 RRRPGGRGRSVSGGRGRGGPRGGKSSISSVLKDPDSNPYSL 479


>gi|239755810 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 499

 Score = 30.4 bits (67), Expect = 0.99
 Identities = 16/45 (35%), Positives = 19/45 (42%)

Query: 59  KRKTTRLPGGPVCGHSAAVGIGGQKGGASNICCMEPALHPWGLAG 103
           +  +T  PG PV G S   G GGQ+     IC   P     G  G
Sbjct: 128 RHHSTGQPGAPVLGGSGTAGNGGQRVSHRGICGPSPLQRLGGSTG 172


>gi|239750310 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 499

 Score = 30.4 bits (67), Expect = 0.99
 Identities = 16/45 (35%), Positives = 19/45 (42%)

Query: 59  KRKTTRLPGGPVCGHSAAVGIGGQKGGASNICCMEPALHPWGLAG 103
           +  +T  PG PV G S   G GGQ+     IC   P     G  G
Sbjct: 128 RHHSTGQPGAPVLGGSGTAGNGGQRVSHRGICGPSPLQRLGGSTG 172


>gi|239744621 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 536

 Score = 30.4 bits (67), Expect = 0.99
 Identities = 16/45 (35%), Positives = 19/45 (42%)

Query: 59  KRKTTRLPGGPVCGHSAAVGIGGQKGGASNICCMEPALHPWGLAG 103
           +  +T  PG PV G S   G GGQ+     IC   P     G  G
Sbjct: 165 RHHSTGQPGAPVLGGSGTAGNGGQRVSHRGICGPSPLQRLGGSTG 209


>gi|59891448 rapamycin-insensitive companion of mTOR [Homo sapiens]
          Length = 1708

 Score = 29.3 bits (64), Expect = 2.2
 Identities = 18/49 (36%), Positives = 26/49 (53%), Gaps = 8/49 (16%)

Query: 131  CFFSEISHSIT--LEELPCRDHILKLCQDIFLACETHELELEEELSAKL 177
            C +SE+SH ++     LPCR  I +L QD+        L++ EE  A L
Sbjct: 1651 CLYSEVSHLLSHCTFRLPCRRFIQELFQDV------QFLQMHEEAEAVL 1693


>gi|163644325 MCF.2 cell line derived transforming sequence-like
           isoform a [Homo sapiens]
          Length = 1182

 Score = 28.9 bits (63), Expect = 2.9
 Identities = 16/47 (34%), Positives = 24/47 (51%), Gaps = 2/47 (4%)

Query: 149 DHILKLCQDIFLACETHELELEEE--LSAKLIFLYRSLETMIKWTRE 193
           D I   CQ++   C+    E+     L +K + L+R LET +KW  E
Sbjct: 454 DSIRPKCQELRHLCDQFSAEIARRRGLLSKSLELHRRLETSMKWCDE 500


>gi|163644323 MCF.2 cell line derived transforming sequence-like
           isoform b [Homo sapiens]
          Length = 1129

 Score = 28.9 bits (63), Expect = 2.9
 Identities = 16/47 (34%), Positives = 24/47 (51%), Gaps = 2/47 (4%)

Query: 149 DHILKLCQDIFLACETHELELEEE--LSAKLIFLYRSLETMIKWTRE 193
           D I   CQ++   C+    E+     L +K + L+R LET +KW  E
Sbjct: 401 DSIRPKCQELRHLCDQFSAEIARRRGLLSKSLELHRRLETSMKWCDE 447


>gi|114431246 keratin 25D [Homo sapiens]
          Length = 464

 Score = 28.5 bits (62), Expect = 3.7
 Identities = 14/39 (35%), Positives = 20/39 (51%), Gaps = 4/39 (10%)

Query: 51 GRHFTCALKRKTTRLPGGP----VCGHSAAVGIGGQKGG 85
          G  F+CAL      +PGG       G++A +G  G +GG
Sbjct: 42 GSEFSCALGGGLGSVPGGSHAGGALGNAACIGFAGSEGG 80


>gi|239756779 PREDICTED: similar to hCG1643102 [Homo sapiens]
          Length = 186

 Score = 28.5 bits (62), Expect = 3.7
 Identities = 12/35 (34%), Positives = 18/35 (51%)

Query: 92  MEPALHPWGLAGPLVTISSGNVTNILILTVAAGVK 126
           M PA HP G+AGPL T     ++ +      +G +
Sbjct: 30  MSPAFHPRGVAGPLNTSPDSTISGLFHFVPFSGAE 64


>gi|239746599 PREDICTED: hypothetical protein XP_002343795 [Homo
           sapiens]
          Length = 443

 Score = 28.5 bits (62), Expect = 3.7
 Identities = 14/37 (37%), Positives = 19/37 (51%), Gaps = 1/37 (2%)

Query: 55  TCALKRKTTRLPGGPV-CGHSAAVGIGGQKGGASNIC 90
           TC +K K  R P  P  CGH  +    G++GG +  C
Sbjct: 288 TCLVKAKALRSPPTPAACGHLESSASKGKQGGCAVPC 324


>gi|239745753 PREDICTED: hypothetical protein XP_002343545 [Homo
           sapiens]
          Length = 186

 Score = 28.5 bits (62), Expect = 3.7
 Identities = 12/35 (34%), Positives = 18/35 (51%)

Query: 92  MEPALHPWGLAGPLVTISSGNVTNILILTVAAGVK 126
           M PA HP G+AGPL T     ++ +      +G +
Sbjct: 30  MSPAFHPRGVAGPLNTSPDSTISGLFHFVPFSGAE 64


>gi|5031795 inhibin beta C chain preproprotein [Homo sapiens]
          Length = 352

 Score = 28.5 bits (62), Expect = 3.7
 Identities = 17/49 (34%), Positives = 24/49 (48%), Gaps = 1/49 (2%)

Query: 83  KGGASNICCMEPALHPWGLAGPLVTISSGNVTNILILTVAAGVKGLGTC 131
           +G A N C  +  LH  G+ G   +  +  V N+L    AAG  G G+C
Sbjct: 269 EGYAMNFCIGQCPLHIAGMPGIAASFHTA-VLNLLKANTAAGTTGGGSC 316


>gi|134142817 es1 protein isoform Ib precursor [Homo sapiens]
          Length = 237

 Score = 27.7 bits (60), Expect = 6.4
 Identities = 16/48 (33%), Positives = 21/48 (43%)

Query: 61  KTTRLPGGPVCGHSAAVGIGGQKGGASNICCMEPALHPWGLAGPLVTI 108
           K T L       H AA+  GG     + +CC+ P L    L G  VT+
Sbjct: 116 KITDLANLSAANHDAAIFPGGFGAAKNLLCCIAPVLAAKVLRGVEVTV 163


>gi|21389395 hypothetical protein LOC123970 [Homo sapiens]
          Length = 265

 Score = 27.7 bits (60), Expect = 6.4
 Identities = 11/29 (37%), Positives = 19/29 (65%)

Query: 151 ILKLCQDIFLACETHELELEEELSAKLIF 179
           +LKLC+D  +  + H   +EE++ AK +F
Sbjct: 229 LLKLCKDAGMNVDIHPHMVEEDIDAKKVF 257


>gi|157743267 ankyrin repeat domain 58 [Homo sapiens]
          Length = 315

 Score = 27.3 bits (59), Expect = 8.4
 Identities = 11/24 (45%), Positives = 14/24 (58%)

Query: 79  IGGQKGGASNICCMEPALHPWGLA 102
           +GG  G  S+  C+EP  H W LA
Sbjct: 97  LGGPSGPGSSRLCLEPREHAWILA 120


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.320    0.136    0.415 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 7,717,482
Number of Sequences: 37866
Number of extensions: 346994
Number of successful extensions: 788
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 10
Number of HSP's that attempted gapping in prelim test: 775
Number of HSP's gapped (non-prelim): 24
length of query: 194
length of database: 18,247,518
effective HSP length: 97
effective length of query: 97
effective length of database: 14,574,516
effective search space: 1413728052
effective search space used: 1413728052
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 59 (27.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.