BLASTP 2.2.11 [Jun-05-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= gi|169167309 PREDICTED: similar to hCG1640714 [Homo sapiens] (597 letters) Database: hs.faa 37,866 sequences; 18,247,518 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gi|169166591 PREDICTED: similar to hCG1640714 [Homo sapiens] 1229 0.0 gi|169167309 PREDICTED: similar to hCG1640714 [Homo sapiens] 1229 0.0 gi|4504035 guanine monophosphate synthetase [Homo sapiens] 233 5e-61 gi|239755464 PREDICTED: similar to hCG2045708 [Homo sapiens] 33 0.57 gi|239749955 PREDICTED: similar to hCG2045708 [Homo sapiens] 33 0.57 gi|239744269 PREDICTED: hypothetical protein XP_002343109 [Homo ... 33 0.57 gi|21450832 spindle and KT associated 1 [Homo sapiens] 33 0.75 gi|88014625 spindle and KT associated 1 [Homo sapiens] 33 0.75 gi|4505293 MYB-related protein B [Homo sapiens] 33 0.97 gi|239749902 PREDICTED: similar to hCG2040253 [Homo sapiens] 31 3.7 gi|239744202 PREDICTED: similar to hCG2040253 [Homo sapiens] 31 3.7 gi|148536862 SWI/SNF-related matrix-associated actin-dependent r... 30 4.8 gi|70995235 AMMECR1 protein isoform 2 [Homo sapiens] 30 4.8 gi|7669554 AMMECR1 protein isoform 1 [Homo sapiens] 30 4.8 gi|14719400 ADP-ribosylation factor binding protein 3 isoform sh... 30 4.8 gi|20336267 ADP-ribosylation factor binding protein 3 isoform lo... 30 4.8 gi|60097902 filaggrin [Homo sapiens] 30 6.3 gi|148762940 DVL-binding protein DAPLE [Homo sapiens] 30 8.2 >gi|169166591 PREDICTED: similar to hCG1640714 [Homo sapiens] Length = 597 Score = 1229 bits (3179), Expect = 0.0 Identities = 597/597 (100%), Positives = 597/597 (100%) Query: 1 MTHTVQGLDVAGLLKALPPIKLHSCSAETDEDRQEHLGRNENGRAEQGARHTALQGTQKA 60 MTHTVQGLDVAGLLKALPPIKLHSCSAETDEDRQEHLGRNENGRAEQGARHTALQGTQKA Sbjct: 1 MTHTVQGLDVAGLLKALPPIKLHSCSAETDEDRQEHLGRNENGRAEQGARHTALQGTQKA 60 Query: 61 AIPDSESSSCPGKADGSCQKPGPGLVGLTGKLKLAPQLLIKQDIVSLLSNFVTRLCFPEL 120 AIPDSESSSCPGKADGSCQKPGPGLVGLTGKLKLAPQLLIKQDIVSLLSNFVTRLCFPEL Sbjct: 61 AIPDSESSSCPGKADGSCQKPGPGLVGLTGKLKLAPQLLIKQDIVSLLSNFVTRLCFPEL 120 Query: 121 LSPQFFVQEPQHLPMQSMDFSWACSHATRRLAVTVSWGDVHEQGLWGPLLAVASPGLGFL 180 LSPQFFVQEPQHLPMQSMDFSWACSHATRRLAVTVSWGDVHEQGLWGPLLAVASPGLGFL Sbjct: 121 LSPQFFVQEPQHLPMQSMDFSWACSHATRRLAVTVSWGDVHEQGLWGPLLAVASPGLGFL 180 Query: 181 VALWSARDLDWADWTVPHPDQLVICIFGPPVKEPPTDVTPTFLTTGVLSTLRQADFEAHN 240 VALWSARDLDWADWTVPHPDQLVICIFGPPVKEPPTDVTPTFLTTGVLSTLRQADFEAHN Sbjct: 181 VALWSARDLDWADWTVPHPDQLVICIFGPPVKEPPTDVTPTFLTTGVLSTLRQADFEAHN 240 Query: 241 ILRESGYAGKISQMPVILTPLHFDRDPLQKQPSCQRSVVIRTFITSDSLTGIPATPGNEI 300 ILRESGYAGKISQMPVILTPLHFDRDPLQKQPSCQRSVVIRTFITSDSLTGIPATPGNEI Sbjct: 241 ILRESGYAGKISQMPVILTPLHFDRDPLQKQPSCQRSVVIRTFITSDSLTGIPATPGNEI 300 Query: 301 PVEVVLKMVTEIKKIPGISRIIAGGCYLHFTGEKTKAHEAMPSPVASKWQSRSTDRFLGF 360 PVEVVLKMVTEIKKIPGISRIIAGGCYLHFTGEKTKAHEAMPSPVASKWQSRSTDRFLGF Sbjct: 301 PVEVVLKMVTEIKKIPGISRIIAGGCYLHFTGEKTKAHEAMPSPVASKWQSRSTDRFLGF 360 Query: 361 QEQQDVWLSGESPPALLLETHWEVFKSHPSALRATDKGDARAMVSSRAFCWVCAWKALPA 420 QEQQDVWLSGESPPALLLETHWEVFKSHPSALRATDKGDARAMVSSRAFCWVCAWKALPA Sbjct: 361 QEQQDVWLSGESPPALLLETHWEVFKSHPSALRATDKGDARAMVSSRAFCWVCAWKALPA 420 Query: 421 EAKALSPMLSVTCRDSMSYVGQWGSFPVPPLWYLDRYATLGGDAEDWRELQGCCGGSYVG 480 EAKALSPMLSVTCRDSMSYVGQWGSFPVPPLWYLDRYATLGGDAEDWRELQGCCGGSYVG Sbjct: 421 EAKALSPMLSVTCRDSMSYVGQWGSFPVPPLWYLDRYATLGGDAEDWRELQGCCGGSYVG 480 Query: 481 NEEHCAKESQAPGQQVRQTQGEGRTVDLLGRRVSDSLGSRLTPAPTNQDIPASSGVGVFS 540 NEEHCAKESQAPGQQVRQTQGEGRTVDLLGRRVSDSLGSRLTPAPTNQDIPASSGVGVFS Sbjct: 481 NEEHCAKESQAPGQQVRQTQGEGRTVDLLGRRVSDSLGSRLTPAPTNQDIPASSGVGVFS 540 Query: 541 SSPGTRTADHFLQASDPAAQPPIRLGWPSVIWKAYEPRVLVLQRAVPEIMGPRALLF 597 SSPGTRTADHFLQASDPAAQPPIRLGWPSVIWKAYEPRVLVLQRAVPEIMGPRALLF Sbjct: 541 SSPGTRTADHFLQASDPAAQPPIRLGWPSVIWKAYEPRVLVLQRAVPEIMGPRALLF 597 >gi|169167309 PREDICTED: similar to hCG1640714 [Homo sapiens] Length = 597 Score = 1229 bits (3179), Expect = 0.0 Identities = 597/597 (100%), Positives = 597/597 (100%) Query: 1 MTHTVQGLDVAGLLKALPPIKLHSCSAETDEDRQEHLGRNENGRAEQGARHTALQGTQKA 60 MTHTVQGLDVAGLLKALPPIKLHSCSAETDEDRQEHLGRNENGRAEQGARHTALQGTQKA Sbjct: 1 MTHTVQGLDVAGLLKALPPIKLHSCSAETDEDRQEHLGRNENGRAEQGARHTALQGTQKA 60 Query: 61 AIPDSESSSCPGKADGSCQKPGPGLVGLTGKLKLAPQLLIKQDIVSLLSNFVTRLCFPEL 120 AIPDSESSSCPGKADGSCQKPGPGLVGLTGKLKLAPQLLIKQDIVSLLSNFVTRLCFPEL Sbjct: 61 AIPDSESSSCPGKADGSCQKPGPGLVGLTGKLKLAPQLLIKQDIVSLLSNFVTRLCFPEL 120 Query: 121 LSPQFFVQEPQHLPMQSMDFSWACSHATRRLAVTVSWGDVHEQGLWGPLLAVASPGLGFL 180 LSPQFFVQEPQHLPMQSMDFSWACSHATRRLAVTVSWGDVHEQGLWGPLLAVASPGLGFL Sbjct: 121 LSPQFFVQEPQHLPMQSMDFSWACSHATRRLAVTVSWGDVHEQGLWGPLLAVASPGLGFL 180 Query: 181 VALWSARDLDWADWTVPHPDQLVICIFGPPVKEPPTDVTPTFLTTGVLSTLRQADFEAHN 240 VALWSARDLDWADWTVPHPDQLVICIFGPPVKEPPTDVTPTFLTTGVLSTLRQADFEAHN Sbjct: 181 VALWSARDLDWADWTVPHPDQLVICIFGPPVKEPPTDVTPTFLTTGVLSTLRQADFEAHN 240 Query: 241 ILRESGYAGKISQMPVILTPLHFDRDPLQKQPSCQRSVVIRTFITSDSLTGIPATPGNEI 300 ILRESGYAGKISQMPVILTPLHFDRDPLQKQPSCQRSVVIRTFITSDSLTGIPATPGNEI Sbjct: 241 ILRESGYAGKISQMPVILTPLHFDRDPLQKQPSCQRSVVIRTFITSDSLTGIPATPGNEI 300 Query: 301 PVEVVLKMVTEIKKIPGISRIIAGGCYLHFTGEKTKAHEAMPSPVASKWQSRSTDRFLGF 360 PVEVVLKMVTEIKKIPGISRIIAGGCYLHFTGEKTKAHEAMPSPVASKWQSRSTDRFLGF Sbjct: 301 PVEVVLKMVTEIKKIPGISRIIAGGCYLHFTGEKTKAHEAMPSPVASKWQSRSTDRFLGF 360 Query: 361 QEQQDVWLSGESPPALLLETHWEVFKSHPSALRATDKGDARAMVSSRAFCWVCAWKALPA 420 QEQQDVWLSGESPPALLLETHWEVFKSHPSALRATDKGDARAMVSSRAFCWVCAWKALPA Sbjct: 361 QEQQDVWLSGESPPALLLETHWEVFKSHPSALRATDKGDARAMVSSRAFCWVCAWKALPA 420 Query: 421 EAKALSPMLSVTCRDSMSYVGQWGSFPVPPLWYLDRYATLGGDAEDWRELQGCCGGSYVG 480 EAKALSPMLSVTCRDSMSYVGQWGSFPVPPLWYLDRYATLGGDAEDWRELQGCCGGSYVG Sbjct: 421 EAKALSPMLSVTCRDSMSYVGQWGSFPVPPLWYLDRYATLGGDAEDWRELQGCCGGSYVG 480 Query: 481 NEEHCAKESQAPGQQVRQTQGEGRTVDLLGRRVSDSLGSRLTPAPTNQDIPASSGVGVFS 540 NEEHCAKESQAPGQQVRQTQGEGRTVDLLGRRVSDSLGSRLTPAPTNQDIPASSGVGVFS Sbjct: 481 NEEHCAKESQAPGQQVRQTQGEGRTVDLLGRRVSDSLGSRLTPAPTNQDIPASSGVGVFS 540 Query: 541 SSPGTRTADHFLQASDPAAQPPIRLGWPSVIWKAYEPRVLVLQRAVPEIMGPRALLF 597 SSPGTRTADHFLQASDPAAQPPIRLGWPSVIWKAYEPRVLVLQRAVPEIMGPRALLF Sbjct: 541 SSPGTRTADHFLQASDPAAQPPIRLGWPSVIWKAYEPRVLVLQRAVPEIMGPRALLF 597 >gi|4504035 guanine monophosphate synthetase [Homo sapiens] Length = 693 Score = 233 bits (593), Expect = 5e-61 Identities = 116/125 (92%), Positives = 119/125 (95%) Query: 198 HPDQLVICIFGPPVKEPPTDVTPTFLTTGVLSTLRQADFEAHNILRESGYAGKISQMPVI 257 H V+ IFGPPVKEPPTDVTPTFLTTGVLSTLRQADFEAHNILRESGYAGKISQMPVI Sbjct: 555 HNVNRVVYIFGPPVKEPPTDVTPTFLTTGVLSTLRQADFEAHNILRESGYAGKISQMPVI 614 Query: 258 LTPLHFDRDPLQKQPSCQRSVVIRTFITSDSLTGIPATPGNEIPVEVVLKMVTEIKKIPG 317 LTPLHFDRDPLQKQPSCQRSVVIRTFITSD +TGIPATPGNEIPVEVVLKMVTEIKKIPG Sbjct: 615 LTPLHFDRDPLQKQPSCQRSVVIRTFITSDFMTGIPATPGNEIPVEVVLKMVTEIKKIPG 674 Query: 318 ISRII 322 ISRI+ Sbjct: 675 ISRIM 679 >gi|239755464 PREDICTED: similar to hCG2045708 [Homo sapiens] Length = 445 Score = 33.5 bits (75), Expect = 0.57 Identities = 31/115 (26%), Positives = 44/115 (38%), Gaps = 7/115 (6%) Query: 460 LGGDAEDWRELQGCCGGSYVGNEEHCAKESQAPGQQVRQTQGEGRTVDLLGRRVSD---- 515 L GD ++ R Q G ++E C ++ + V + L +R+ Sbjct: 75 LAGDIQEPRFSQ-TSGSRLAADKEVCPEKRKLTESDVPFPRSPDHGSPKLEQRLQSCSQR 133 Query: 516 SLGSRLTPAPTNQDIPASSGVGVFS--SSPGTRTADHFLQASDPAAQPPIRLGWP 568 G P T+ IP G S S+PGTRT Q PAA+ P WP Sbjct: 134 GAGDPYAPKVTSPGIPGPLGTMTLSTISNPGTRTTCAHHQEGGPAAKVPGPTAWP 188 >gi|239749955 PREDICTED: similar to hCG2045708 [Homo sapiens] Length = 445 Score = 33.5 bits (75), Expect = 0.57 Identities = 31/115 (26%), Positives = 44/115 (38%), Gaps = 7/115 (6%) Query: 460 LGGDAEDWRELQGCCGGSYVGNEEHCAKESQAPGQQVRQTQGEGRTVDLLGRRVSD---- 515 L GD ++ R Q G ++E C ++ + V + L +R+ Sbjct: 75 LAGDIQEPRFSQ-TSGSRLAADKEVCPEKRKLTESDVPFPRSPDHGSPKLEQRLQSCSQR 133 Query: 516 SLGSRLTPAPTNQDIPASSGVGVFS--SSPGTRTADHFLQASDPAAQPPIRLGWP 568 G P T+ IP G S S+PGTRT Q PAA+ P WP Sbjct: 134 GAGDPYAPKVTSPGIPGPLGTMTLSTISNPGTRTTCAHHQEGGPAAKVPGPTAWP 188 >gi|239744269 PREDICTED: hypothetical protein XP_002343109 [Homo sapiens] Length = 445 Score = 33.5 bits (75), Expect = 0.57 Identities = 31/115 (26%), Positives = 44/115 (38%), Gaps = 7/115 (6%) Query: 460 LGGDAEDWRELQGCCGGSYVGNEEHCAKESQAPGQQVRQTQGEGRTVDLLGRRVSD---- 515 L GD ++ R Q G ++E C ++ + V + L +R+ Sbjct: 75 LAGDIQEPRFSQ-TSGSRLAADKEVCPEKRKLTESDVPFPRSPDHGSPKLEQRLQSCSQR 133 Query: 516 SLGSRLTPAPTNQDIPASSGVGVFS--SSPGTRTADHFLQASDPAAQPPIRLGWP 568 G P T+ IP G S S+PGTRT Q PAA+ P WP Sbjct: 134 GAGDPYAPKVTSPGIPGPLGTMTLSTISNPGTRTTCAHHQEGGPAAKVPGPTAWP 188 >gi|21450832 spindle and KT associated 1 [Homo sapiens] Length = 255 Score = 33.1 bits (74), Expect = 0.75 Identities = 15/49 (30%), Positives = 26/49 (53%) Query: 266 DPLQKQPSCQRSVVIRTFITSDSLTGIPATPGNEIPVEVVLKMVTEIKK 314 +P++K P QRS+ FIT D G+P+ + + + ++ EI K Sbjct: 122 EPVKKPPKEQRSIKEMPFITCDEFNGVPSYMKSRLTYNQINDVIKEINK 170 >gi|88014625 spindle and KT associated 1 [Homo sapiens] Length = 255 Score = 33.1 bits (74), Expect = 0.75 Identities = 15/49 (30%), Positives = 26/49 (53%) Query: 266 DPLQKQPSCQRSVVIRTFITSDSLTGIPATPGNEIPVEVVLKMVTEIKK 314 +P++K P QRS+ FIT D G+P+ + + + ++ EI K Sbjct: 122 EPVKKPPKEQRSIKEMPFITCDEFNGVPSYMKSRLTYNQINDVIKEINK 170 >gi|4505293 MYB-related protein B [Homo sapiens] Length = 700 Score = 32.7 bits (73), Expect = 0.97 Identities = 19/65 (29%), Positives = 30/65 (46%), Gaps = 8/65 (12%) Query: 252 SQMPVILTPLHFDRDPLQKQPSCQRSVVIRTFITSDSLTGIPATPGNEIPVEVVLKMVTE 311 SQ V+ TPLH D+ PL ++ + F+T D + TP P + L+ Sbjct: 480 SQKVVVTTPLHRDKTPLHQKHA--------AFVTPDQKYSMDNTPHTPTPFKNALEKYGP 531 Query: 312 IKKIP 316 +K +P Sbjct: 532 LKPLP 536 >gi|239749902 PREDICTED: similar to hCG2040253 [Homo sapiens] Length = 251 Score = 30.8 bits (68), Expect = 3.7 Identities = 27/117 (23%), Positives = 41/117 (35%), Gaps = 7/117 (5%) Query: 452 WYLDRYATLGGDAEDWRELQGCCGGSYVGNEEHCAKESQAPGQQVRQTQGEGRTVDLLGR 511 W D ++ E+ +E QG C E A ++ Q + +G + + G Sbjct: 106 WKEDGGSSSASQPEEMQE-QGACSNKGTAQERKAAATPESQEPQAKGAEGNAASEEAPGY 164 Query: 512 RVSDSLGSRLTPAPTNQDIPASSGVG------VFSSSPGTRTADHFLQASDPAAQPP 562 R SLG+ P P + + G G + S PG FL PP Sbjct: 165 RDIHSLGAESGPIPGSAEQNEELGGGSKNRAVLVRSLPGPGALTAFLCPERKGLLPP 221 >gi|239744202 PREDICTED: similar to hCG2040253 [Homo sapiens] Length = 251 Score = 30.8 bits (68), Expect = 3.7 Identities = 27/117 (23%), Positives = 41/117 (35%), Gaps = 7/117 (5%) Query: 452 WYLDRYATLGGDAEDWRELQGCCGGSYVGNEEHCAKESQAPGQQVRQTQGEGRTVDLLGR 511 W D ++ E+ +E QG C E A ++ Q + +G + + G Sbjct: 106 WKEDGGSSSASQPEEMQE-QGACSNKGTAQERKAAATPESQEPQAKGAEGNAASEEAPGY 164 Query: 512 RVSDSLGSRLTPAPTNQDIPASSGVG------VFSSSPGTRTADHFLQASDPAAQPP 562 R SLG+ P P + + G G + S PG FL PP Sbjct: 165 RDIHSLGAESGPIPGSAEQNEELGGGSKNRAVLVRSLPGPGALTAFLCPERKGLLPP 221 >gi|148536862 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin d2 isoform 2 [Homo sapiens] Length = 510 Score = 30.4 bits (67), Expect = 4.8 Identities = 29/89 (32%), Positives = 36/89 (40%), Gaps = 11/89 (12%) Query: 510 GRRVSDSLGSRLTPA-PTNQDIPASSGVGVFS-----SSPGTRTADHFLQASDPAAQP-- 561 G V+ +LG+ PA P PA G G SPG R LQ PA P Sbjct: 18 GGAVAAALGAPPPPAGPGMLPGPALRGPGPAQYQRPGMSPGNRMPMAGLQVGPPAGSPFG 77 Query: 562 ---PIRLGWPSVIWKAYEPRVLVLQRAVP 587 P+R G P + + R+LV Q P Sbjct: 78 AAAPLRPGMPPTMMDPFRKRLLVPQAQPP 106 >gi|70995235 AMMECR1 protein isoform 2 [Homo sapiens] Length = 296 Score = 30.4 bits (67), Expect = 4.8 Identities = 26/101 (25%), Positives = 38/101 (37%), Gaps = 11/101 (10%) Query: 472 GCCGGSYVGNEEHCAKESQAPGQQVRQTQGEGRTVDLLGRRVSDSLGSRLTPAPTNQ--- 528 G GG + HC+ ESQ ++ G G ++ LG GS T +P Sbjct: 20 GSGGGGGASSSSHCSGESQCRAGELG-LGGAGTRLNGLGGLTGGGSGSGCTLSPPQGCGG 78 Query: 529 -------DIPASSGVGVFSSSPGTRTADHFLQASDPAAQPP 562 P S GVG S+P T+ +S ++ P Sbjct: 79 GGGGIALSPPPSCGVGTLLSTPAAATSSSPSSSSAASSSSP 119 >gi|7669554 AMMECR1 protein isoform 1 [Homo sapiens] Length = 333 Score = 30.4 bits (67), Expect = 4.8 Identities = 26/101 (25%), Positives = 38/101 (37%), Gaps = 11/101 (10%) Query: 472 GCCGGSYVGNEEHCAKESQAPGQQVRQTQGEGRTVDLLGRRVSDSLGSRLTPAPTNQ--- 528 G GG + HC+ ESQ ++ G G ++ LG GS T +P Sbjct: 20 GSGGGGGASSSSHCSGESQCRAGELG-LGGAGTRLNGLGGLTGGGSGSGCTLSPPQGCGG 78 Query: 529 -------DIPASSGVGVFSSSPGTRTADHFLQASDPAAQPP 562 P S GVG S+P T+ +S ++ P Sbjct: 79 GGGGIALSPPPSCGVGTLLSTPAAATSSSPSSSSAASSSSP 119 >gi|14719400 ADP-ribosylation factor binding protein 3 isoform short [Homo sapiens] Length = 690 Score = 30.4 bits (67), Expect = 4.8 Identities = 17/46 (36%), Positives = 23/46 (50%), Gaps = 4/46 (8%) Query: 498 QTQGEGRTVDLLGRRVSDSLGSRLTPAPTNQDIPASSGVGVFSSSP 543 Q +G +DL ++SL S L PAPT P SSG+ + P Sbjct: 286 QCSNQGTLIDLAELDTTNSLSSVLAPAPT----PPSSGIPILPPPP 327 >gi|20336267 ADP-ribosylation factor binding protein 3 isoform long [Homo sapiens] Length = 723 Score = 30.4 bits (67), Expect = 4.8 Identities = 17/46 (36%), Positives = 23/46 (50%), Gaps = 4/46 (8%) Query: 498 QTQGEGRTVDLLGRRVSDSLGSRLTPAPTNQDIPASSGVGVFSSSP 543 Q +G +DL ++SL S L PAPT P SSG+ + P Sbjct: 319 QCSNQGTLIDLAELDTTNSLSSVLAPAPT----PPSSGIPILPPPP 360 >gi|60097902 filaggrin [Homo sapiens] Length = 4061 Score = 30.0 bits (66), Expect = 6.3 Identities = 15/48 (31%), Positives = 22/48 (45%), Gaps = 1/48 (2%) Query: 30 DEDRQEHLGRNENGRAEQGARHTALQGTQKAAIPDSESSSCPGKADGS 77 DEDR H G + + + G RH + A ++ S PG+ GS Sbjct: 340 DEDRASH-GHSADSSRQSGTRHAETSSRGQTASSHEQARSSPGERHGS 386 >gi|148762940 DVL-binding protein DAPLE [Homo sapiens] Length = 2028 Score = 29.6 bits (65), Expect = 8.2 Identities = 22/55 (40%), Positives = 24/55 (43%), Gaps = 6/55 (10%) Query: 48 GARHTALQGTQKAAIPDSES-----SSCPGKADGSCQKPGPGLVGL-TGKLKLAP 96 G R T Q A P S S + GKA SCQ PGP L T + LAP Sbjct: 1836 GGRETGSHTLQSPAPPSSHSLARERTPLVGKAGSSCQGPGPRSRPLDTRRFSLAP 1890 Database: hs.faa Posted date: Aug 4, 2009 4:42 PM Number of letters in database: 18,247,518 Number of sequences in database: 37,866 Lambda K H 0.318 0.134 0.424 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 26,681,716 Number of Sequences: 37866 Number of extensions: 1329061 Number of successful extensions: 3423 Number of sequences better than 10.0: 18 Number of HSP's better than 10.0 without gapping: 5 Number of HSP's successfully gapped in prelim test: 13 Number of HSP's that attempted gapping in prelim test: 3406 Number of HSP's gapped (non-prelim): 30 length of query: 597 length of database: 18,247,518 effective HSP length: 108 effective length of query: 489 effective length of database: 14,157,990 effective search space: 6923257110 effective search space used: 6923257110 T: 11 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits) S2: 65 (29.6 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.