Search of human proteins with 169161845

Search of human proteins with 169161845

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|169161845 PREDICTED: similar to hCG2041495 [Homo sapiens]
         (196 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|169161845 PREDICTED: similar to hCG2041495 [Homo sapiens]          391   e-109
gi|169162310 PREDICTED: similar to hCG2041495 [Homo sapiens]          387   e-108
gi|169162679 PREDICTED: hypothetical protein LOC646377 [Homo sap...   387   e-108
gi|41282056 pyrin and HIN domain family, member 1 beta 1 isoform...   151   3e-37
gi|39540514 pyrin and HIN domain family, member 1 alpha 1 isofor...   151   3e-37
gi|41282051 pyrin and HIN domain family, member 1 beta 2 isoform...   134   5e-32
gi|41282048 pyrin and HIN domain family, member 1 alpha 2 isofor...   134   5e-32
gi|112789562 interferon, gamma-inducible protein 16 [Homo sapiens]    124   5e-29
gi|4505227 myeloid cell nuclear differentiation antigen [Homo sa...    93   2e-19
gi|4757734 absent in melanoma 2 [Homo sapiens]                         31   0.59 
gi|16933542 fibronectin 1 isoform 3 preproprotein [Homo sapiens]       28   6.5  
gi|47132557 fibronectin 1 isoform 1 preproprotein [Homo sapiens]       28   6.5  
gi|47132555 fibronectin 1 isoform 4 preproprotein [Homo sapiens]       28   6.5  
gi|47132553 fibronectin 1 isoform 5 preproprotein [Homo sapiens]       28   6.5  
gi|47132551 fibronectin 1 isoform 2 preproprotein [Homo sapiens]       28   6.5  
gi|47132549 fibronectin 1 isoform 6 preproprotein [Homo sapiens]       28   6.5  
gi|47132547 fibronectin 1 isoform 7 preproprotein [Homo sapiens]       28   6.5  
gi|54633317 thioredoxin domain containing 11 [Homo sapiens]            27   8.5  

>gi|169161845 PREDICTED: similar to hCG2041495 [Homo sapiens]
          Length = 196

 Score =  391 bits (1005), Expect = e-109
 Identities = 196/196 (100%), Positives = 196/196 (100%)

Query: 1   MNDRESGSPQNHSSFRDTPGVPCDQNEFIDKKGSTHHLQIMVSKYKNNVLLKGLEAINDY 60
           MNDRESGSPQNHSSFRDTPGVPCDQNEFIDKKGSTHHLQIMVSKYKNNVLLKGLEAINDY
Sbjct: 1   MNDRESGSPQNHSSFRDTPGVPCDQNEFIDKKGSTHHLQIMVSKYKNNVLLKGLEAINDY 60

Query: 61  HFSIINSLLINDLKLNSTRRDEYDKIQIADLMEEKFPGDAGLGKLRTLQRNTNTGRGDLA 120
           HFSIINSLLINDLKLNSTRRDEYDKIQIADLMEEKFPGDAGLGKLRTLQRNTNTGRGDLA
Sbjct: 61  HFSIINSLLINDLKLNSTRRDEYDKIQIADLMEEKFPGDAGLGKLRTLQRNTNTGRGDLA 120

Query: 121 ETLRKVKRSSALGLDVLLFSLLVVNKIKSIPAKGKTSSKKRKQRKVGPTTPLATTDKKFT 180
           ETLRKVKRSSALGLDVLLFSLLVVNKIKSIPAKGKTSSKKRKQRKVGPTTPLATTDKKFT
Sbjct: 121 ETLRKVKRSSALGLDVLLFSLLVVNKIKSIPAKGKTSSKKRKQRKVGPTTPLATTDKKFT 180

Query: 181 AEGGEETPIAQRFHTP 196
           AEGGEETPIAQRFHTP
Sbjct: 181 AEGGEETPIAQRFHTP 196


>gi|169162310 PREDICTED: similar to hCG2041495 [Homo sapiens]
          Length = 196

 Score =  387 bits (993), Expect = e-108
 Identities = 194/196 (98%), Positives = 194/196 (98%)

Query: 1   MNDRESGSPQNHSSFRDTPGVPCDQNEFIDKKGSTHHLQIMVSKYKNNVLLKGLEAINDY 60
           MNDRESGSPQNHSSFRDTPGVPCDQNEFIDKKGST HLQIMVSKYKNNVLLKGLEAINDY
Sbjct: 1   MNDRESGSPQNHSSFRDTPGVPCDQNEFIDKKGSTRHLQIMVSKYKNNVLLKGLEAINDY 60

Query: 61  HFSIINSLLINDLKLNSTRRDEYDKIQIADLMEEKFPGDAGLGKLRTLQRNTNTGRGDLA 120
           HFSIINSLLINDLKLNSTRRDEYDKIQIADLMEEKFPGDAG GKLRTLQRNTNTGRGDLA
Sbjct: 61  HFSIINSLLINDLKLNSTRRDEYDKIQIADLMEEKFPGDAGFGKLRTLQRNTNTGRGDLA 120

Query: 121 ETLRKVKRSSALGLDVLLFSLLVVNKIKSIPAKGKTSSKKRKQRKVGPTTPLATTDKKFT 180
           ETLRKVKRSSALGLDVLLFSLLVVNKIKSIPAKGKTSSKKRKQRKVGPTTPLATTDKKFT
Sbjct: 121 ETLRKVKRSSALGLDVLLFSLLVVNKIKSIPAKGKTSSKKRKQRKVGPTTPLATTDKKFT 180

Query: 181 AEGGEETPIAQRFHTP 196
           AEGGEETPIAQRFHTP
Sbjct: 181 AEGGEETPIAQRFHTP 196


>gi|169162679 PREDICTED: hypothetical protein LOC646377 [Homo
           sapiens]
          Length = 196

 Score =  387 bits (993), Expect = e-108
 Identities = 194/196 (98%), Positives = 194/196 (98%)

Query: 1   MNDRESGSPQNHSSFRDTPGVPCDQNEFIDKKGSTHHLQIMVSKYKNNVLLKGLEAINDY 60
           MNDRESGSPQNHSSFRDTPGVPCDQNEFIDKKGST HLQIMVSKYKNNVLLKGLEAINDY
Sbjct: 1   MNDRESGSPQNHSSFRDTPGVPCDQNEFIDKKGSTRHLQIMVSKYKNNVLLKGLEAINDY 60

Query: 61  HFSIINSLLINDLKLNSTRRDEYDKIQIADLMEEKFPGDAGLGKLRTLQRNTNTGRGDLA 120
           HFSIINSLLINDLKLNSTRRDEYDKIQIADLMEEKFPGDAG GKLRTLQRNTNTGRGDLA
Sbjct: 61  HFSIINSLLINDLKLNSTRRDEYDKIQIADLMEEKFPGDAGFGKLRTLQRNTNTGRGDLA 120

Query: 121 ETLRKVKRSSALGLDVLLFSLLVVNKIKSIPAKGKTSSKKRKQRKVGPTTPLATTDKKFT 180
           ETLRKVKRSSALGLDVLLFSLLVVNKIKSIPAKGKTSSKKRKQRKVGPTTPLATTDKKFT
Sbjct: 121 ETLRKVKRSSALGLDVLLFSLLVVNKIKSIPAKGKTSSKKRKQRKVGPTTPLATTDKKFT 180

Query: 181 AEGGEETPIAQRFHTP 196
           AEGGEETPIAQRFHTP
Sbjct: 181 AEGGEETPIAQRFHTP 196


>gi|41282056 pyrin and HIN domain family, member 1 beta 1 isoform
           [Homo sapiens]
          Length = 461

 Score =  151 bits (382), Expect = 3e-37
 Identities = 87/156 (55%), Positives = 100/156 (64%), Gaps = 14/156 (8%)

Query: 41  MVSKYKNNVLLKGLEAINDYHFSIINSLLINDLKLNSTRRDEYDKIQIADLMEEKFPGDA 100
           M + YK  VLLKGLE INDYHF I+ SLL NDLKLN   ++EYDKIQIADLMEEKFPGDA
Sbjct: 1   MANNYKKIVLLKGLEVINDYHFRIVKSLLSNDLKLNPKMKEEYDKIQIADLMEEKFPGDA 60

Query: 101 GLGKLRTLQRNTNTGRGDLAETLRKVKRSSALGLDVLLFSLLVVNKIKSIPAKGKTSSKK 160
           GLGKL    +   T  GDLAETL++ K             L V NKI+SIP KG   SKK
Sbjct: 61  GLGKLIEFFKEIPT-LGDLAETLKREK-------------LKVANKIESIPVKGIIPSKK 106

Query: 161 RKQRKVGPTTPLATTDKKFTAEGGEETPIAQRFHTP 196
            KQ++V P TP  T   + TA+G EET   Q+   P
Sbjct: 107 TKQKEVYPATPACTPSNRLTAKGAEETLGPQKRKKP 142


>gi|39540514 pyrin and HIN domain family, member 1 alpha 1 isoform
           [Homo sapiens]
          Length = 492

 Score =  151 bits (382), Expect = 3e-37
 Identities = 87/156 (55%), Positives = 100/156 (64%), Gaps = 14/156 (8%)

Query: 41  MVSKYKNNVLLKGLEAINDYHFSIINSLLINDLKLNSTRRDEYDKIQIADLMEEKFPGDA 100
           M + YK  VLLKGLE INDYHF I+ SLL NDLKLN   ++EYDKIQIADLMEEKFPGDA
Sbjct: 1   MANNYKKIVLLKGLEVINDYHFRIVKSLLSNDLKLNPKMKEEYDKIQIADLMEEKFPGDA 60

Query: 101 GLGKLRTLQRNTNTGRGDLAETLRKVKRSSALGLDVLLFSLLVVNKIKSIPAKGKTSSKK 160
           GLGKL    +   T  GDLAETL++ K             L V NKI+SIP KG   SKK
Sbjct: 61  GLGKLIEFFKEIPT-LGDLAETLKREK-------------LKVANKIESIPVKGIIPSKK 106

Query: 161 RKQRKVGPTTPLATTDKKFTAEGGEETPIAQRFHTP 196
            KQ++V P TP  T   + TA+G EET   Q+   P
Sbjct: 107 TKQKEVYPATPACTPSNRLTAKGAEETLGPQKRKKP 142


>gi|41282051 pyrin and HIN domain family, member 1 beta 2 isoform
           [Homo sapiens]
          Length = 452

 Score =  134 bits (337), Expect = 5e-32
 Identities = 79/156 (50%), Positives = 92/156 (58%), Gaps = 23/156 (14%)

Query: 41  MVSKYKNNVLLKGLEAINDYHFSIINSLLINDLKLNSTRRDEYDKIQIADLMEEKFPGDA 100
           M + YK  VLLKGLE INDYHF I+ SLL NDLKLN   ++EYDKIQIADLMEEKFPGDA
Sbjct: 1   MANNYKKIVLLKGLEVINDYHFRIVKSLLSNDLKLNPKMKEEYDKIQIADLMEEKFPGDA 60

Query: 101 GLGKLRTLQRNTNTGRGDLAETLRKVKRSSALGLDVLLFSLLVVNKIKSIPAKGKTSSKK 160
           GLGKL    +   T  GDLAETL++ K                      +  KG   SKK
Sbjct: 61  GLGKLIEFFKEIPT-LGDLAETLKREK----------------------LKVKGIIPSKK 97

Query: 161 RKQRKVGPTTPLATTDKKFTAEGGEETPIAQRFHTP 196
            KQ++V P TP  T   + TA+G EET   Q+   P
Sbjct: 98  TKQKEVYPATPACTPSNRLTAKGAEETLGPQKRKKP 133


>gi|41282048 pyrin and HIN domain family, member 1 alpha 2 isoform
           [Homo sapiens]
          Length = 483

 Score =  134 bits (337), Expect = 5e-32
 Identities = 79/156 (50%), Positives = 92/156 (58%), Gaps = 23/156 (14%)

Query: 41  MVSKYKNNVLLKGLEAINDYHFSIINSLLINDLKLNSTRRDEYDKIQIADLMEEKFPGDA 100
           M + YK  VLLKGLE INDYHF I+ SLL NDLKLN   ++EYDKIQIADLMEEKFPGDA
Sbjct: 1   MANNYKKIVLLKGLEVINDYHFRIVKSLLSNDLKLNPKMKEEYDKIQIADLMEEKFPGDA 60

Query: 101 GLGKLRTLQRNTNTGRGDLAETLRKVKRSSALGLDVLLFSLLVVNKIKSIPAKGKTSSKK 160
           GLGKL    +   T  GDLAETL++ K                      +  KG   SKK
Sbjct: 61  GLGKLIEFFKEIPT-LGDLAETLKREK----------------------LKVKGIIPSKK 97

Query: 161 RKQRKVGPTTPLATTDKKFTAEGGEETPIAQRFHTP 196
            KQ++V P TP  T   + TA+G EET   Q+   P
Sbjct: 98  TKQKEVYPATPACTPSNRLTAKGAEETLGPQKRKKP 133


>gi|112789562 interferon, gamma-inducible protein 16 [Homo sapiens]
          Length = 729

 Score =  124 bits (311), Expect = 5e-29
 Identities = 77/152 (50%), Positives = 90/152 (59%), Gaps = 24/152 (15%)

Query: 41  MVSKYKNNVLLKGLEAINDYHFSIINSLLINDLKLNSTRRDEYDKIQIADLMEEKFPGDA 100
           M  KYKN VLLKGLE INDYHF ++ SLL NDLKLN   R+EYDKIQIADLMEEKF GDA
Sbjct: 1   MGKKYKNIVLLKGLEVINDYHFRMVKSLLSNDLKLNLKMREEYDKIQIADLMEEKFRGDA 60

Query: 101 GLGKLRTLQRNTNTGRGDLAETLRKVKRSSALGLDVLLFSLLVVNKIKSIPAKGKTSSKK 160
           GLGKL  +  +  T   DLAETL+K K                      +  KG   S+K
Sbjct: 61  GLGKLIKIFEDIPT-LEDLAETLKKEK----------------------LKVKGPALSRK 97

Query: 161 RKQRKVGPTTPLATTDKKFTAEGGEETPIAQR 192
           RK ++V  T+P  +T      EG E TP AQ+
Sbjct: 98  RK-KEVDATSPAPSTSSTVKTEGAEATPGAQK 128


>gi|4505227 myeloid cell nuclear differentiation antigen [Homo
           sapiens]
          Length = 407

 Score = 92.8 bits (229), Expect = 2e-19
 Identities = 60/156 (38%), Positives = 83/156 (53%), Gaps = 17/156 (10%)

Query: 41  MVSKYKNNVLLKGLEAINDYHFSIINSLLINDLKLNSTRRDEYDKIQIADLMEEKFPGDA 100
           MV++YK  +LLKG E ++DYHF+ I SLL  DL L +  ++EY++I+I DLME+KF G A
Sbjct: 1   MVNEYKKILLLKGFELMDDYHFTSIKSLLAYDLGLTTKMQEEYNRIKITDLMEKKFQGVA 60

Query: 101 GLGKLRTLQRNTNTGRGDLAETLRKVKRSSALGLDVLLFSLLVVNKIKSIPAKGKTSSKK 160
            L KL  L ++  + + +L   LRK K   A                K I  + K   KK
Sbjct: 61  CLDKLIELAKDMPSLK-NLVNNLRKEKSKVA----------------KKIKTQEKAPVKK 103

Query: 161 RKQRKVGPTTPLATTDKKFTAEGGEETPIAQRFHTP 196
             Q +VG   P  T   K T+E     P+AQ+  TP
Sbjct: 104 INQEEVGLAAPAPTARNKLTSEARGRIPVAQKRKTP 139


>gi|4757734 absent in melanoma 2 [Homo sapiens]
          Length = 343

 Score = 31.2 bits (69), Expect = 0.59
 Identities = 17/52 (32%), Positives = 27/52 (51%)

Query: 41 MVSKYKNNVLLKGLEAINDYHFSIINSLLINDLKLNSTRRDEYDKIQIADLM 92
          M SKYK  +LL GL+ I D         L ++  + + +    ++IQ+A LM
Sbjct: 1  MESKYKEILLLTGLDNITDEELDRFKFFLSDEFNIATGKLHTANRIQVATLM 52


>gi|16933542 fibronectin 1 isoform 3 preproprotein [Homo sapiens]
          Length = 2355

 Score = 27.7 bits (60), Expect = 6.5
 Identities = 10/30 (33%), Positives = 20/30 (66%)

Query: 149 SIPAKGKTSSKKRKQRKVGPTTPLATTDKK 178
           ++P+ G + SK++ Q+ V P +P+A +  K
Sbjct: 20  AVPSTGASKSKRQAQQMVQPQSPVAVSQSK 49


>gi|47132557 fibronectin 1 isoform 1 preproprotein [Homo sapiens]
          Length = 2477

 Score = 27.7 bits (60), Expect = 6.5
 Identities = 10/30 (33%), Positives = 20/30 (66%)

Query: 149 SIPAKGKTSSKKRKQRKVGPTTPLATTDKK 178
           ++P+ G + SK++ Q+ V P +P+A +  K
Sbjct: 20  AVPSTGASKSKRQAQQMVQPQSPVAVSQSK 49


>gi|47132555 fibronectin 1 isoform 4 preproprotein [Homo sapiens]
          Length = 2330

 Score = 27.7 bits (60), Expect = 6.5
 Identities = 10/30 (33%), Positives = 20/30 (66%)

Query: 149 SIPAKGKTSSKKRKQRKVGPTTPLATTDKK 178
           ++P+ G + SK++ Q+ V P +P+A +  K
Sbjct: 20  AVPSTGASKSKRQAQQMVQPQSPVAVSQSK 49


>gi|47132553 fibronectin 1 isoform 5 preproprotein [Homo sapiens]
          Length = 2296

 Score = 27.7 bits (60), Expect = 6.5
 Identities = 10/30 (33%), Positives = 20/30 (66%)

Query: 149 SIPAKGKTSSKKRKQRKVGPTTPLATTDKK 178
           ++P+ G + SK++ Q+ V P +P+A +  K
Sbjct: 20  AVPSTGASKSKRQAQQMVQPQSPVAVSQSK 49


>gi|47132551 fibronectin 1 isoform 2 preproprotein [Homo sapiens]
          Length = 2421

 Score = 27.7 bits (60), Expect = 6.5
 Identities = 10/30 (33%), Positives = 20/30 (66%)

Query: 149 SIPAKGKTSSKKRKQRKVGPTTPLATTDKK 178
           ++P+ G + SK++ Q+ V P +P+A +  K
Sbjct: 20  AVPSTGASKSKRQAQQMVQPQSPVAVSQSK 49


>gi|47132549 fibronectin 1 isoform 6 preproprotein [Homo sapiens]
          Length = 2176

 Score = 27.7 bits (60), Expect = 6.5
 Identities = 10/30 (33%), Positives = 20/30 (66%)

Query: 149 SIPAKGKTSSKKRKQRKVGPTTPLATTDKK 178
           ++P+ G + SK++ Q+ V P +P+A +  K
Sbjct: 20  AVPSTGASKSKRQAQQMVQPQSPVAVSQSK 49


>gi|47132547 fibronectin 1 isoform 7 preproprotein [Homo sapiens]
          Length = 657

 Score = 27.7 bits (60), Expect = 6.5
 Identities = 10/30 (33%), Positives = 20/30 (66%)

Query: 149 SIPAKGKTSSKKRKQRKVGPTTPLATTDKK 178
           ++P+ G + SK++ Q+ V P +P+A +  K
Sbjct: 20  AVPSTGASKSKRQAQQMVQPQSPVAVSQSK 49


>gi|54633317 thioredoxin domain containing 11 [Homo sapiens]
          Length = 958

 Score = 27.3 bits (59), Expect = 8.5
 Identities = 38/168 (22%), Positives = 72/168 (42%), Gaps = 18/168 (10%)

Query: 6   SGSPQNHSSFRDTPGVPCDQNEFIDKKGSTHHLQIMVSKYKNNVLLKGLEAINDYHFSII 65
           + SPQN ++   +P   C Q+E + ++G   HL+  + K +  +             S+ 
Sbjct: 774 ASSPQNVAN---SPTKECLQSEAVLQRGHISHLEREIQKLRAEI------------SSLQ 818

Query: 66  NSLLINDLKLNSTRRDEYDKIQIADLMEEKFP-GDAGLGKLRTLQRNTNTGRGDLAETLR 124
            + +  + +L+S RRDE+   Q    +EE+     A   +L+ L         +LA  L+
Sbjct: 819 RAQVQVESQLSSARRDEHRLRQQQRALEEQHSLLHAHSEQLQALYEQKTRELQELARKLQ 878

Query: 125 KVKRSSA-LGLDVLLFSLLVVNKIKSIPAKGKTSSKKRKQRKVGPTTP 171
           ++  +S  L  +     +LV    + +  +    S    QR+V P  P
Sbjct: 879 ELADASENLLTENTWLKILVATMERKLEGRDGAES-LAAQREVHPKQP 925


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.314    0.132    0.369 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 7,223,334
Number of Sequences: 37866
Number of extensions: 284802
Number of successful extensions: 636
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 613
Number of HSP's gapped (non-prelim): 18
length of query: 196
length of database: 18,247,518
effective HSP length: 97
effective length of query: 99
effective length of database: 14,574,516
effective search space: 1442877084
effective search space used: 1442877084
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 59 (27.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.