Search of human proteins with 164698438

Search of human proteins with 164698438

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|164698438 thymidine kinase 1 [Homo sapiens]
         (234 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|164698438 thymidine kinase 1 [Homo sapiens]                        474   e-134
gi|47132529 suppression of tumorigenicity 5 isoform 1 [Homo sapi...    32   0.36 
gi|47132532 suppression of tumorigenicity 5 isoform 1 [Homo sapi...    32   0.36 
gi|164663830 FGGY carbohydrate kinase domain containing isoform ...    30   1.4  
gi|164663828 FGGY carbohydrate kinase domain containing isoform ...    30   1.4  
gi|237858799 adenylate kinase domain containing 1 isoform 1 [Hom...    29   3.0  
gi|169162466 PREDICTED: similar to hCG1644589 [Homo sapiens]           28   5.2  
gi|169162197 PREDICTED: similar to hCG1644589 [Homo sapiens]           28   5.2  
gi|169161235 PREDICTED: hypothetical protein LOC390998 [Homo sap...    28   5.2  
gi|21265052 ADAM metallopeptidase with thrombospondin type 1 mot...    28   5.2  
gi|110611167 ADAM metallopeptidase with thrombospondin type 1 mo...    28   5.2  
gi|4507605 tumor necrosis factor ligand superfamily, member 7 [H...    28   8.9  
gi|9506797 adaptor-related protein complex 1, mu 2 subunit [Homo...    28   8.9  

>gi|164698438 thymidine kinase 1 [Homo sapiens]
          Length = 234

 Score =  474 bits (1219), Expect = e-134
 Identities = 234/234 (100%), Positives = 234/234 (100%)

Query: 1   MSCINLPTVLPGSPSKTRGQIQVILGPMFSGKSTELMRRVRRFQIAQYKCLVIKYAKDTR 60
           MSCINLPTVLPGSPSKTRGQIQVILGPMFSGKSTELMRRVRRFQIAQYKCLVIKYAKDTR
Sbjct: 1   MSCINLPTVLPGSPSKTRGQIQVILGPMFSGKSTELMRRVRRFQIAQYKCLVIKYAKDTR 60

Query: 61  YSSSFCTHDRNTMEALPACLLRDVAQEALGVAVIGIDEGQFFPDIVEFCEAMANAGKTVI 120
           YSSSFCTHDRNTMEALPACLLRDVAQEALGVAVIGIDEGQFFPDIVEFCEAMANAGKTVI
Sbjct: 61  YSSSFCTHDRNTMEALPACLLRDVAQEALGVAVIGIDEGQFFPDIVEFCEAMANAGKTVI 120

Query: 121 VAALDGTFQRKPFGAILNLVPLAESVVKLTAVCMECFREAAYTKRLGTEKEVEVIGGADK 180
           VAALDGTFQRKPFGAILNLVPLAESVVKLTAVCMECFREAAYTKRLGTEKEVEVIGGADK
Sbjct: 121 VAALDGTFQRKPFGAILNLVPLAESVVKLTAVCMECFREAAYTKRLGTEKEVEVIGGADK 180

Query: 181 YHSVCRLCYFKKASGQPAGPDNKENCPVPGKPGEAVAARKLFAPQQILQCSPAN 234
           YHSVCRLCYFKKASGQPAGPDNKENCPVPGKPGEAVAARKLFAPQQILQCSPAN
Sbjct: 181 YHSVCRLCYFKKASGQPAGPDNKENCPVPGKPGEAVAARKLFAPQQILQCSPAN 234


>gi|47132529 suppression of tumorigenicity 5 isoform 1 [Homo
           sapiens]
          Length = 1137

 Score = 32.3 bits (72), Expect = 0.36
 Identities = 30/133 (22%), Positives = 52/133 (39%), Gaps = 8/133 (6%)

Query: 97  DEGQFFPDIVEFCEAMANAGKTVIVAALDGTFQRKPFGAILNLVPLAESVVK------LT 150
           +EG+  P    F       G++   A L G   RK   A+L+ +   E V+K      L 
Sbjct: 242 EEGEALPVRDSFYRLEKRLGRSEPSAFLRGHGSRKESSAVLSRIQKIEQVLKEQPGRGLP 301

Query: 151 AVCMECFREAAYTKRLGTEKEVEVIGGADKYHSVCRLCYFKKASGQPAGPDNKE--NCPV 208
            +   C+      ++ GT   +E   G     +  R       +G+   P  +E      
Sbjct: 302 QLPSSCYSVDRGKRKTGTLGSLEEPAGGASVSAGSRAVGVAGVAGEAGPPPEREGSGSTK 361

Query: 209 PGKPGEAVAARKL 221
           PG PG + ++++L
Sbjct: 362 PGTPGNSPSSQRL 374


>gi|47132532 suppression of tumorigenicity 5 isoform 1 [Homo
           sapiens]
          Length = 1137

 Score = 32.3 bits (72), Expect = 0.36
 Identities = 30/133 (22%), Positives = 52/133 (39%), Gaps = 8/133 (6%)

Query: 97  DEGQFFPDIVEFCEAMANAGKTVIVAALDGTFQRKPFGAILNLVPLAESVVK------LT 150
           +EG+  P    F       G++   A L G   RK   A+L+ +   E V+K      L 
Sbjct: 242 EEGEALPVRDSFYRLEKRLGRSEPSAFLRGHGSRKESSAVLSRIQKIEQVLKEQPGRGLP 301

Query: 151 AVCMECFREAAYTKRLGTEKEVEVIGGADKYHSVCRLCYFKKASGQPAGPDNKE--NCPV 208
            +   C+      ++ GT   +E   G     +  R       +G+   P  +E      
Sbjct: 302 QLPSSCYSVDRGKRKTGTLGSLEEPAGGASVSAGSRAVGVAGVAGEAGPPPEREGSGSTK 361

Query: 209 PGKPGEAVAARKL 221
           PG PG + ++++L
Sbjct: 362 PGTPGNSPSSQRL 374


>gi|164663830 FGGY carbohydrate kinase domain containing isoform a
           [Homo sapiens]
          Length = 575

 Score = 30.4 bits (67), Expect = 1.4
 Identities = 18/65 (27%), Positives = 27/65 (41%)

Query: 76  LPACLLRDVAQEALGVAVIGIDEGQFFPDIVEFCEAMANAGKTVIVAALDGTFQRKPFGA 135
           +P  L ++V    +G AV+G      F  + E    M+  GK V     D  +  K +  
Sbjct: 498 MPVVLSQEVESVLVGAAVLGACASGDFASVQEAMAKMSKVGKVVFPRLQDKKYYDKKYQV 557

Query: 136 ILNLV 140
            L LV
Sbjct: 558 FLKLV 562


>gi|164663828 FGGY carbohydrate kinase domain containing isoform b
           [Homo sapiens]
          Length = 551

 Score = 30.4 bits (67), Expect = 1.4
 Identities = 18/65 (27%), Positives = 27/65 (41%)

Query: 76  LPACLLRDVAQEALGVAVIGIDEGQFFPDIVEFCEAMANAGKTVIVAALDGTFQRKPFGA 135
           +P  L ++V    +G AV+G      F  + E    M+  GK V     D  +  K +  
Sbjct: 474 MPVVLSQEVESVLVGAAVLGACASGDFASVQEAMAKMSKVGKVVFPRLQDKKYYDKKYQV 533

Query: 136 ILNLV 140
            L LV
Sbjct: 534 FLKLV 538


>gi|237858799 adenylate kinase domain containing 1 isoform 1 [Homo
           sapiens]
          Length = 1911

 Score = 29.3 bits (64), Expect = 3.0
 Identities = 24/82 (29%), Positives = 37/82 (45%), Gaps = 12/82 (14%)

Query: 10  LPGSPSKTRGQIQVILGPMFSGKSTELMRRVRRFQIAQYKCLVIKYAK--DTRYSSSFCT 67
           +PG P K       ILGP +SGK+T     +       YK  V+ YA+    R+  +  T
Sbjct: 387 MPGPPCKV-----FILGPQYSGKTT-----LCNMLAENYKGKVVDYAQLVQPRFDKARET 436

Query: 68  HDRNTMEALPACLLRDVAQEAL 89
              NT+    A  ++ V ++ L
Sbjct: 437 LVENTIAEATAAAIKVVKEKLL 458


>gi|169162466 PREDICTED: similar to hCG1644589 [Homo sapiens]
          Length = 150

 Score = 28.5 bits (62), Expect = 5.2
 Identities = 14/36 (38%), Positives = 20/36 (55%), Gaps = 3/36 (8%)

Query: 192 KASGQPAGPD---NKENCPVPGKPGEAVAARKLFAP 224
           +A G  AGPD      + PVPG+P   ++ R+  AP
Sbjct: 3   QARGAQAGPDPTNRAADAPVPGQPSAELSRRRPLAP 38


>gi|169162197 PREDICTED: similar to hCG1644589 [Homo sapiens]
          Length = 150

 Score = 28.5 bits (62), Expect = 5.2
 Identities = 14/36 (38%), Positives = 20/36 (55%), Gaps = 3/36 (8%)

Query: 192 KASGQPAGPD---NKENCPVPGKPGEAVAARKLFAP 224
           +A G  AGPD      + PVPG+P   ++ R+  AP
Sbjct: 3   QARGAQAGPDPTNRAADAPVPGQPSAELSRRRPLAP 38


>gi|169161235 PREDICTED: hypothetical protein LOC390998 [Homo
           sapiens]
          Length = 150

 Score = 28.5 bits (62), Expect = 5.2
 Identities = 14/36 (38%), Positives = 20/36 (55%), Gaps = 3/36 (8%)

Query: 192 KASGQPAGPD---NKENCPVPGKPGEAVAARKLFAP 224
           +A G  AGPD      + PVPG+P   ++ R+  AP
Sbjct: 3   QARGAQAGPDPTNRAADAPVPGQPSAELSRRRPLAP 38


>gi|21265052 ADAM metallopeptidase with thrombospondin type 1 motif,
            14 isoform 2 preproprotein [Homo sapiens]
          Length = 1223

 Score = 28.5 bits (62), Expect = 5.2
 Identities = 17/47 (36%), Positives = 21/47 (44%), Gaps = 9/47 (19%)

Query: 181  YHSVCRLCYFKKASGQPAGPD---------NKENCPVPGKPGEAVAA 218
            YH +C +   KKASG   GPD         +    P+PG    A AA
Sbjct: 1085 YHRLCCVSCIKKASGPNPGPDPGPTSLPPFSTPGSPLPGPQDPADAA 1131


>gi|110611167 ADAM metallopeptidase with thrombospondin type 1 motif,
            14 isoform 1 preproprotein [Homo sapiens]
          Length = 1226

 Score = 28.5 bits (62), Expect = 5.2
 Identities = 17/47 (36%), Positives = 21/47 (44%), Gaps = 9/47 (19%)

Query: 181  YHSVCRLCYFKKASGQPAGPD---------NKENCPVPGKPGEAVAA 218
            YH +C +   KKASG   GPD         +    P+PG    A AA
Sbjct: 1088 YHRLCCVSCIKKASGPNPGPDPGPTSLPPFSTPGSPLPGPQDPADAA 1134


>gi|4507605 tumor necrosis factor ligand superfamily, member 7 [Homo
           sapiens]
          Length = 193

 Score = 27.7 bits (60), Expect = 8.9
 Identities = 13/34 (38%), Positives = 21/34 (61%), Gaps = 2/34 (5%)

Query: 129 QRKPFGAILN--LVPLAESVVKLTAVCMECFREA 160
           +R+P+G +L   LVPL   +V    VC++ F +A
Sbjct: 11  RRRPYGCVLRAALVPLVAGLVICLVVCIQRFAQA 44


>gi|9506797 adaptor-related protein complex 1, mu 2 subunit [Homo
           sapiens]
          Length = 423

 Score = 27.7 bits (60), Expect = 8.9
 Identities = 17/80 (21%), Positives = 37/80 (46%), Gaps = 7/80 (8%)

Query: 58  DTRYSSSFCTHDRNTMEA----LPACLLRDVAQEALGVAVIGIDEGQFFPDIVEFCEAMA 113
           D++    + T   N +E     +P  +   V+  + G+      + + F D++E    + 
Sbjct: 127 DSKILQEYITQQSNKLETGKSRVPPTVTNAVSWRSEGIKY---KKNEVFIDVIESVNLLV 183

Query: 114 NAGKTVIVAALDGTFQRKPF 133
           NA  +V+++ + GT + K F
Sbjct: 184 NANGSVLLSEIVGTIKLKVF 203


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.322    0.136    0.410 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 9,488,607
Number of Sequences: 37866
Number of extensions: 416516
Number of successful extensions: 998
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 10
Number of HSP's that attempted gapping in prelim test: 995
Number of HSP's gapped (non-prelim): 13
length of query: 234
length of database: 18,247,518
effective HSP length: 99
effective length of query: 135
effective length of database: 14,498,784
effective search space: 1957335840
effective search space used: 1957335840
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 60 (27.7 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.