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Search of human proteins with 156564359
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|156564359 hypothetical protein LOC113278 [Homo sapiens]
(469 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|156564359 hypothetical protein LOC113278 [Homo sapiens] 947 0.0
gi|13375682 G protein-coupled receptor 172A [Homo sapiens] 309 4e-84
gi|157388953 G protein-coupled receptor 172B [Homo sapiens] 300 1e-81
gi|157388951 G protein-coupled receptor 172B [Homo sapiens] 300 1e-81
gi|38708299 solute carrier family 29 (nucleoside transporters), ... 36 0.086
gi|189027121 solute carrier family 35, member F1 [Homo sapiens] 32 0.95
gi|116268113 transmembrane protein 99 [Homo sapiens] 32 1.2
gi|50843827 activating molecule in beclin-1-regulated autophagy ... 31 2.1
gi|89353783 coagulation factor II (thrombin) receptor-like 3 pre... 30 3.6
gi|223634014 solute carrier organic anion transporter family, me... 30 4.7
gi|223634012 solute carrier organic anion transporter family, me... 30 4.7
gi|6005820 solute carrier organic anion transporter family, memb... 30 4.7
>gi|156564359 hypothetical protein LOC113278 [Homo sapiens]
Length = 469
Score = 947 bits (2447), Expect = 0.0
Identities = 469/469 (100%), Positives = 469/469 (100%)
Query: 1 MAFLMHLLVCVFGMGSWVTINGLWVELPLLVMELPEGWYLPSYLTVVIQLANIGPLLVTL 60
MAFLMHLLVCVFGMGSWVTINGLWVELPLLVMELPEGWYLPSYLTVVIQLANIGPLLVTL
Sbjct: 1 MAFLMHLLVCVFGMGSWVTINGLWVELPLLVMELPEGWYLPSYLTVVIQLANIGPLLVTL 60
Query: 61 LHHFRPSCLSEVPIIFTLLGVGTVTCIIFAFLWNMTSWVLDGHHSIAFLVLTFFLALVDC 120
LHHFRPSCLSEVPIIFTLLGVGTVTCIIFAFLWNMTSWVLDGHHSIAFLVLTFFLALVDC
Sbjct: 61 LHHFRPSCLSEVPIIFTLLGVGTVTCIIFAFLWNMTSWVLDGHHSIAFLVLTFFLALVDC 120
Query: 121 TSSVTFLPFMSRLPTYYLTTFFVGEGLSGLLPALVALAQGSGLTTCVNVTEISDSVPSPV 180
TSSVTFLPFMSRLPTYYLTTFFVGEGLSGLLPALVALAQGSGLTTCVNVTEISDSVPSPV
Sbjct: 121 TSSVTFLPFMSRLPTYYLTTFFVGEGLSGLLPALVALAQGSGLTTCVNVTEISDSVPSPV 180
Query: 181 PTRETDIAQGVPRALVSALPGMEAPLSHLESRYLPAHFSPLVFFLLLSIMMACCLVAFFV 240
PTRETDIAQGVPRALVSALPGMEAPLSHLESRYLPAHFSPLVFFLLLSIMMACCLVAFFV
Sbjct: 181 PTRETDIAQGVPRALVSALPGMEAPLSHLESRYLPAHFSPLVFFLLLSIMMACCLVAFFV 240
Query: 241 LQRQPRCWEASVEDLLNDQVTLHSIRPREENDLGPAGTVDSSQGQGYLEEKAAPCCPAHL 300
LQRQPRCWEASVEDLLNDQVTLHSIRPREENDLGPAGTVDSSQGQGYLEEKAAPCCPAHL
Sbjct: 241 LQRQPRCWEASVEDLLNDQVTLHSIRPREENDLGPAGTVDSSQGQGYLEEKAAPCCPAHL 300
Query: 301 AFIYTLVAFVNALTNGMLPSVQTYSCLSYGPVAYHLAATLSIVANPLASLVSMFLPNRSL 360
AFIYTLVAFVNALTNGMLPSVQTYSCLSYGPVAYHLAATLSIVANPLASLVSMFLPNRSL
Sbjct: 301 AFIYTLVAFVNALTNGMLPSVQTYSCLSYGPVAYHLAATLSIVANPLASLVSMFLPNRSL 360
Query: 361 LFLGVLSVLGTCFGGYNMAMAVMSPCPLLQGHWGGEVLIVASWVLFSGCLSYVKVMLGVV 420
LFLGVLSVLGTCFGGYNMAMAVMSPCPLLQGHWGGEVLIVASWVLFSGCLSYVKVMLGVV
Sbjct: 361 LFLGVLSVLGTCFGGYNMAMAVMSPCPLLQGHWGGEVLIVASWVLFSGCLSYVKVMLGVV 420
Query: 421 LRDLSRSALLWCGAAVQLGSLLGALLMFPLVNVLRLFSSADFCNLHCPA 469
LRDLSRSALLWCGAAVQLGSLLGALLMFPLVNVLRLFSSADFCNLHCPA
Sbjct: 421 LRDLSRSALLWCGAAVQLGSLLGALLMFPLVNVLRLFSSADFCNLHCPA 469
>gi|13375682 G protein-coupled receptor 172A [Homo sapiens]
Length = 445
Score = 309 bits (791), Expect = 4e-84
Identities = 195/473 (41%), Positives = 253/473 (53%), Gaps = 49/473 (10%)
Query: 4 LMHLLVCVFGMGSWVTINGLWVELPLLVMELPEGWYLPSYLTVVIQLANIGPLLVTLLHH 63
L HLLV +FGMGSW +NG+WVELP++V ELPEGW LPSY++V++ L N+G L+VTL
Sbjct: 11 LTHLLVALFGMGSWAAVNGIWVELPVVVKELPEGWSLPSYVSVLVALGNLGLLVVTLWRR 70
Query: 64 FRPSCLSEVPIIFTLLGVGTVTCIIFAFLWNMTSWVLDGHHSIAFLVLTFFLALVDCTSS 123
P +VPI + +G V + A LW+ + V HS+AFL L F LAL C S+
Sbjct: 71 LAPGKDEQVPIRVVQV-LGMVGTALLASLWHHVAPVAGQLHSVAFLALAFVLALACCASN 129
Query: 124 VTFLPFMSRLPTYYLTTFFVGEGLSGLLPALVALAQGSGLTTCVNVTEISDSVPSPVPTR 183
VTFLPF+S LP +L +FF+G+GLS LLP ++AL QG G C
Sbjct: 130 VTFLPFLSHLPPRFLRSFFLGQGLSALLPCVLALVQGVGRLEC----------------- 172
Query: 184 ETDIAQGVPRALVSALPGMEAPLSHLESRYLPAHFSPLVFFLLLSIMMACCLVAF----F 239
P A ++ PG PL LE F FF L+ ++ AF
Sbjct: 173 --------PPAPINGTPG--PPLDFLE------RFPASTFFWALTALLVASAAAFQGLLL 216
Query: 240 VLQRQPRCWEASVEDLLN-----DQVTLHSIRPREENDLGPAGTVDSSQGQGYLEEKAAP 294
+L P + L + + P +E AGT + Y A
Sbjct: 217 LLPPPPSVPTGELGSGLQVGAPGAEEEVEESSPLQEPPSQAAGTTPGPDPKAYQLLSARS 276
Query: 295 CCPAHLAFIYTLVAFVNALTNGMLPSVQTYSCLSYGPVAYHLAATLSIVANPLASLVSMF 354
C + L+A NALTNG+LP+VQ++SCL YG +AYHLA L ANPLA ++M
Sbjct: 277 AC------LLGLLAATNALTNGVLPAVQSFSCLPYGRLAYHLAVVLGSAANPLACFLAMG 330
Query: 355 LPNRSLLFLGVLSVLGTCFGGYNMAMAVMSPCPLLQGHWGGEVLIVASWVLFSGCLSYVK 414
+ RSL LG LS+LG GGY MA+AV+SPCP L G G VL+V SWVL G SYVK
Sbjct: 331 VLCRSLAGLGGLSLLGVFCGGYLMALAVLSPCPPLVGTSAGVVLVVLSWVLCLGVFSYVK 390
Query: 415 VMLGVVLRDLSRSALLWCGAAVQLGSLLGALLMFPLVNVLRLFSSADFCNLHC 467
V +L R ALL G A+Q+GSLLGA+ MFP ++ +F S C C
Sbjct: 391 VAASSLLHGGGRPALLAAGVAIQVGSLLGAVAMFPPTSIYHVFHSRKDCADPC 443
>gi|157388953 G protein-coupled receptor 172B [Homo sapiens]
Length = 448
Score = 300 bits (769), Expect = 1e-81
Identities = 194/474 (40%), Positives = 251/474 (52%), Gaps = 56/474 (11%)
Query: 4 LMHLLVCVFGMGSWVTINGLWVELPLLVMELPEGWYLPSYLTVVIQLANIGPLLVTLLHH 63
L HLLV +FGMGSW +NG+WVELP++V +LPEGW LPSYL+VV+ L N+G L+VTL
Sbjct: 11 LTHLLVALFGMGSWAAVNGIWVELPVVVKDLPEGWSLPSYLSVVVALGNLGLLVVTLWRQ 70
Query: 64 FRPSCLSEVPI--IFTLLGVGTVTCIIFAFLWNMTSWVLDGHHSIAFLVLTFFLALVDCT 121
P +VPI + L VGT + A LW+ + V HS+AFL L LA+ CT
Sbjct: 71 LAPGKGEQVPIQVVQVLSVVGTA---LLAPLWHHVAPVAGQLHSVAFLTLALVLAMACCT 127
Query: 122 SSVTFLPFMSRLPTYYLTTFFVGEGLSGLLPALVALAQGSGLTTCVNVTEISDSVPSPVP 181
S+VTFLPF+S LP +L +FF+G+GLS LLP ++AL QG G C P P
Sbjct: 128 SNVTFLPFLSHLPPPFLRSFFLGQGLSALLPCVLALVQGVGRLEC-----------PPAP 176
Query: 182 TRETDIAQGVPRALVSALPGMEAPLSHLESRYLPAHFSPLVFFLLLSIMMACCLVAF--- 238
T T PL P F FF L+ ++ AF
Sbjct: 177 TNGTS----------------GPPLD------FPERFPASTFFWALTALLVTSAAAFRGL 214
Query: 239 -FVLQRQPRCWEASVEDLL--------NDQVTLHSIRPREENDLGPAGTVDSSQGQGYLE 289
+L P L ++ P +E AGT+ +
Sbjct: 215 LLLLPSLPSVTTGGSGPELQLGSPGAEEEEKEEEEALPLQEPPSQAAGTIPGP------D 268
Query: 290 EKAAPCCPAHLAFIYTLVAFVNALTNGMLPSVQTYSCLSYGPVAYHLAATLSIVANPLAS 349
+A AH AF+ L+AF +A+TNG+LPSVQ++SCL YG +AYHLA L ANPLA
Sbjct: 269 PEAHQLFSAHGAFLLGLMAFTSAVTNGVLPSVQSFSCLPYGRLAYHLAVVLGSAANPLAC 328
Query: 350 LVSMFLPNRSLLFLGVLSVLGTCFGGYNMAMAVMSPCPLLQGHWGGEVLIVASWVLFSGC 409
++M + RSL L LS+LG FG Y MA+A++SPCP L G G VL+V SWVL
Sbjct: 329 FLAMGVLCRSLAGLVGLSLLGMLFGAYLMALAILSPCPPLVGTTAGVVLVVLSWVLCLCV 388
Query: 410 LSYVKVMLGVVLRDLSRSALLWCGAAVQLGSLLGALLMFPLVNVLRLFSSADFC 463
SYVKV +L R ALL G A+Q+GSLLGA MFP ++ +F S C
Sbjct: 389 FSYVKVAASSLLHGGGRPALLAAGVAIQVGSLLGAGAMFPPTSIYHVFQSRKDC 442
>gi|157388951 G protein-coupled receptor 172B [Homo sapiens]
Length = 448
Score = 300 bits (769), Expect = 1e-81
Identities = 194/474 (40%), Positives = 251/474 (52%), Gaps = 56/474 (11%)
Query: 4 LMHLLVCVFGMGSWVTINGLWVELPLLVMELPEGWYLPSYLTVVIQLANIGPLLVTLLHH 63
L HLLV +FGMGSW +NG+WVELP++V +LPEGW LPSYL+VV+ L N+G L+VTL
Sbjct: 11 LTHLLVALFGMGSWAAVNGIWVELPVVVKDLPEGWSLPSYLSVVVALGNLGLLVVTLWRQ 70
Query: 64 FRPSCLSEVPI--IFTLLGVGTVTCIIFAFLWNMTSWVLDGHHSIAFLVLTFFLALVDCT 121
P +VPI + L VGT + A LW+ + V HS+AFL L LA+ CT
Sbjct: 71 LAPGKGEQVPIQVVQVLSVVGTA---LLAPLWHHVAPVAGQLHSVAFLTLALVLAMACCT 127
Query: 122 SSVTFLPFMSRLPTYYLTTFFVGEGLSGLLPALVALAQGSGLTTCVNVTEISDSVPSPVP 181
S+VTFLPF+S LP +L +FF+G+GLS LLP ++AL QG G C P P
Sbjct: 128 SNVTFLPFLSHLPPPFLRSFFLGQGLSALLPCVLALVQGVGRLEC-----------PPAP 176
Query: 182 TRETDIAQGVPRALVSALPGMEAPLSHLESRYLPAHFSPLVFFLLLSIMMACCLVAF--- 238
T T PL P F FF L+ ++ AF
Sbjct: 177 TNGTS----------------GPPLD------FPERFPASTFFWALTALLVTSAAAFRGL 214
Query: 239 -FVLQRQPRCWEASVEDLL--------NDQVTLHSIRPREENDLGPAGTVDSSQGQGYLE 289
+L P L ++ P +E AGT+ +
Sbjct: 215 LLLLPSLPSVTTGGSGPELQLGSPGAEEEEKEEEEALPLQEPPSQAAGTIPGP------D 268
Query: 290 EKAAPCCPAHLAFIYTLVAFVNALTNGMLPSVQTYSCLSYGPVAYHLAATLSIVANPLAS 349
+A AH AF+ L+AF +A+TNG+LPSVQ++SCL YG +AYHLA L ANPLA
Sbjct: 269 PEAHQLFSAHGAFLLGLMAFTSAVTNGVLPSVQSFSCLPYGRLAYHLAVVLGSAANPLAC 328
Query: 350 LVSMFLPNRSLLFLGVLSVLGTCFGGYNMAMAVMSPCPLLQGHWGGEVLIVASWVLFSGC 409
++M + RSL L LS+LG FG Y MA+A++SPCP L G G VL+V SWVL
Sbjct: 329 FLAMGVLCRSLAGLVGLSLLGMLFGAYLMALAILSPCPPLVGTTAGVVLVVLSWVLCLCV 388
Query: 410 LSYVKVMLGVVLRDLSRSALLWCGAAVQLGSLLGALLMFPLVNVLRLFSSADFC 463
SYVKV +L R ALL G A+Q+GSLLGA MFP ++ +F S C
Sbjct: 389 FSYVKVAASSLLHGGGRPALLAAGVAIQVGSLLGAGAMFPPTSIYHVFQSRKDC 442
>gi|38708299 solute carrier family 29 (nucleoside transporters),
member 2 [Homo sapiens]
Length = 456
Score = 35.8 bits (81), Expect = 0.086
Identities = 34/138 (24%), Positives = 58/138 (42%), Gaps = 20/138 (14%)
Query: 47 VIQLANIGPLLVTLLHHFRPSCLSEVPIIFTLLGVGTVTCIIFAFLWNMTSWVLDGHHSI 106
V L+ + LL TLL+ F C+ E T+ +G++ I+ F +D
Sbjct: 71 VTLLSQLPLLLFTLLNSFLYQCVPE-----TVRILGSLLAILLLFALTAALVKVDMSPGP 125
Query: 107 AFLVLTFFLALVDCTSSV---TFLPFMSRLPTYYLTTFFVGEGLSGLLPALVAL------ 157
F + + ++ S+V + + +P+ Y T F G+GL+G+ AL L
Sbjct: 126 FFSITMASVCFINSFSAVLQGSLFGQLGTMPSTYSTLFLSGQGLAGIFAALAMLLSMASG 185
Query: 158 ------AQGSGLTTCVNV 169
A G +T CV +
Sbjct: 186 VDAETSALGYFITPCVGI 203
>gi|189027121 solute carrier family 35, member F1 [Homo sapiens]
Length = 408
Score = 32.3 bits (72), Expect = 0.95
Identities = 23/87 (26%), Positives = 44/87 (50%), Gaps = 4/87 (4%)
Query: 362 FLGVLSVLGTCFGGYNMAMAVMSPCPLLQGHWGGEVLIVASWVLFSGCLSYVKVMLGVVL 421
FLG++ + G F G + +A+M LL+ W ++ ++ +V FS C+ + + VV+
Sbjct: 249 FLGMIGLFGAFFSG--IQLAIMEHKELLKVPWDWQIGLL--YVGFSACMFGLYSFMPVVI 304
Query: 422 RDLSRSALLWCGAAVQLGSLLGALLMF 448
+ S +++ L SL L +F
Sbjct: 305 KKTSATSVNLSLLTADLYSLFCGLFLF 331
>gi|116268113 transmembrane protein 99 [Homo sapiens]
Length = 258
Score = 32.0 bits (71), Expect = 1.2
Identities = 16/46 (34%), Positives = 25/46 (54%), Gaps = 4/46 (8%)
Query: 7 LLVCVFGMGSWVTIN----GLWVELPLLVMELPEGWYLPSYLTVVI 48
LL C+ G+GSW+ N G W L L + L +G ++ ++L I
Sbjct: 96 LLPCLLGVGSWLLFNNWTGGSWFSLHLQQVSLSQGSHVAAFLPEAI 141
>gi|50843827 activating molecule in beclin-1-regulated autophagy
[Homo sapiens]
Length = 1208
Score = 31.2 bits (69), Expect = 2.1
Identities = 51/211 (24%), Positives = 83/211 (39%), Gaps = 27/211 (12%)
Query: 17 WVTINGLWVELP------LLVMELPEGWYLPSYLT---VVIQLANIGPLLVTLLHHFR-P 66
W+ G VELP L+ P+ L S + I G + +L+ H R P
Sbjct: 39 WMKWEGKRVELPDSPRSTFLLAFSPDRTLLASTHVNHNIYITEVKTGKCVHSLIGHRRTP 98
Query: 67 SCLSEVPIIFTLLGVGTVTCIIFAFLWNM----TSWVLDGHHSIAFLVL--TFFLALVDC 120
C++ P I L+ G + + +W++ SW D +++IA L T L L+
Sbjct: 99 WCVTFHPTISGLIASGCLDGEVR--IWDLHGGSESWFTDSNNAIASLAFHPTAQLLLIAT 156
Query: 121 TSSVTFLPFMSRLPTYYLTTFFVGEGLSGLLPALVALAQGSG---LTTCVNVTEISDSVP 177
+ + F + R P F V + S + + G LT VN +
Sbjct: 157 ANEIHFWDWSRREP------FAVVKTASEMERVRLVRFDPLGHYLLTAIVNPSNQQGDDE 210
Query: 178 SPVPTRETDIAQGVPRALVSALPGMEAPLSH 208
+P T+++ RAL+ + P PL H
Sbjct: 211 PEIPIDGTELSHYRQRALLQSQPVRRTPLLH 241
>gi|89353783 coagulation factor II (thrombin) receptor-like 3
precursor [Homo sapiens]
Length = 385
Score = 30.4 bits (67), Expect = 3.6
Identities = 27/88 (30%), Positives = 41/88 (46%), Gaps = 15/88 (17%)
Query: 312 ALTNGMLPSVQTYSCLSYGPVAYHLAAT-------LSIVANPLASLVSMFLPNRSLLFLG 364
AL LP + C YG + LAA+ L + A LAS V+ F+P+ LL L
Sbjct: 249 ALLGCFLPLLAMLLC--YGATLHTLAASGRRYGHALRLTAVVLASAVAFFVPSNLLLLLH 306
Query: 365 VL----SVLGTCFGGY--NMAMAVMSPC 386
S G +G Y ++A++ ++ C
Sbjct: 307 YSDPSPSAWGNLYGAYVPSLALSTLNSC 334
>gi|223634014 solute carrier organic anion transporter family,
member 2B1 isoform 3 [Homo sapiens]
Length = 565
Score = 30.0 bits (66), Expect = 4.7
Identities = 21/57 (36%), Positives = 29/57 (50%), Gaps = 5/57 (8%)
Query: 399 IVASWV-LFSGCLSYVKVMLGVVLRDLSRSAL----LWCGAAVQLGSLLGALLMFPL 450
I AS+ L GCLS+ V++G+V+ + L + CGA LG LL PL
Sbjct: 260 ITASYANLLIGCLSFPSVIVGIVVGGVLVKRLHLGPVGCGALCLLGMLLCLFFSLPL 316
>gi|223634012 solute carrier organic anion transporter family,
member 2B1 isoform 2 [Homo sapiens]
Length = 687
Score = 30.0 bits (66), Expect = 4.7
Identities = 21/57 (36%), Positives = 29/57 (50%), Gaps = 5/57 (8%)
Query: 399 IVASWV-LFSGCLSYVKVMLGVVLRDLSRSAL----LWCGAAVQLGSLLGALLMFPL 450
I AS+ L GCLS+ V++G+V+ + L + CGA LG LL PL
Sbjct: 382 ITASYANLLIGCLSFPSVIVGIVVGGVLVKRLHLGPVGCGALCLLGMLLCLFFSLPL 438
>gi|6005820 solute carrier organic anion transporter family, member
2B1 isoform 1 [Homo sapiens]
Length = 709
Score = 30.0 bits (66), Expect = 4.7
Identities = 21/57 (36%), Positives = 29/57 (50%), Gaps = 5/57 (8%)
Query: 399 IVASWV-LFSGCLSYVKVMLGVVLRDLSRSAL----LWCGAAVQLGSLLGALLMFPL 450
I AS+ L GCLS+ V++G+V+ + L + CGA LG LL PL
Sbjct: 404 ITASYANLLIGCLSFPSVIVGIVVGGVLVKRLHLGPVGCGALCLLGMLLCLFFSLPL 460
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.328 0.141 0.449
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 17,727,624
Number of Sequences: 37866
Number of extensions: 799794
Number of successful extensions: 2559
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 8
Number of HSP's that attempted gapping in prelim test: 2544
Number of HSP's gapped (non-prelim): 16
length of query: 469
length of database: 18,247,518
effective HSP length: 106
effective length of query: 363
effective length of database: 14,233,722
effective search space: 5166841086
effective search space used: 5166841086
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.7 bits)
S2: 64 (29.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.