Search of human proteins with 153267427

Search of human proteins with 153267427

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|153267427 enolase 3 [Homo sapiens]
         (434 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|153267448 enolase 3 [Homo sapiens]                                 863   0.0  
gi|153267427 enolase 3 [Homo sapiens]                                 863   0.0  
gi|5803011 enolase 2 [Homo sapiens]                                   735   0.0  
gi|4503571 enolase 1 [Homo sapiens]                                   733   0.0  
gi|169201757 PREDICTED: chromosome 10 open reading frame 134 [Ho...    88   2e-17
gi|169201331 PREDICTED: chromosome 10 open reading frame 134 [Ho...    88   2e-17
gi|239744207 PREDICTED: chromosome 10 open reading frame 134 [Ho...    88   2e-17
gi|27437051 colony stimulating factor 3 isoform c [Homo sapiens]       30   3.3  
gi|27437049 colony stimulating factor 3 isoform b precursor [Hom...    30   3.3  
gi|4503079 colony stimulating factor 3 isoform a precursor [Homo...    30   3.3  
gi|47777317 cartilage acidic protein 1 [Homo sapiens]                  30   3.3  
gi|9256616 protocadherin beta 4 precursor [Homo sapiens]               30   4.3  
gi|5032033 RNA binding motif protein 6 [Homo sapiens]                  30   5.6  

>gi|153267448 enolase 3 [Homo sapiens]
          Length = 434

 Score =  863 bits (2229), Expect = 0.0
 Identities = 434/434 (100%), Positives = 434/434 (100%)

Query: 1   MAMQKIFAREILDSRGNPTVEVDLHTAKGRFRAAVPSGASTGIYEALELRDGDKGRYLGK 60
           MAMQKIFAREILDSRGNPTVEVDLHTAKGRFRAAVPSGASTGIYEALELRDGDKGRYLGK
Sbjct: 1   MAMQKIFAREILDSRGNPTVEVDLHTAKGRFRAAVPSGASTGIYEALELRDGDKGRYLGK 60

Query: 61  GVLKAVENINSTLGPALLQKKLSVADQEKVDKFMIELDGTENKSKFGANAILGVSLAVCK 120
           GVLKAVENINSTLGPALLQKKLSVADQEKVDKFMIELDGTENKSKFGANAILGVSLAVCK
Sbjct: 61  GVLKAVENINSTLGPALLQKKLSVADQEKVDKFMIELDGTENKSKFGANAILGVSLAVCK 120

Query: 121 AGAAEKGVPLYRHIADLAGNPDLILPVPAFNVINGGSHAGNKLAMQEFMILPVGASSFKE 180
           AGAAEKGVPLYRHIADLAGNPDLILPVPAFNVINGGSHAGNKLAMQEFMILPVGASSFKE
Sbjct: 121 AGAAEKGVPLYRHIADLAGNPDLILPVPAFNVINGGSHAGNKLAMQEFMILPVGASSFKE 180

Query: 181 AMRIGAEVYHHLKGVIKAKYGKDATNVGDEGGFAPNILENNEALELLKTAIQAAGYPDKV 240
           AMRIGAEVYHHLKGVIKAKYGKDATNVGDEGGFAPNILENNEALELLKTAIQAAGYPDKV
Sbjct: 181 AMRIGAEVYHHLKGVIKAKYGKDATNVGDEGGFAPNILENNEALELLKTAIQAAGYPDKV 240

Query: 241 VIGMDVAASEFYRNGKYDLDFKSPDDPARHITGEKLGELYKSFIKNYPVVSIEDPFDQDD 300
           VIGMDVAASEFYRNGKYDLDFKSPDDPARHITGEKLGELYKSFIKNYPVVSIEDPFDQDD
Sbjct: 241 VIGMDVAASEFYRNGKYDLDFKSPDDPARHITGEKLGELYKSFIKNYPVVSIEDPFDQDD 300

Query: 301 WATWTSFLSGVNIQIVGDDLTVTNPKRIAQAVEKKACNCLLLKVNQIGSVTESIQACKLA 360
           WATWTSFLSGVNIQIVGDDLTVTNPKRIAQAVEKKACNCLLLKVNQIGSVTESIQACKLA
Sbjct: 301 WATWTSFLSGVNIQIVGDDLTVTNPKRIAQAVEKKACNCLLLKVNQIGSVTESIQACKLA 360

Query: 361 QSNGWGVMVSHRSGETEDTFIADLVVGLCTGQIKTGAPCRSERLAKYNQLMRIEEALGDK 420
           QSNGWGVMVSHRSGETEDTFIADLVVGLCTGQIKTGAPCRSERLAKYNQLMRIEEALGDK
Sbjct: 361 QSNGWGVMVSHRSGETEDTFIADLVVGLCTGQIKTGAPCRSERLAKYNQLMRIEEALGDK 420

Query: 421 AIFAGRKFRNPKAK 434
           AIFAGRKFRNPKAK
Sbjct: 421 AIFAGRKFRNPKAK 434


>gi|153267427 enolase 3 [Homo sapiens]
          Length = 434

 Score =  863 bits (2229), Expect = 0.0
 Identities = 434/434 (100%), Positives = 434/434 (100%)

Query: 1   MAMQKIFAREILDSRGNPTVEVDLHTAKGRFRAAVPSGASTGIYEALELRDGDKGRYLGK 60
           MAMQKIFAREILDSRGNPTVEVDLHTAKGRFRAAVPSGASTGIYEALELRDGDKGRYLGK
Sbjct: 1   MAMQKIFAREILDSRGNPTVEVDLHTAKGRFRAAVPSGASTGIYEALELRDGDKGRYLGK 60

Query: 61  GVLKAVENINSTLGPALLQKKLSVADQEKVDKFMIELDGTENKSKFGANAILGVSLAVCK 120
           GVLKAVENINSTLGPALLQKKLSVADQEKVDKFMIELDGTENKSKFGANAILGVSLAVCK
Sbjct: 61  GVLKAVENINSTLGPALLQKKLSVADQEKVDKFMIELDGTENKSKFGANAILGVSLAVCK 120

Query: 121 AGAAEKGVPLYRHIADLAGNPDLILPVPAFNVINGGSHAGNKLAMQEFMILPVGASSFKE 180
           AGAAEKGVPLYRHIADLAGNPDLILPVPAFNVINGGSHAGNKLAMQEFMILPVGASSFKE
Sbjct: 121 AGAAEKGVPLYRHIADLAGNPDLILPVPAFNVINGGSHAGNKLAMQEFMILPVGASSFKE 180

Query: 181 AMRIGAEVYHHLKGVIKAKYGKDATNVGDEGGFAPNILENNEALELLKTAIQAAGYPDKV 240
           AMRIGAEVYHHLKGVIKAKYGKDATNVGDEGGFAPNILENNEALELLKTAIQAAGYPDKV
Sbjct: 181 AMRIGAEVYHHLKGVIKAKYGKDATNVGDEGGFAPNILENNEALELLKTAIQAAGYPDKV 240

Query: 241 VIGMDVAASEFYRNGKYDLDFKSPDDPARHITGEKLGELYKSFIKNYPVVSIEDPFDQDD 300
           VIGMDVAASEFYRNGKYDLDFKSPDDPARHITGEKLGELYKSFIKNYPVVSIEDPFDQDD
Sbjct: 241 VIGMDVAASEFYRNGKYDLDFKSPDDPARHITGEKLGELYKSFIKNYPVVSIEDPFDQDD 300

Query: 301 WATWTSFLSGVNIQIVGDDLTVTNPKRIAQAVEKKACNCLLLKVNQIGSVTESIQACKLA 360
           WATWTSFLSGVNIQIVGDDLTVTNPKRIAQAVEKKACNCLLLKVNQIGSVTESIQACKLA
Sbjct: 301 WATWTSFLSGVNIQIVGDDLTVTNPKRIAQAVEKKACNCLLLKVNQIGSVTESIQACKLA 360

Query: 361 QSNGWGVMVSHRSGETEDTFIADLVVGLCTGQIKTGAPCRSERLAKYNQLMRIEEALGDK 420
           QSNGWGVMVSHRSGETEDTFIADLVVGLCTGQIKTGAPCRSERLAKYNQLMRIEEALGDK
Sbjct: 361 QSNGWGVMVSHRSGETEDTFIADLVVGLCTGQIKTGAPCRSERLAKYNQLMRIEEALGDK 420

Query: 421 AIFAGRKFRNPKAK 434
           AIFAGRKFRNPKAK
Sbjct: 421 AIFAGRKFRNPKAK 434


>gi|5803011 enolase 2 [Homo sapiens]
          Length = 434

 Score =  735 bits (1897), Expect = 0.0
 Identities = 362/431 (83%), Positives = 398/431 (92%)

Query: 1   MAMQKIFAREILDSRGNPTVEVDLHTAKGRFRAAVPSGASTGIYEALELRDGDKGRYLGK 60
           M+++KI+AREILDSRGNPTVEVDL+TAKG FRAAVPSGASTGIYEALELRDGDK RYLGK
Sbjct: 1   MSIEKIWAREILDSRGNPTVEVDLYTAKGLFRAAVPSGASTGIYEALELRDGDKQRYLGK 60

Query: 61  GVLKAVENINSTLGPALLQKKLSVADQEKVDKFMIELDGTENKSKFGANAILGVSLAVCK 120
           GVLKAV++INST+ PAL+   LSV +QEK+D  M+ELDGTENKSKFGANAILGVSLAVCK
Sbjct: 61  GVLKAVDHINSTIAPALISSGLSVVEQEKLDNLMLELDGTENKSKFGANAILGVSLAVCK 120

Query: 121 AGAAEKGVPLYRHIADLAGNPDLILPVPAFNVINGGSHAGNKLAMQEFMILPVGASSFKE 180
           AGAAE+ +PLYRHIA LAGN DLILPVPAFNVINGGSHAGNKLAMQEFMILPVGA SF++
Sbjct: 121 AGAAERELPLYRHIAQLAGNSDLILPVPAFNVINGGSHAGNKLAMQEFMILPVGAESFRD 180

Query: 181 AMRIGAEVYHHLKGVIKAKYGKDATNVGDEGGFAPNILENNEALELLKTAIQAAGYPDKV 240
           AMR+GAEVYH LKGVIK KYGKDATNVGDEGGFAPNILEN+EALEL+K AI  AGY +K+
Sbjct: 181 AMRLGAEVYHTLKGVIKDKYGKDATNVGDEGGFAPNILENSEALELVKEAIDKAGYTEKI 240

Query: 241 VIGMDVAASEFYRNGKYDLDFKSPDDPARHITGEKLGELYKSFIKNYPVVSIEDPFDQDD 300
           VIGMDVAASEFYR+GKYDLDFKSP DP+R+ITG++LG LY+ F+++YPVVSIEDPFDQDD
Sbjct: 241 VIGMDVAASEFYRDGKYDLDFKSPTDPSRYITGDQLGALYQDFVRDYPVVSIEDPFDQDD 300

Query: 301 WATWTSFLSGVNIQIVGDDLTVTNPKRIAQAVEKKACNCLLLKVNQIGSVTESIQACKLA 360
           WA W+ F + V IQIVGDDLTVTNPKRI +AVE+KACNCLLLKVNQIGSVTE+IQACKLA
Sbjct: 301 WAAWSKFTANVGIQIVGDDLTVTNPKRIERAVEEKACNCLLLKVNQIGSVTEAIQACKLA 360

Query: 361 QSNGWGVMVSHRSGETEDTFIADLVVGLCTGQIKTGAPCRSERLAKYNQLMRIEEALGDK 420
           Q NGWGVMVSHRSGETEDTFIADLVVGLCTGQIKTGAPCRSERLAKYNQLMRIEE LGD+
Sbjct: 361 QENGWGVMVSHRSGETEDTFIADLVVGLCTGQIKTGAPCRSERLAKYNQLMRIEEELGDE 420

Query: 421 AIFAGRKFRNP 431
           A FAG  FRNP
Sbjct: 421 ARFAGHNFRNP 431


>gi|4503571 enolase 1 [Homo sapiens]
          Length = 434

 Score =  733 bits (1893), Expect = 0.0
 Identities = 362/434 (83%), Positives = 396/434 (91%)

Query: 1   MAMQKIFAREILDSRGNPTVEVDLHTAKGRFRAAVPSGASTGIYEALELRDGDKGRYLGK 60
           M++ KI AREI DSRGNPTVEVDL T+KG FRAAVPSGASTGIYEALELRD DK RY+GK
Sbjct: 1   MSILKIHAREIFDSRGNPTVEVDLFTSKGLFRAAVPSGASTGIYEALELRDNDKTRYMGK 60

Query: 61  GVLKAVENINSTLGPALLQKKLSVADQEKVDKFMIELDGTENKSKFGANAILGVSLAVCK 120
           GV KAVE+IN T+ PAL+ KKL+V +QEK+DK MIE+DGTENKSKFGANAILGVSLAVCK
Sbjct: 61  GVSKAVEHINKTIAPALVSKKLNVTEQEKIDKLMIEMDGTENKSKFGANAILGVSLAVCK 120

Query: 121 AGAAEKGVPLYRHIADLAGNPDLILPVPAFNVINGGSHAGNKLAMQEFMILPVGASSFKE 180
           AGA EKGVPLYRHIADLAGN ++ILPVPAFNVINGGSHAGNKLAMQEFMILPVGA++F+E
Sbjct: 121 AGAVEKGVPLYRHIADLAGNSEVILPVPAFNVINGGSHAGNKLAMQEFMILPVGAANFRE 180

Query: 181 AMRIGAEVYHHLKGVIKAKYGKDATNVGDEGGFAPNILENNEALELLKTAIQAAGYPDKV 240
           AMRIGAEVYH+LK VIK KYGKDATNVGDEGGFAPNILEN E LELLKTAI  AGY DKV
Sbjct: 181 AMRIGAEVYHNLKNVIKEKYGKDATNVGDEGGFAPNILENKEGLELLKTAIGKAGYTDKV 240

Query: 241 VIGMDVAASEFYRNGKYDLDFKSPDDPARHITGEKLGELYKSFIKNYPVVSIEDPFDQDD 300
           VIGMDVAASEF+R+GKYDLDFKSPDDP+R+I+ ++L +LYKSFIK+YPVVSIEDPFDQDD
Sbjct: 241 VIGMDVAASEFFRSGKYDLDFKSPDDPSRYISPDQLADLYKSFIKDYPVVSIEDPFDQDD 300

Query: 301 WATWTSFLSGVNIQIVGDDLTVTNPKRIAQAVEKKACNCLLLKVNQIGSVTESIQACKLA 360
           W  W  F +   IQ+VGDDLTVTNPKRIA+AV +K+CNCLLLKVNQIGSVTES+QACKLA
Sbjct: 301 WGAWQKFTASAGIQVVGDDLTVTNPKRIAKAVNEKSCNCLLLKVNQIGSVTESLQACKLA 360

Query: 361 QSNGWGVMVSHRSGETEDTFIADLVVGLCTGQIKTGAPCRSERLAKYNQLMRIEEALGDK 420
           Q+NGWGVMVSHRSGETEDTFIADLVVGLCTGQIKTGAPCRSERLAKYNQL+RIEE LG K
Sbjct: 361 QANGWGVMVSHRSGETEDTFIADLVVGLCTGQIKTGAPCRSERLAKYNQLLRIEEELGSK 420

Query: 421 AIFAGRKFRNPKAK 434
           A FAGR FRNP AK
Sbjct: 421 AKFAGRNFRNPLAK 434


>gi|169201757 PREDICTED: chromosome 10 open reading frame 134 [Homo
           sapiens]
          Length = 626

 Score = 87.8 bits (216), Expect = 2e-17
 Identities = 88/341 (25%), Positives = 149/341 (43%), Gaps = 36/341 (10%)

Query: 107 GANAILGVSLAVCKAGAAEKGVPLYRHIADLAGNPD----LILPVPAFNVINGGSHAGNK 162
           G+ AI  VSLAV KA A     PLY +IA L  N +    L +P+   ++++ G  +  K
Sbjct: 235 GSMAIGAVSLAVAKACAMLLNKPLYLNIALLKHNQEQPTTLSMPLLMVSLVSCGKSSSGK 294

Query: 163 L-AMQEFMILPVGASSFKEAMRIGAEVYHHLKGVIK--------AKYGKDATNVGDE--- 210
           L  M+E + +P    + K+ + +  E+  H+  +I+         K G D +  G +   
Sbjct: 295 LNLMKEVICIPHPELTTKQGVEMLMEMQKHINKIIEMPSPPKAETKKGHDGSKRGQQQIT 354

Query: 211 ------GGFAPNILENNEALELLKTAIQAAGYP--DKVVIGMDVAASEF--YRNGKYDLD 260
                 G    N     + L L++      G      + + ++ A  E   Y  GKY++ 
Sbjct: 355 GKMSHLGCLTINCDSIEQPLLLIQEICANLGLELGTNLHLAINCAGHELMDYNKGKYEVI 414

Query: 261 FKSPDDPARHITGEKLGELYKSFIKNYP-VVSIEDPFDQDDWATWTSFLS--GVNIQIVG 317
             +  + A  +      +LY   I  YP ++++ DPF ++D   W S     G    I+ 
Sbjct: 415 MGTYKNAAEMV------DLYVDLINKYPSIIALIDPFRKEDSEQWDSIYHALGSRCYIIA 468

Query: 318 DDLTVTNPKRIAQA-VEKKACNCLLLKVNQIGSVTESIQACKLAQSNGWGVMVSHRSGET 376
              + +  K + Q  +     N L++K     ++++ ++   L  S     +     GE+
Sbjct: 469 GTASKSISKLLEQGNISIPKSNGLIIKHTNQTTMSDLVEITNLIDSKKHITVFGSTEGES 528

Query: 377 EDTFIADLVVGLCTGQIKTGAPCRSERLAKYNQLMRIEEAL 417
            D  + DL VGL    IK G   R ER+ KYN+L+ IEE L
Sbjct: 529 SDDSLVDLAVGLGVRFIKLGGLSRGERVTKYNRLLTIEEEL 569



 Score = 29.3 bits (64), Expect = 7.3
 Identities = 26/95 (27%), Positives = 45/95 (47%), Gaps = 8/95 (8%)

Query: 5   KIFAREILDSRGNPTVEVDLHTAKGRFRAAVPSGASTGIYEA-----LELRDGDKGRYLG 59
           KI  +++LD  G PT++VD+      F   V S   +  +E       EL   ++     
Sbjct: 71  KIVGKDVLDGLGLPTLQVDIFCTIQNFPKNVCSVVISTHFEVHENALPELAKAEEAE-RA 129

Query: 60  KGVLKAVENINSTLGPALLQKKLSVADQEKVDKFM 94
             V  AV+ +NST+   L  + ++ +DQ +VD  +
Sbjct: 130 SAVSTAVQWVNSTITHEL--QGMAPSDQAEVDHLL 162


>gi|169201331 PREDICTED: chromosome 10 open reading frame 134 [Homo
           sapiens]
          Length = 626

 Score = 87.8 bits (216), Expect = 2e-17
 Identities = 88/341 (25%), Positives = 149/341 (43%), Gaps = 36/341 (10%)

Query: 107 GANAILGVSLAVCKAGAAEKGVPLYRHIADLAGNPD----LILPVPAFNVINGGSHAGNK 162
           G+ AI  VSLAV KA A     PLY +IA L  N +    L +P+   ++++ G  +  K
Sbjct: 235 GSMAIGAVSLAVAKACAMLLNKPLYLNIALLKHNQEQPTTLSMPLLMVSLVSCGKSSSGK 294

Query: 163 L-AMQEFMILPVGASSFKEAMRIGAEVYHHLKGVIK--------AKYGKDATNVGDE--- 210
           L  M+E + +P    + K+ + +  E+  H+  +I+         K G D +  G +   
Sbjct: 295 LNLMKEVICIPHPELTTKQGVEMLMEMQKHINKIIEMPSPPKAETKKGHDGSKRGQQQIT 354

Query: 211 ------GGFAPNILENNEALELLKTAIQAAGYP--DKVVIGMDVAASEF--YRNGKYDLD 260
                 G    N     + L L++      G      + + ++ A  E   Y  GKY++ 
Sbjct: 355 GKMSHLGCLTINCDSIEQPLLLIQEICANLGLELGTNLHLAINCAGHELMDYNKGKYEVI 414

Query: 261 FKSPDDPARHITGEKLGELYKSFIKNYP-VVSIEDPFDQDDWATWTSFLS--GVNIQIVG 317
             +  + A  +      +LY   I  YP ++++ DPF ++D   W S     G    I+ 
Sbjct: 415 MGTYKNAAEMV------DLYVDLINKYPSIIALIDPFRKEDSEQWDSIYHALGSRCYIIA 468

Query: 318 DDLTVTNPKRIAQA-VEKKACNCLLLKVNQIGSVTESIQACKLAQSNGWGVMVSHRSGET 376
              + +  K + Q  +     N L++K     ++++ ++   L  S     +     GE+
Sbjct: 469 GTASKSISKLLEQGNISIPKSNGLIIKHTNQTTMSDLVEITNLIDSKKHITVFGSTEGES 528

Query: 377 EDTFIADLVVGLCTGQIKTGAPCRSERLAKYNQLMRIEEAL 417
            D  + DL VGL    IK G   R ER+ KYN+L+ IEE L
Sbjct: 529 SDDSLVDLAVGLGVRFIKLGGLSRGERVTKYNRLLTIEEEL 569



 Score = 29.3 bits (64), Expect = 7.3
 Identities = 26/95 (27%), Positives = 45/95 (47%), Gaps = 8/95 (8%)

Query: 5   KIFAREILDSRGNPTVEVDLHTAKGRFRAAVPSGASTGIYEA-----LELRDGDKGRYLG 59
           KI  +++LD  G PT++VD+      F   V S   +  +E       EL   ++     
Sbjct: 71  KIVGKDVLDGLGLPTLQVDIFCTIQNFPKNVCSVVISTHFEVHENALPELAKAEEAE-RA 129

Query: 60  KGVLKAVENINSTLGPALLQKKLSVADQEKVDKFM 94
             V  AV+ +NST+   L  + ++ +DQ +VD  +
Sbjct: 130 SAVSTAVQWVNSTITHEL--QGMAPSDQAEVDHLL 162


>gi|239744207 PREDICTED: chromosome 10 open reading frame 134 [Homo
           sapiens]
          Length = 626

 Score = 87.8 bits (216), Expect = 2e-17
 Identities = 88/341 (25%), Positives = 149/341 (43%), Gaps = 36/341 (10%)

Query: 107 GANAILGVSLAVCKAGAAEKGVPLYRHIADLAGNPD----LILPVPAFNVINGGSHAGNK 162
           G+ AI  VSLAV KA A     PLY +IA L  N +    L +P+   ++++ G  +  K
Sbjct: 235 GSMAIGAVSLAVAKACAMLLNKPLYLNIALLKHNQEQPTTLSMPLLMVSLVSCGKSSSGK 294

Query: 163 L-AMQEFMILPVGASSFKEAMRIGAEVYHHLKGVIK--------AKYGKDATNVGDE--- 210
           L  M+E + +P    + K+ + +  E+  H+  +I+         K G D +  G +   
Sbjct: 295 LNLMKEVICIPHPELTTKQGVEMLMEMQKHINKIIEMPSPPKAETKKGHDGSKRGQQQIT 354

Query: 211 ------GGFAPNILENNEALELLKTAIQAAGYP--DKVVIGMDVAASEF--YRNGKYDLD 260
                 G    N     + L L++      G      + + ++ A  E   Y  GKY++ 
Sbjct: 355 GKMSHLGCLTINCDSIEQPLLLIQEICANLGLELGTNLHLAINCAGHELMDYNKGKYEVI 414

Query: 261 FKSPDDPARHITGEKLGELYKSFIKNYP-VVSIEDPFDQDDWATWTSFLS--GVNIQIVG 317
             +  + A  +      +LY   I  YP ++++ DPF ++D   W S     G    I+ 
Sbjct: 415 MGTYKNAAEMV------DLYVDLINKYPSIIALIDPFRKEDSEQWDSIYHALGSRCYIIA 468

Query: 318 DDLTVTNPKRIAQA-VEKKACNCLLLKVNQIGSVTESIQACKLAQSNGWGVMVSHRSGET 376
              + +  K + Q  +     N L++K     ++++ ++   L  S     +     GE+
Sbjct: 469 GTASKSISKLLEQGNISIPKSNGLIIKHTNQTTMSDLVEITNLIDSKKHITVFGSTEGES 528

Query: 377 EDTFIADLVVGLCTGQIKTGAPCRSERLAKYNQLMRIEEAL 417
            D  + DL VGL    IK G   R ER+ KYN+L+ IEE L
Sbjct: 529 SDDSLVDLAVGLGVRFIKLGGLSRGERVTKYNRLLTIEEEL 569



 Score = 29.3 bits (64), Expect = 7.3
 Identities = 26/95 (27%), Positives = 45/95 (47%), Gaps = 8/95 (8%)

Query: 5   KIFAREILDSRGNPTVEVDLHTAKGRFRAAVPSGASTGIYEA-----LELRDGDKGRYLG 59
           KI  +++LD  G PT++VD+      F   V S   +  +E       EL   ++     
Sbjct: 71  KIVGKDVLDGLGLPTLQVDIFCTIQNFPKNVCSVVISTHFEVHENALPELAKAEEAE-RA 129

Query: 60  KGVLKAVENINSTLGPALLQKKLSVADQEKVDKFM 94
             V  AV+ +NST+   L  + ++ +DQ +VD  +
Sbjct: 130 SAVSTAVQWVNSTITHEL--QGMAPSDQAEVDHLL 162


>gi|27437051 colony stimulating factor 3 isoform c [Homo sapiens]
          Length = 200

 Score = 30.4 bits (67), Expect = 3.3
 Identities = 15/32 (46%), Positives = 22/32 (68%)

Query: 55  GRYLGKGVLKAVENINSTLGPALLQKKLSVAD 86
           G +L +G+L+A+E I+  LGP L   +L VAD
Sbjct: 107 GLFLYQGLLQALEGISPELGPTLDTLQLDVAD 138


>gi|27437049 colony stimulating factor 3 isoform b precursor [Homo
           sapiens]
          Length = 204

 Score = 30.4 bits (67), Expect = 3.3
 Identities = 15/32 (46%), Positives = 22/32 (68%)

Query: 55  GRYLGKGVLKAVENINSTLGPALLQKKLSVAD 86
           G +L +G+L+A+E I+  LGP L   +L VAD
Sbjct: 111 GLFLYQGLLQALEGISPELGPTLDTLQLDVAD 142


>gi|4503079 colony stimulating factor 3 isoform a precursor [Homo
           sapiens]
          Length = 207

 Score = 30.4 bits (67), Expect = 3.3
 Identities = 15/32 (46%), Positives = 22/32 (68%)

Query: 55  GRYLGKGVLKAVENINSTLGPALLQKKLSVAD 86
           G +L +G+L+A+E I+  LGP L   +L VAD
Sbjct: 114 GLFLYQGLLQALEGISPELGPTLDTLQLDVAD 145


>gi|47777317 cartilage acidic protein 1 [Homo sapiens]
          Length = 661

 Score = 30.4 bits (67), Expect = 3.3
 Identities = 24/90 (26%), Positives = 39/90 (43%), Gaps = 1/90 (1%)

Query: 181 AMRIGAEVYHHLKGV-IKAKYGKDATNVGDEGGFAPNILENNEALELLKTAIQAAGYPDK 239
           A   G   Y   +GV +       A+++  +    PN L +N        A  +AG  D 
Sbjct: 229 AAEAGVSKYTGGRGVSVGPILSSSASDIFCDNENGPNFLFHNRGDGTFVDAAASAGVDDP 288

Query: 240 VVIGMDVAASEFYRNGKYDLDFKSPDDPAR 269
              G  VA ++F R+GK D+ + + + P R
Sbjct: 289 HQHGRGVALADFNRDGKVDIVYGNWNGPHR 318


>gi|9256616 protocadherin beta 4 precursor [Homo sapiens]
          Length = 795

 Score = 30.0 bits (66), Expect = 4.3
 Identities = 16/58 (27%), Positives = 28/58 (48%), Gaps = 3/58 (5%)

Query: 55  GRYLGKGVLKAVENINSTLGPALLQKKLSVADQEKVDKFMIELDGTENKSKFGANAIL 112
           G +     +K   +IN   G  LL+KKL   D EK+  + +E++ T+     G   ++
Sbjct: 279 GLFQASDEIKQTFSINEVTGEILLKKKL---DFEKIKSYHVEIEATDGGGLSGKGTVV 333


>gi|5032033 RNA binding motif protein 6 [Homo sapiens]
          Length = 1123

 Score = 29.6 bits (65), Expect = 5.6
 Identities = 14/37 (37%), Positives = 17/37 (45%)

Query: 243 GMDVAASEFYRNGKYDLDFKSPDDPARHITGEKLGEL 279
           G D   S+F   G YDLDF+  D       G  L +L
Sbjct: 167 GRDAPPSDFRGRGTYDLDFRGRDGSHADFRGRDLSDL 203


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.317    0.135    0.389 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 15,485,928
Number of Sequences: 37866
Number of extensions: 673133
Number of successful extensions: 1344
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 1323
Number of HSP's gapped (non-prelim): 16
length of query: 434
length of database: 18,247,518
effective HSP length: 105
effective length of query: 329
effective length of database: 14,271,588
effective search space: 4695352452
effective search space used: 4695352452
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 63 (28.9 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.