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Search of human proteins with 15011918
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|15011918 ATPase, H+ transporting, lysosomal accessory
protein 2 [Homo sapiens]
(350 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|15011918 ATPase, H+ transporting, lysosomal accessory protein... 683 0.0
gi|115496169 myosin, heavy chain 7, cardiac muscle, beta [Homo s... 35 0.10
gi|156104908 myosin heavy chain 6 [Homo sapiens] 34 0.22
gi|122937261 coiled-coil domain containing 85A [Homo sapiens] 32 1.1
gi|110611903 myosin, heavy polypeptide 4, skeletal muscle [Homo ... 31 1.4
gi|4759248 tryptophan hydroxylase 1 [Homo sapiens] 30 2.5
gi|98986453 myosin, heavy chain 3, skeletal muscle, embryonic [H... 30 3.2
gi|115527082 myosin, heavy chain 1, skeletal muscle, adult [Homo... 30 3.2
gi|153791586 myosin, heavy chain 2, skeletal muscle, adult [Homo... 30 3.2
gi|153792663 myosin, heavy chain 2, skeletal muscle, adult [Homo... 30 3.2
gi|153945790 myosin, heavy chain 8, skeletal muscle, perinatal [... 30 4.2
>gi|15011918 ATPase, H+ transporting, lysosomal accessory protein 2
[Homo sapiens]
Length = 350
Score = 683 bits (1763), Expect = 0.0
Identities = 350/350 (100%), Positives = 350/350 (100%)
Query: 1 MAVFVVLLALVAGVLGNEFSILKSPGSVVFRNGNWPIPGERIPDVAALSMGFSVKEDLSW 60
MAVFVVLLALVAGVLGNEFSILKSPGSVVFRNGNWPIPGERIPDVAALSMGFSVKEDLSW
Sbjct: 1 MAVFVVLLALVAGVLGNEFSILKSPGSVVFRNGNWPIPGERIPDVAALSMGFSVKEDLSW 60
Query: 61 PGLAVGNLFHRPRATVMVMVKGVNKLALPPGSVISYPLENAVPFSLDSVANSIHSLFSEE 120
PGLAVGNLFHRPRATVMVMVKGVNKLALPPGSVISYPLENAVPFSLDSVANSIHSLFSEE
Sbjct: 61 PGLAVGNLFHRPRATVMVMVKGVNKLALPPGSVISYPLENAVPFSLDSVANSIHSLFSEE 120
Query: 121 TPVVLQLAPSEERVYMVGKANSVFEDLSVTLRQLRNRLFQENSVLSSLPLNSLSRNNEVD 180
TPVVLQLAPSEERVYMVGKANSVFEDLSVTLRQLRNRLFQENSVLSSLPLNSLSRNNEVD
Sbjct: 121 TPVVLQLAPSEERVYMVGKANSVFEDLSVTLRQLRNRLFQENSVLSSLPLNSLSRNNEVD 180
Query: 181 LLFLSELQVLHDISSLLSRHKHLAKDHSPDLYSLELAGLDEIGKRYGEDSEQFRDASKIL 240
LLFLSELQVLHDISSLLSRHKHLAKDHSPDLYSLELAGLDEIGKRYGEDSEQFRDASKIL
Sbjct: 181 LLFLSELQVLHDISSLLSRHKHLAKDHSPDLYSLELAGLDEIGKRYGEDSEQFRDASKIL 240
Query: 241 VDALQKFADDMYSLYGGNAVVELVTVKSFDTSLIRKTRTILEAKQAKNPASPYNLAYKYN 300
VDALQKFADDMYSLYGGNAVVELVTVKSFDTSLIRKTRTILEAKQAKNPASPYNLAYKYN
Sbjct: 241 VDALQKFADDMYSLYGGNAVVELVTVKSFDTSLIRKTRTILEAKQAKNPASPYNLAYKYN 300
Query: 301 FEYSVVFNMVLWIMIALALAVIITSYNIWNMDPGYDSIIYRMTNQKIRMD 350
FEYSVVFNMVLWIMIALALAVIITSYNIWNMDPGYDSIIYRMTNQKIRMD
Sbjct: 301 FEYSVVFNMVLWIMIALALAVIITSYNIWNMDPGYDSIIYRMTNQKIRMD 350
>gi|115496169 myosin, heavy chain 7, cardiac muscle, beta [Homo
sapiens]
Length = 1935
Score = 35.0 bits (79), Expect = 0.10
Identities = 42/180 (23%), Positives = 82/180 (45%), Gaps = 13/180 (7%)
Query: 115 SLFSEETPVVLQ-------LAPSEERVYMVGKANSVFEDLSVTLRQLRNRLFQENSVLSS 167
SL E+ + LQ LA +EER + K N + L ++++ RL E + +
Sbjct: 879 SLLQEKNDLQLQVQAEQDNLADAEERCDQLIK-NKI--QLEAKVKEMNERLEDEEEMNAE 935
Query: 168 LPLNSLSRNNEVDLLFLSELQVLHDISSLLSRHKHLAKDHSPDLYSLELAGLDEIGKRYG 227
L +E L ++ L + + + KH ++ +L E+AGLDEI +
Sbjct: 936 LTAKKRKLEDECSEL-KRDIDDLELTLAKVEKEKHATENKVKNLTE-EMAGLDEIIAKLT 993
Query: 228 EDSEQFRDASKILVDALQKFADDMYSLYGGNAVVELVTVKSFDTSLIRKTRTILEAKQAK 287
++ + ++A + +D LQ D + +L +E V + SL ++ + ++ ++AK
Sbjct: 994 KEKKALQEAHQQALDDLQAEEDKVNTLTKAKVKLE-QQVDDLEGSLEQEKKVRMDLERAK 1052
>gi|156104908 myosin heavy chain 6 [Homo sapiens]
Length = 1939
Score = 33.9 bits (76), Expect = 0.22
Identities = 42/180 (23%), Positives = 81/180 (45%), Gaps = 13/180 (7%)
Query: 115 SLFSEETPVVLQ-------LAPSEERVYMVGKANSVFEDLSVTLRQLRNRLFQENSVLSS 167
SL E+ + LQ L +EER + K N + L ++++ RL E + +
Sbjct: 881 SLLQEKNDLQLQVQAEQDNLNDAEERCDQLIK-NKI--QLEAKVKEMNERLEDEEEMNAE 937
Query: 168 LPLNSLSRNNEVDLLFLSELQVLHDISSLLSRHKHLAKDHSPDLYSLELAGLDEIGKRYG 227
L +E L ++ L + + + KH ++ +L E+AGLDEI +
Sbjct: 938 LTAKKRKLEDECSEL-KKDIDDLELTLAKVEKEKHATENKVKNLTE-EMAGLDEIIAKLT 995
Query: 228 EDSEQFRDASKILVDALQKFADDMYSLYGGNAVVELVTVKSFDTSLIRKTRTILEAKQAK 287
++ + ++A + +D LQ D + SL +E V + SL ++ + ++ ++AK
Sbjct: 996 KEKKALQEAHQQALDDLQVEEDKVNSLSKSKVKLE-QQVDDLEGSLEQEKKVRMDLERAK 1054
>gi|122937261 coiled-coil domain containing 85A [Homo sapiens]
Length = 553
Score = 31.6 bits (70), Expect = 1.1
Identities = 23/94 (24%), Positives = 43/94 (45%), Gaps = 9/94 (9%)
Query: 162 NSVLSSLPLNSLSRNNEVDLLFLSELQVLHDISSLLSRHKHLAKDHSP---------DLY 212
+S P+ LS+ ++ +LL S+ +++ + + DHS L+
Sbjct: 25 SSAAPPAPVEDLSKVSDEELLQWSKEELIRSLRRAEAEKVSAMLDHSNLIREVNRRLQLH 84
Query: 213 SLELAGLDEIGKRYGEDSEQFRDASKILVDALQK 246
E+ GL +I ++ ED+++ RD L D QK
Sbjct: 85 LGEIRGLKDINQKLQEDNQELRDLCCFLDDDRQK 118
>gi|110611903 myosin, heavy polypeptide 4, skeletal muscle [Homo
sapiens]
Length = 1939
Score = 31.2 bits (69), Expect = 1.4
Identities = 34/161 (21%), Positives = 71/161 (44%), Gaps = 6/161 (3%)
Query: 127 LAPSEERVYMVGKANSVFEDLSVTLRQLRNRLFQENSVLSSLPLNSLSRNNEVDLLFLSE 186
LA +EER + K L ++++ R E + + L +E L +
Sbjct: 902 LADAEERCDQLIKTKI---QLEAKIKEVTERAEDEEEINAELTAKKRKLEDECSEL-KKD 957
Query: 187 LQVLHDISSLLSRHKHLAKDHSPDLYSLELAGLDEIGKRYGEDSEQFRDASKILVDALQK 246
+ L + + + KH ++ +L E+AGLDE + ++ + ++A + +D LQ
Sbjct: 958 IDDLELTLAKVEKEKHATENKVKNLTE-EMAGLDETIAKLTKEKKALQEAHQQTLDDLQM 1016
Query: 247 FADDMYSLYGGNAVVELVTVKSFDTSLIRKTRTILEAKQAK 287
D + +L +E V + SL ++ + ++ ++AK
Sbjct: 1017 EEDKVNTLTKAKTKLE-QQVDDLEGSLEQEKKLCMDLERAK 1056
>gi|4759248 tryptophan hydroxylase 1 [Homo sapiens]
Length = 444
Score = 30.4 bits (67), Expect = 2.5
Identities = 27/118 (22%), Positives = 53/118 (44%), Gaps = 18/118 (15%)
Query: 107 DSVANSIHSLFSEETPVVLQLAPSEERVYMVGKANSVFEDLSVTLRQLRNRLFQENSVLS 166
D+ N HSL ++ L + V + KA +F++ V L + +R
Sbjct: 4 DNKENKDHSLERGRASLIFSL---KNEVGGLIKALKIFQEKHVNLLHIESR--------- 51
Query: 167 SLPLNSLSRNNEVDLLFLSEL--QVLHDISSLLSRHKHLAKDHSPDLYSLELAGLDEI 222
S RN+E ++ ++ + L+DI LL H ++ + PD ++L+ G++ +
Sbjct: 52 ----KSKRRNSEFEIFVDCDINREQLNDIFHLLKSHTNVLSVNLPDNFTLKEDGMETV 105
>gi|98986453 myosin, heavy chain 3, skeletal muscle, embryonic [Homo
sapiens]
Length = 1940
Score = 30.0 bits (66), Expect = 3.2
Identities = 38/163 (23%), Positives = 71/163 (43%), Gaps = 8/163 (4%)
Query: 127 LAPSEERVYMVGKANSVFEDLSVTLRQLRNRLFQENSVLSSLPLNSLSRNNEVDLLFLSE 186
L +EER + KA L ++++ R E + + L +E L +
Sbjct: 899 LLDAEERCDQLIKAKF---QLEAKIKEVTERAEDEEEINAELTAKKRKLEDECSEL-KKD 954
Query: 187 LQVLHDISSLLSRHKHLAKDHSPDLYSLELAGLDEIGKRYGEDSEQFRDASKILVDALQK 246
+ L + + + KH ++ +L EL+GLDE + + + ++A + +D LQ
Sbjct: 955 IDDLELTLAKVEKEKHATENKVKNLTE-ELSGLDETIAKLTREKKALQEAHQQALDDLQA 1013
Query: 247 FADDMYSLYGGNAVVELVTVKSFDTSL--IRKTRTILEAKQAK 287
D + SL + +E V+ ++SL +K R LE + K
Sbjct: 1014 EEDKVNSLNKTKSKLE-QQVEDLESSLEQEKKLRVDLERNKRK 1055
>gi|115527082 myosin, heavy chain 1, skeletal muscle, adult [Homo
sapiens]
Length = 1939
Score = 30.0 bits (66), Expect = 3.2
Identities = 34/161 (21%), Positives = 71/161 (44%), Gaps = 6/161 (3%)
Query: 127 LAPSEERVYMVGKANSVFEDLSVTLRQLRNRLFQENSVLSSLPLNSLSRNNEVDLLFLSE 186
LA +EER + K L ++++ R E + + L +E L +
Sbjct: 902 LADAEERCDQLIKTKI---QLEAKIKEVTERAEDEEEINAELTAKKRKLEDECSEL-KKD 957
Query: 187 LQVLHDISSLLSRHKHLAKDHSPDLYSLELAGLDEIGKRYGEDSEQFRDASKILVDALQK 246
+ L + + + KH ++ +L E+AGLDE + ++ + ++A + +D LQ
Sbjct: 958 IDDLELTLAKVEKEKHATENKVKNLTE-EMAGLDETIAKLTKEKKALQEAHQQTLDDLQA 1016
Query: 247 FADDMYSLYGGNAVVELVTVKSFDTSLIRKTRTILEAKQAK 287
D + +L +E V + SL ++ + ++ ++AK
Sbjct: 1017 EEDKVNTLTKAKIKLE-QQVDDLEGSLEQEKKIRMDLERAK 1056
>gi|153791586 myosin, heavy chain 2, skeletal muscle, adult [Homo
sapiens]
Length = 1941
Score = 30.0 bits (66), Expect = 3.2
Identities = 34/161 (21%), Positives = 71/161 (44%), Gaps = 6/161 (3%)
Query: 127 LAPSEERVYMVGKANSVFEDLSVTLRQLRNRLFQENSVLSSLPLNSLSRNNEVDLLFLSE 186
LA +EER + K L ++++ R E + + L +E L +
Sbjct: 904 LADAEERCDQLIKTKI---QLEAKIKEVTERAEDEEEINAELTAKKRKLEDECSEL-KKD 959
Query: 187 LQVLHDISSLLSRHKHLAKDHSPDLYSLELAGLDEIGKRYGEDSEQFRDASKILVDALQK 246
+ L + + + KH ++ +L E+AGLDE + ++ + ++A + +D LQ
Sbjct: 960 IDDLELTLAKVEKEKHATENKVKNLTE-EMAGLDETIAKLTKEKKALQEAHQQTLDDLQA 1018
Query: 247 FADDMYSLYGGNAVVELVTVKSFDTSLIRKTRTILEAKQAK 287
D + +L +E V + SL ++ + ++ ++AK
Sbjct: 1019 EEDKVNTLTKAKIKLE-QQVDDLEGSLEQEKKLRMDLERAK 1058
>gi|153792663 myosin, heavy chain 2, skeletal muscle, adult [Homo
sapiens]
Length = 1941
Score = 30.0 bits (66), Expect = 3.2
Identities = 34/161 (21%), Positives = 71/161 (44%), Gaps = 6/161 (3%)
Query: 127 LAPSEERVYMVGKANSVFEDLSVTLRQLRNRLFQENSVLSSLPLNSLSRNNEVDLLFLSE 186
LA +EER + K L ++++ R E + + L +E L +
Sbjct: 904 LADAEERCDQLIKTKI---QLEAKIKEVTERAEDEEEINAELTAKKRKLEDECSEL-KKD 959
Query: 187 LQVLHDISSLLSRHKHLAKDHSPDLYSLELAGLDEIGKRYGEDSEQFRDASKILVDALQK 246
+ L + + + KH ++ +L E+AGLDE + ++ + ++A + +D LQ
Sbjct: 960 IDDLELTLAKVEKEKHATENKVKNLTE-EMAGLDETIAKLTKEKKALQEAHQQTLDDLQA 1018
Query: 247 FADDMYSLYGGNAVVELVTVKSFDTSLIRKTRTILEAKQAK 287
D + +L +E V + SL ++ + ++ ++AK
Sbjct: 1019 EEDKVNTLTKAKIKLE-QQVDDLEGSLEQEKKLRMDLERAK 1058
>gi|153945790 myosin, heavy chain 8, skeletal muscle, perinatal [Homo
sapiens]
Length = 1937
Score = 29.6 bits (65), Expect = 4.2
Identities = 34/161 (21%), Positives = 72/161 (44%), Gaps = 6/161 (3%)
Query: 127 LAPSEERVYMVGKANSVFEDLSVTLRQLRNRLFQENSVLSSLPLNSLSRNNEVDLLFLSE 186
LA +EER + K N + L ++++ R +E + + L +E L +
Sbjct: 901 LADAEERCEQLIK-NKI--QLEAKIKEVTERAEEEEEINAELTAKKRKLEDECSEL-KKD 956
Query: 187 LQVLHDISSLLSRHKHLAKDHSPDLYSLELAGLDEIGKRYGEDSEQFRDASKILVDALQK 246
+ L + + + KH ++ +L E+AGLDE + ++ + ++ + +D LQ
Sbjct: 957 IDDLELTLAKVEKEKHATENKVKNLTE-EMAGLDETIAKLSKEKKALQETHQQTLDDLQA 1015
Query: 247 FADDMYSLYGGNAVVELVTVKSFDTSLIRKTRTILEAKQAK 287
D + L +E V + SL ++ + ++ ++AK
Sbjct: 1016 EEDKVNILTKAKTKLE-QQVDDLEGSLEQEKKLRMDLERAK 1055
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.319 0.135 0.385
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 11,935,890
Number of Sequences: 37866
Number of extensions: 481846
Number of successful extensions: 1284
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 1
Number of HSP's successfully gapped in prelim test: 10
Number of HSP's that attempted gapping in prelim test: 1282
Number of HSP's gapped (non-prelim): 12
length of query: 350
length of database: 18,247,518
effective HSP length: 103
effective length of query: 247
effective length of database: 14,347,320
effective search space: 3543788040
effective search space used: 3543788040
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 62 (28.5 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.