Guide to the Human Genome
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Name: ATP6AP2 Sequence: fasta or formatted (350aa) NCBI GI: 15011918
Description:

ATPase, H+ transporting, lysosomal accessory protein 2

Referenced in:

Lysosomes and Related Organelles

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.1         25           2
 C cysteine            0.0          0           0
 D aspartate           5.1         18           2
 E glutamate           5.4         19           2
 F phenylalanine       4.3         15           1
 G glycine             4.9         17           2
 H histidine           1.7          6           1
 I isoleucine          5.1         18           2
 K lysine              4.6         16           1
 L leucine            13.1         46           2
 M methionine          3.1         11           1
 N asparagine          6.0         21           2
 P proline             4.9         17           2
 Q glutamine           2.3          8           1
 R arginine            4.6         16           1
 S serine             10.3         36           2
 T threonine           2.6          9           1
 V valine             10.0         35           2
 W tryptophan          1.1          4           1
 Y tyrosine            3.7         13           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   ATPase, H+ transporting, lysosomal accessory protein... 
MYH7                  0.015   myosin, heavy chain 7, cardiac muscle, beta 
MYH6                  0.014   myosin heavy chain 6 
CCDC85A               0.011   coiled-coil domain containing 85A 
MYH4                  0.009   myosin, heavy polypeptide 4, skeletal muscle 
TPH1                  0.008   tryptophan hydroxylase 1 
MYH3                  0.008   myosin, heavy chain 3, skeletal muscle, embryonic [H...
MYH1                  0.008   myosin, heavy chain 1, skeletal muscle, adult [Homo...
MYH2                  0.008   myosin, heavy chain 2, skeletal muscle, adult [Homo...
MYH2                  0.008   myosin, heavy chain 2, skeletal muscle, adult [Homo...
MYH8                  0.008   myosin, heavy chain 8, skeletal muscle, perinatal [...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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