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Search of human proteins with 149944578
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|149944578 HEAT repeat containing 7A isoform 2 [Homo sapiens]
(422 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|149944578 HEAT repeat containing 7A isoform 2 [Homo sapiens] 814 0.0
gi|149944469 HEAT repeat containing 7A isoform 2 [Homo sapiens] 814 0.0
gi|150010654 HEAT repeat containing 7A isoform 1 [Homo sapiens] 733 0.0
gi|239741905 PREDICTED: HEAT repeat containing 7B1 [Homo sapiens] 162 7e-40
gi|239748007 PREDICTED: HEAT repeat containing 7B1 [Homo sapiens] 160 3e-39
gi|239753442 PREDICTED: HEAT repeat containing 7B1 [Homo sapiens] 150 2e-36
gi|154240671 HEAT repeat family member 7B2 [Homo sapiens] 107 2e-23
gi|148727311 hypothetical protein LOC389690 [Homo sapiens] 49 1e-05
gi|189409124 armadillo repeat containing 3 [Homo sapiens] 40 0.005
gi|27886570 mitochondrial ribosomal protein L39 isoform b [Homo ... 31 1.9
gi|27886582 mitochondrial ribosomal protein L39 isoform a [Homo ... 31 1.9
gi|239755545 PREDICTED: otogelin isoform 1 [Homo sapiens] 30 4.1
gi|239755543 PREDICTED: otogelin isoform 2 [Homo sapiens] 30 4.1
gi|239744300 PREDICTED: otogelin isoform 2 [Homo sapiens] 30 4.1
gi|239744298 PREDICTED: otogelin isoform 1 [Homo sapiens] 30 4.1
gi|209969838 transportin 2 (importin 3, karyopherin beta 2b) iso... 30 4.1
gi|209969836 transportin 2 (importin 3, karyopherin beta 2b) iso... 30 4.1
gi|48675813 transportin 2 (importin 3, karyopherin beta 2b) isof... 30 4.1
gi|239749989 PREDICTED: otogelin isoform 2 [Homo sapiens] 30 5.4
gi|239749987 PREDICTED: otogelin isoform 1 [Homo sapiens] 30 5.4
gi|22907049 aldehyde dehydrogenase 3A1 [Homo sapiens] 29 9.2
gi|206597441 aldehyde dehydrogenase 3A1 [Homo sapiens] 29 9.2
gi|206597439 aldehyde dehydrogenase 3A1 [Homo sapiens] 29 9.2
gi|62460637 importin 4 [Homo sapiens] 29 9.2
>gi|149944578 HEAT repeat containing 7A isoform 2 [Homo sapiens]
Length = 422
Score = 814 bits (2102), Expect = 0.0
Identities = 422/422 (100%), Positives = 422/422 (100%)
Query: 1 MTESSMKKLASTLLDAITDKDPLVQEQVCSALCSLGEVRPVETLRACEEYLRQHDKLAHP 60
MTESSMKKLASTLLDAITDKDPLVQEQVCSALCSLGEVRPVETLRACEEYLRQHDKLAHP
Sbjct: 1 MTESSMKKLASTLLDAITDKDPLVQEQVCSALCSLGEVRPVETLRACEEYLRQHDKLAHP 60
Query: 61 YRAAVLRAMERVLSSRASELDKDTASTIILLASSEMTKTKDLVWDWQQAASGVLVAVGRQ 120
YRAAVLRAMERVLSSRASELDKDTASTIILLASSEMTKTKDLVWDWQQAASGVLVAVGRQ
Sbjct: 61 YRAAVLRAMERVLSSRASELDKDTASTIILLASSEMTKTKDLVWDWQQAASGVLVAVGRQ 120
Query: 121 FISKVMEELLRRLHPGTLPHCAVLHTLASLSVANAFGVVPFLPSVLSSLLPVLGVAKQDT 180
FISKVMEELLRRLHPGTLPHCAVLHTLASLSVANAFGVVPFLPSVLSSLLPVLGVAKQDT
Sbjct: 121 FISKVMEELLRRLHPGTLPHCAVLHTLASLSVANAFGVVPFLPSVLSSLLPVLGVAKQDT 180
Query: 181 VRVAFCSALQRFSEGALEYLANLDRAPDPTVRKDAFATDIFSAYDVLFHQWLQSREAKLR 240
VRVAFCSALQRFSEGALEYLANLDRAPDPTVRKDAFATDIFSAYDVLFHQWLQSREAKLR
Sbjct: 181 VRVAFCSALQRFSEGALEYLANLDRAPDPTVRKDAFATDIFSAYDVLFHQWLQSREAKLR 240
Query: 241 LAVVEALGPMSHLLPSERLEEQLPKLLPGILALYKKHAETFYLSKSLGQILEAAVSVGSR 300
LAVVEALGPMSHLLPSERLEEQLPKLLPGILALYKKHAETFYLSKSLGQILEAAVSVGSR
Sbjct: 241 LAVVEALGPMSHLLPSERLEEQLPKLLPGILALYKKHAETFYLSKSLGQILEAAVSVGSR 300
Query: 301 TLETQLDALLAALHSQICVPVESSSPLVMSNQKEVLRCFTVLACSSPDRLLAFLLPRLDT 360
TLETQLDALLAALHSQICVPVESSSPLVMSNQKEVLRCFTVLACSSPDRLLAFLLPRLDT
Sbjct: 301 TLETQLDALLAALHSQICVPVESSSPLVMSNQKEVLRCFTVLACSSPDRLLAFLLPRLDT 360
Query: 361 SNERTRVGTLQVVRHVINSAGSTNTRITLMLPSAVTRLKHEDCPARAAPQPADLTAAPAS 420
SNERTRVGTLQVVRHVINSAGSTNTRITLMLPSAVTRLKHEDCPARAAPQPADLTAAPAS
Sbjct: 361 SNERTRVGTLQVVRHVINSAGSTNTRITLMLPSAVTRLKHEDCPARAAPQPADLTAAPAS 420
Query: 421 VA 422
VA
Sbjct: 421 VA 422
>gi|149944469 HEAT repeat containing 7A isoform 2 [Homo sapiens]
Length = 422
Score = 814 bits (2102), Expect = 0.0
Identities = 422/422 (100%), Positives = 422/422 (100%)
Query: 1 MTESSMKKLASTLLDAITDKDPLVQEQVCSALCSLGEVRPVETLRACEEYLRQHDKLAHP 60
MTESSMKKLASTLLDAITDKDPLVQEQVCSALCSLGEVRPVETLRACEEYLRQHDKLAHP
Sbjct: 1 MTESSMKKLASTLLDAITDKDPLVQEQVCSALCSLGEVRPVETLRACEEYLRQHDKLAHP 60
Query: 61 YRAAVLRAMERVLSSRASELDKDTASTIILLASSEMTKTKDLVWDWQQAASGVLVAVGRQ 120
YRAAVLRAMERVLSSRASELDKDTASTIILLASSEMTKTKDLVWDWQQAASGVLVAVGRQ
Sbjct: 61 YRAAVLRAMERVLSSRASELDKDTASTIILLASSEMTKTKDLVWDWQQAASGVLVAVGRQ 120
Query: 121 FISKVMEELLRRLHPGTLPHCAVLHTLASLSVANAFGVVPFLPSVLSSLLPVLGVAKQDT 180
FISKVMEELLRRLHPGTLPHCAVLHTLASLSVANAFGVVPFLPSVLSSLLPVLGVAKQDT
Sbjct: 121 FISKVMEELLRRLHPGTLPHCAVLHTLASLSVANAFGVVPFLPSVLSSLLPVLGVAKQDT 180
Query: 181 VRVAFCSALQRFSEGALEYLANLDRAPDPTVRKDAFATDIFSAYDVLFHQWLQSREAKLR 240
VRVAFCSALQRFSEGALEYLANLDRAPDPTVRKDAFATDIFSAYDVLFHQWLQSREAKLR
Sbjct: 181 VRVAFCSALQRFSEGALEYLANLDRAPDPTVRKDAFATDIFSAYDVLFHQWLQSREAKLR 240
Query: 241 LAVVEALGPMSHLLPSERLEEQLPKLLPGILALYKKHAETFYLSKSLGQILEAAVSVGSR 300
LAVVEALGPMSHLLPSERLEEQLPKLLPGILALYKKHAETFYLSKSLGQILEAAVSVGSR
Sbjct: 241 LAVVEALGPMSHLLPSERLEEQLPKLLPGILALYKKHAETFYLSKSLGQILEAAVSVGSR 300
Query: 301 TLETQLDALLAALHSQICVPVESSSPLVMSNQKEVLRCFTVLACSSPDRLLAFLLPRLDT 360
TLETQLDALLAALHSQICVPVESSSPLVMSNQKEVLRCFTVLACSSPDRLLAFLLPRLDT
Sbjct: 301 TLETQLDALLAALHSQICVPVESSSPLVMSNQKEVLRCFTVLACSSPDRLLAFLLPRLDT 360
Query: 361 SNERTRVGTLQVVRHVINSAGSTNTRITLMLPSAVTRLKHEDCPARAAPQPADLTAAPAS 420
SNERTRVGTLQVVRHVINSAGSTNTRITLMLPSAVTRLKHEDCPARAAPQPADLTAAPAS
Sbjct: 361 SNERTRVGTLQVVRHVINSAGSTNTRITLMLPSAVTRLKHEDCPARAAPQPADLTAAPAS 420
Query: 421 VA 422
VA
Sbjct: 421 VA 422
>gi|150010654 HEAT repeat containing 7A isoform 1 [Homo sapiens]
Length = 1641
Score = 733 bits (1891), Expect = 0.0
Identities = 380/382 (99%), Positives = 381/382 (99%)
Query: 1 MTESSMKKLASTLLDAITDKDPLVQEQVCSALCSLGEVRPVETLRACEEYLRQHDKLAHP 60
MTESSMKKLASTLLDAITDKDPLVQEQVCSALCSLGEVRPVETLRACEEYLRQHDKLAHP
Sbjct: 1 MTESSMKKLASTLLDAITDKDPLVQEQVCSALCSLGEVRPVETLRACEEYLRQHDKLAHP 60
Query: 61 YRAAVLRAMERVLSSRASELDKDTASTIILLASSEMTKTKDLVWDWQQAASGVLVAVGRQ 120
YRAAVLRAMERVLSSRASELDKDTASTIILLASSEMTKTKDLVWDWQQAASGVLVAVGRQ
Sbjct: 61 YRAAVLRAMERVLSSRASELDKDTASTIILLASSEMTKTKDLVWDWQQAASGVLVAVGRQ 120
Query: 121 FISKVMEELLRRLHPGTLPHCAVLHTLASLSVANAFGVVPFLPSVLSSLLPVLGVAKQDT 180
FISKVMEELLRRLHPGTLPHCAVLHTLASLSVANAFGVVPFLPSVLSSLLPVLGVAKQDT
Sbjct: 121 FISKVMEELLRRLHPGTLPHCAVLHTLASLSVANAFGVVPFLPSVLSSLLPVLGVAKQDT 180
Query: 181 VRVAFCSALQRFSEGALEYLANLDRAPDPTVRKDAFATDIFSAYDVLFHQWLQSREAKLR 240
VRVAFCSALQRFSEGALEYLANLDRAPDPTVRKDAFATDIFSAYDVLFHQWLQSREAKLR
Sbjct: 181 VRVAFCSALQRFSEGALEYLANLDRAPDPTVRKDAFATDIFSAYDVLFHQWLQSREAKLR 240
Query: 241 LAVVEALGPMSHLLPSERLEEQLPKLLPGILALYKKHAETFYLSKSLGQILEAAVSVGSR 300
LAVVEALGPMSHLLPSERLEEQLPKLLPGILALYKKHAETFYLSKSLGQILEAAVSVGSR
Sbjct: 241 LAVVEALGPMSHLLPSERLEEQLPKLLPGILALYKKHAETFYLSKSLGQILEAAVSVGSR 300
Query: 301 TLETQLDALLAALHSQICVPVESSSPLVMSNQKEVLRCFTVLACSSPDRLLAFLLPRLDT 360
TLETQLDALLAALHSQICVPVESSSPLVMSNQKEVLRCFTVLACSSPDRLLAFLLPRLDT
Sbjct: 301 TLETQLDALLAALHSQICVPVESSSPLVMSNQKEVLRCFTVLACSSPDRLLAFLLPRLDT 360
Query: 361 SNERTRVGTLQVVRHVINSAGS 382
SNERTRVGTLQVVRHVINSA +
Sbjct: 361 SNERTRVGTLQVVRHVINSAAA 382
>gi|239741905 PREDICTED: HEAT repeat containing 7B1 [Homo sapiens]
Length = 1710
Score = 162 bits (409), Expect = 7e-40
Identities = 94/303 (31%), Positives = 163/303 (53%), Gaps = 2/303 (0%)
Query: 79 ELDKDTASTIILLASSEMTKTKDLVWDWQ-QAASGVLVAVGRQFISKVMEELLRRLHPGT 137
EL++ ++ +AS EM + ++ + + AS LVA+ R S VM EL L P
Sbjct: 144 ELEEQCVQRLVAIASKEMREIPEMEGYMKAEVASDTLVALSRNHFSLVMYELQHHLKPLN 203
Query: 138 LPHCAVLHTLASLSVANAFGVVPFLPSVLSSLLPVLGVAKQDTVRVAFCSALQRFSEGAL 197
L V+ TLA L+ N F +P++ L+++ +L +A + +R A CSA++ F E
Sbjct: 204 LTDEFVIITLAKLANGNVFEFMPYMGITLATIFTMLRLANEAKIRQAICSAMETFCETVQ 263
Query: 198 EYLANLDRAPDPTVRKDAFATDIFSAYDVLFHQWLQSREAKLRLAVVEALGPM-SHLLPS 256
YL +L+ + P + ++ FA +F Y WL+ +++L V+++L PM LLP+
Sbjct: 264 FYLKHLEESVYPVMTEEEFALKVFPMYRYFVTVWLRHYNPEVKLGVIKSLKPMLGLLLPN 323
Query: 257 ERLEEQLPKLLPGILALYKKHAETFYLSKSLGQILEAAVSVGSRTLETQLDALLAALHSQ 316
+ L EQ+ +P +LA Y+ E ++++ L QILE +V+ + + QL + LH Q
Sbjct: 324 DDLREQVYDYIPLLLAEYQGSLEVLFVTQVLRQILELSVTTNTPVPQMQLHTIFTELHVQ 383
Query: 317 ICVPVESSSPLVMSNQKEVLRCFTVLACSSPDRLLAFLLPRLDTSNERTRVGTLQVVRHV 376
+C + N E++ CF LA S P L+ F +++T+ E RVGTL ++R +
Sbjct: 384 VCNKAPAQHQYSSQNLMEMVHCFVALARSYPKELMKFFFSQMETNKEAVRVGTLNLIRAI 443
Query: 377 INS 379
+++
Sbjct: 444 VSA 446
>gi|239748007 PREDICTED: HEAT repeat containing 7B1 [Homo sapiens]
Length = 1706
Score = 160 bits (404), Expect = 3e-39
Identities = 93/303 (30%), Positives = 162/303 (53%), Gaps = 2/303 (0%)
Query: 79 ELDKDTASTIILLASSEMTKTKDLVWDWQ-QAASGVLVAVGRQFISKVMEELLRRLHPGT 137
EL++ ++ +AS EM + ++ + + AS LVA+ R S VM EL L P
Sbjct: 144 ELEEQCVQRLVAIASKEMREIPEMEGYMKAEVASDTLVALSRNHFSLVMYELQHHLKPLN 203
Query: 138 LPHCAVLHTLASLSVANAFGVVPFLPSVLSSLLPVLGVAKQDTVRVAFCSALQRFSEGAL 197
L V+ TLA L+ N F +P++ L+++ +L +A + +R A CSA++ F E
Sbjct: 204 LTDEFVIITLAKLANGNVFEFMPYMGITLATIFTMLRLANEAKIRQAICSAMETFCETVQ 263
Query: 198 EYLANLDRAPDPTVRKDAFATDIFSAYDVLFHQWLQSREAKLRLAVVEALGPM-SHLLPS 256
YL +L+ + P + ++ FA +F Y WL+ +++L V+++L PM LLP+
Sbjct: 264 FYLKHLEESVYPVMTEEEFALKVFPMYRYFVTVWLRHHNPEVKLGVIKSLKPMLGLLLPN 323
Query: 257 ERLEEQLPKLLPGILALYKKHAETFYLSKSLGQILEAAVSVGSRTLETQLDALLAALHSQ 316
+ L EQ+ +P +LA Y+ E ++++ L QIL +V+ + + QL + LH Q
Sbjct: 324 DDLREQVYDYIPLLLAEYQGSLEALFVTQVLRQILGLSVTTNTPVPQMQLHTIFTELHVQ 383
Query: 317 ICVPVESSSPLVMSNQKEVLRCFTVLACSSPDRLLAFLLPRLDTSNERTRVGTLQVVRHV 376
+C + N E++ CF LA S P L+ F +++T+ E RVGTL ++R +
Sbjct: 384 VCNKAPAQHQYSSQNLMEMVHCFVALARSYPKELMKFFFSQMETNKEAVRVGTLNLIRAI 443
Query: 377 INS 379
+++
Sbjct: 444 VSA 446
>gi|239753442 PREDICTED: HEAT repeat containing 7B1 [Homo sapiens]
Length = 1723
Score = 150 bits (380), Expect = 2e-36
Identities = 95/306 (31%), Positives = 160/306 (52%), Gaps = 5/306 (1%)
Query: 79 ELDKDTASTIILLASSEMTKTKDLVWDWQ-QAASGVLVAVGRQFISKVMEELLRRLHPGT 137
EL++ ++ +AS EM + ++ + + AS LVA+ R S VM EL L P
Sbjct: 144 ELEEQCVQRLVAIASKEMREIPEMEGYMKAEVASDTLVALSRNHFSLVMYELQHHLKPLN 203
Query: 138 LPHCAVLHTLASLSVANAFGVVPFLPSVLSSLLPVLGVAKQDTVRVAFCSALQRFSEGAL 197
L V+ TLA L+ N F +P++ L+++ +L +A + +R A CSA++ F E
Sbjct: 204 LTDEFVIITLAKLANGNVFEFMPYMGITLATIFTMLRLANEAKIRQAICSAMETFCETVQ 263
Query: 198 EYLANLDRAPDPTVRKDAFATDIFSAYDVLFHQWLQSREAKLRLAVVEALGPM-SHLLPS 256
YL +L+ + P + ++ FA +F Y WL+ +++L V+++L PM LLP+
Sbjct: 264 FYLKHLEESVYPVMTEEEFALKVFPMYRYFVTVWLRHHNPEVKLGVIKSLKPMLGLLLPN 323
Query: 257 ERLEEQLPKLLPGILALY--KKHAETFYLS-KSLGQILEAAVSVGSRTLETQLDALLAAL 313
+ L EQ+ +P +LA Y K H F + L QIL +V+ + + QL + L
Sbjct: 324 DDLREQVYDYIPLLLAEYQGKGHLPPFANPLQVLRQILGLSVTTNTPVPQMQLHTIFTEL 383
Query: 314 HSQICVPVESSSPLVMSNQKEVLRCFTVLACSSPDRLLAFLLPRLDTSNERTRVGTLQVV 373
H Q+C + N E++ CF LA S P L+ F +++T+ E RVGTL ++
Sbjct: 384 HVQVCNKAPAQHQYSSQNLMEMVHCFVALARSYPKELMKFFFSQMETNKEAVRVGTLNLI 443
Query: 374 RHVINS 379
R ++++
Sbjct: 444 RAIVSA 449
>gi|154240671 HEAT repeat family member 7B2 [Homo sapiens]
Length = 1585
Score = 107 bits (267), Expect = 2e-23
Identities = 81/301 (26%), Positives = 145/301 (48%), Gaps = 5/301 (1%)
Query: 80 LDKDTASTIILLASSEMTKTKDLVWDWQQAASGVLVAVGRQFISKVMEELLRRLHPGTLP 139
LD +I AS +M + +++ + + A VLV++ + VM E+ LP
Sbjct: 47 LDDAIVQRLIYYASKDM-RDNNMLREIRMLAGEVLVSLAAHDFNSVMYEVQSNFRILELP 105
Query: 140 HCAVLHTLASLSVANAFGVVPFLPSVLSSLLPVLGVAKQDTVRVAFCSALQRFSEGALEY 199
V+ LA L+ + +PF+ L ++ +L +A+ + ++ FC AL++FS+ +Y
Sbjct: 106 DEFVVLALAELATSYVSQSIPFMMMTLLTMQTMLRLAEDERMKGTFCIALEKFSKAIYKY 165
Query: 200 LANLDRAPDPTVRKDAFATDIFSAYDVLFHQWLQSREAKLRLAVVEALGP-MSHLLPSER 258
+ + P P + + + IF + + +W L++V+A GP +S LL E
Sbjct: 166 VNHWRDFPYPRLDANRLSDKIFMLFWYIMEKWAPLASPMQTLSIVKAHGPTVSLLLHRED 225
Query: 259 LEEQLPKLLPGILALYKKHAETFYLSKSLGQILEAAVSVGSRTLETQLDALLAALHSQIC 318
+P +L YK F++++SL QIL AAV + ++ L QIC
Sbjct: 226 FRGYALGQVPWLLNQYKDKEIDFHVTQSLKQILTAAVLYDIGLPRSLRRSIFINLLQQIC 285
Query: 319 VPVESSSPLVMSNQKEVLRCFTVLACSSPDRLLAFLLPRLDTSNERTRVGTLQVVRHVIN 378
+ P V N+ + CF +LA S+P L+ F ++ ++NE RVG L ++R +N
Sbjct: 286 ---RAPEPPVKENEMKASSCFLILAHSNPGELMEFFDEQVRSNNEAIRVGILTLLRLAVN 342
Query: 379 S 379
+
Sbjct: 343 A 343
>gi|148727311 hypothetical protein LOC389690 [Homo sapiens]
Length = 1318
Score = 48.5 bits (114), Expect = 1e-05
Identities = 32/139 (23%), Positives = 64/139 (46%), Gaps = 1/139 (0%)
Query: 13 LLDAITDKDPLVQEQVCSALCSLGEVRPVETLRACEEYLRQHDKLAHPYRAAVLRAMERV 72
+L + DP + + + ++ P + +Y + +++ ++ + + +E V
Sbjct: 93 MLQDMNSADPFHLKYIIKKIKNMAHGSPKLVMETIHDYFIDNPEISSRHKFRLFQTLEMV 152
Query: 73 LSSRASELDKDTASTIILLASSEMTKTKDLVWDWQQAASGVLVAVGRQFISKVMEELLRR 132
+ + + L++ T LA MTK +L +Q AAS +LVA+ R V + L
Sbjct: 153 IGA-SDVLEETWEKTFTRLALENMTKATELEDIYQDAASNMLVAICRHSWRVVAQHLETE 211
Query: 133 LHPGTLPHCAVLHTLASLS 151
L G PH ++L+ + LS
Sbjct: 212 LLTGVFPHRSLLYVMGVLS 230
>gi|189409124 armadillo repeat containing 3 [Homo sapiens]
Length = 872
Score = 39.7 bits (91), Expect = 0.005
Identities = 56/249 (22%), Positives = 100/249 (40%), Gaps = 38/249 (15%)
Query: 185 FCSALQRFSEGALEYLANLDRAPDPTVRKDAFATDIFSAYDVLFHQWLQSREAKLRLAVV 244
+ S +Q F G LE L L +PDP V+K++ + +Q + + +L +
Sbjct: 140 YTSKVQIFEHGGLEPLIRLLSSPDPDVKKNSME---------CIYNLVQDFQCRAKLQEL 190
Query: 245 EALGPMSHLLPSERLEEQLPKLLP-GILALYKK------------HAETFYLSKSLGQIL 291
A+ P+ LL SE QL L G++A K+ H +K L +
Sbjct: 191 NAIPPILDLLKSEYPVIQLLALKTLGVIANDKESRTMLRDNQGLDHLIKILETKELNDLH 250
Query: 292 EAAVSVGSRTLETQLDALL-----AALHSQICVPVESSSPLVMSNQKEVLRCFTVLACSS 346
A++V + LE +D ++ L + S+ P + QK + T A
Sbjct: 251 IEALAVIANCLE-DMDTMVQIQQTGGLKKLLSFAENSTIPDI---QKNAAKAITKAAYDP 306
Query: 347 PDRLL-------AFLLPRLDTSNERTRVGTLQVVRHVINSAGSTNTRITLMLPSAVTRLK 399
+R L L+ L + N+ T++ Q + + ++GS + +P + LK
Sbjct: 307 ENRKLFHEQEVEKCLVALLGSENDGTKIAASQAISAMCENSGSKDFFNNQGIPQLIQLLK 366
Query: 400 HEDCPARAA 408
++ R A
Sbjct: 367 SDNEEVREA 375
>gi|27886570 mitochondrial ribosomal protein L39 isoform b [Homo
sapiens]
Length = 353
Score = 31.2 bits (69), Expect = 1.9
Identities = 22/63 (34%), Positives = 31/63 (49%), Gaps = 3/63 (4%)
Query: 198 EYLANLDRAPDPTVRKDAFATDIFSAYDVLFHQWLQSREAKLRLAVVEALGPMSHLLPSE 257
EY+ NL RAP+ V AF D+ D +W+ ++E LR +A + LP E
Sbjct: 161 EYMVNLVRAPEVPVISGAFCYDV--VLDSKLDEWMPTKE-NLRSFTKDAHALIYKDLPFE 217
Query: 258 RLE 260
LE
Sbjct: 218 TLE 220
>gi|27886582 mitochondrial ribosomal protein L39 isoform a [Homo
sapiens]
Length = 338
Score = 31.2 bits (69), Expect = 1.9
Identities = 22/63 (34%), Positives = 31/63 (49%), Gaps = 3/63 (4%)
Query: 198 EYLANLDRAPDPTVRKDAFATDIFSAYDVLFHQWLQSREAKLRLAVVEALGPMSHLLPSE 257
EY+ NL RAP+ V AF D+ D +W+ ++E LR +A + LP E
Sbjct: 161 EYMVNLVRAPEVPVISGAFCYDV--VLDSKLDEWMPTKE-NLRSFTKDAHALIYKDLPFE 217
Query: 258 RLE 260
LE
Sbjct: 218 TLE 220
>gi|239755545 PREDICTED: otogelin isoform 1 [Homo sapiens]
Length = 2852
Score = 30.0 bits (66), Expect = 4.1
Identities = 19/62 (30%), Positives = 26/62 (41%), Gaps = 9/62 (14%)
Query: 368 GTLQVVRHVINSAGSTNTRITLMLP---------SAVTRLKHEDCPARAAPQPADLTAAP 418
G ++ R + AGS N ++ P AVT H P R P LTA+P
Sbjct: 1523 GAMETTRVTVIFAGSPNITVSSRSPPAPRFPLMTKAVTVRGHGSLPVRTTPPQPSLTASP 1582
Query: 419 AS 420
+S
Sbjct: 1583 SS 1584
>gi|239755543 PREDICTED: otogelin isoform 2 [Homo sapiens]
Length = 2924
Score = 30.0 bits (66), Expect = 4.1
Identities = 19/62 (30%), Positives = 26/62 (41%), Gaps = 9/62 (14%)
Query: 368 GTLQVVRHVINSAGSTNTRITLMLP---------SAVTRLKHEDCPARAAPQPADLTAAP 418
G ++ R + AGS N ++ P AVT H P R P LTA+P
Sbjct: 1595 GAMETTRVTVIFAGSPNITVSSRSPPAPRFPLMTKAVTVRGHGSLPVRTTPPQPSLTASP 1654
Query: 419 AS 420
+S
Sbjct: 1655 SS 1656
>gi|239744300 PREDICTED: otogelin isoform 2 [Homo sapiens]
Length = 2852
Score = 30.0 bits (66), Expect = 4.1
Identities = 19/62 (30%), Positives = 26/62 (41%), Gaps = 9/62 (14%)
Query: 368 GTLQVVRHVINSAGSTNTRITLMLP---------SAVTRLKHEDCPARAAPQPADLTAAP 418
G ++ R + AGS N ++ P AVT H P R P LTA+P
Sbjct: 1523 GAMETTRVTVIFAGSPNITVSSRSPPAPRFPLMTKAVTVRGHGSLPVRTTPPQPSLTASP 1582
Query: 419 AS 420
+S
Sbjct: 1583 SS 1584
>gi|239744298 PREDICTED: otogelin isoform 1 [Homo sapiens]
Length = 2924
Score = 30.0 bits (66), Expect = 4.1
Identities = 19/62 (30%), Positives = 26/62 (41%), Gaps = 9/62 (14%)
Query: 368 GTLQVVRHVINSAGSTNTRITLMLP---------SAVTRLKHEDCPARAAPQPADLTAAP 418
G ++ R + AGS N ++ P AVT H P R P LTA+P
Sbjct: 1595 GAMETTRVTVIFAGSPNITVSSRSPPAPRFPLMTKAVTVRGHGSLPVRTTPPQPSLTASP 1654
Query: 419 AS 420
+S
Sbjct: 1655 SS 1656
>gi|209969838 transportin 2 (importin 3, karyopherin beta 2b)
isoform 1 [Homo sapiens]
Length = 897
Score = 30.0 bits (66), Expect = 4.1
Identities = 22/95 (23%), Positives = 45/95 (47%), Gaps = 6/95 (6%)
Query: 104 WDWQQAASGVLVAVGRQFISKVMEELLRRL-----HPGTLPHCAVLHTLASLSVANAFGV 158
W+ ++ ++ L + F +++ LL L HP + + + L +++ G+
Sbjct: 370 WNLRKCSAAALDVLANVFREELLPHLLPLLKGLLFHPEWVVKESGILVLGAIAEGCMQGM 429
Query: 159 VPFLPSVLSSLLPVLGVAKQDTVRVAFCSALQRFS 193
VP+LP ++ L+ L K+ VR C L R++
Sbjct: 430 VPYLPELIPHLIQCLS-DKKALVRSIACWTLSRYA 463
>gi|209969836 transportin 2 (importin 3, karyopherin beta 2b)
isoform 3 [Homo sapiens]
Length = 887
Score = 30.0 bits (66), Expect = 4.1
Identities = 22/95 (23%), Positives = 45/95 (47%), Gaps = 6/95 (6%)
Query: 104 WDWQQAASGVLVAVGRQFISKVMEELLRRL-----HPGTLPHCAVLHTLASLSVANAFGV 158
W+ ++ ++ L + F +++ LL L HP + + + L +++ G+
Sbjct: 370 WNLRKCSAAALDVLANVFREELLPHLLPLLKGLLFHPEWVVKESGILVLGAIAEGCMQGM 429
Query: 159 VPFLPSVLSSLLPVLGVAKQDTVRVAFCSALQRFS 193
VP+LP ++ L+ L K+ VR C L R++
Sbjct: 430 VPYLPELIPHLIQCLS-DKKALVRSIACWTLSRYA 463
>gi|48675813 transportin 2 (importin 3, karyopherin beta 2b) isoform
2 [Homo sapiens]
Length = 887
Score = 30.0 bits (66), Expect = 4.1
Identities = 22/95 (23%), Positives = 45/95 (47%), Gaps = 6/95 (6%)
Query: 104 WDWQQAASGVLVAVGRQFISKVMEELLRRL-----HPGTLPHCAVLHTLASLSVANAFGV 158
W+ ++ ++ L + F +++ LL L HP + + + L +++ G+
Sbjct: 370 WNLRKCSAAALDVLANVFREELLPHLLPLLKGLLFHPEWVVKESGILVLGAIAEGCMQGM 429
Query: 159 VPFLPSVLSSLLPVLGVAKQDTVRVAFCSALQRFS 193
VP+LP ++ L+ L K+ VR C L R++
Sbjct: 430 VPYLPELIPHLIQCLS-DKKALVRSIACWTLSRYA 463
>gi|239749989 PREDICTED: otogelin isoform 2 [Homo sapiens]
Length = 2852
Score = 29.6 bits (65), Expect = 5.4
Identities = 19/62 (30%), Positives = 26/62 (41%), Gaps = 9/62 (14%)
Query: 368 GTLQVVRHVINSAGSTNTRITLMLP---------SAVTRLKHEDCPARAAPQPADLTAAP 418
G ++ R + AGS N ++ P AVT H P R P LTA+P
Sbjct: 1523 GAMETTRVTVIFAGSPNITVSSRSPPAPRFPLMTKAVTVRGHGSLPVRTTPLQPSLTASP 1582
Query: 419 AS 420
+S
Sbjct: 1583 SS 1584
>gi|239749987 PREDICTED: otogelin isoform 1 [Homo sapiens]
Length = 2924
Score = 29.6 bits (65), Expect = 5.4
Identities = 19/62 (30%), Positives = 26/62 (41%), Gaps = 9/62 (14%)
Query: 368 GTLQVVRHVINSAGSTNTRITLMLP---------SAVTRLKHEDCPARAAPQPADLTAAP 418
G ++ R + AGS N ++ P AVT H P R P LTA+P
Sbjct: 1595 GAMETTRVTVIFAGSPNITVSSRSPPAPRFPLMTKAVTVRGHGSLPVRTTPLQPSLTASP 1654
Query: 419 AS 420
+S
Sbjct: 1655 SS 1656
>gi|22907049 aldehyde dehydrogenase 3A1 [Homo sapiens]
Length = 453
Score = 28.9 bits (63), Expect = 9.2
Identities = 15/77 (19%), Positives = 40/77 (51%), Gaps = 6/77 (7%)
Query: 3 ESSMKKLASTLLDAITDKDPLVQEQVCSALCSLGEVRPVETLRACEEYLRQHDKLAHPYR 62
+++ + +A T+L + + P++QE++ G V P+ +R+ EE ++ ++ P
Sbjct: 310 DAATRYIAPTILTDVDPQSPVMQEEI------FGPVLPIVCVRSLEEAIQFINQREKPLA 363
Query: 63 AAVLRAMERVLSSRASE 79
+ + ++V+ +E
Sbjct: 364 LYMFSSNDKVIKKMIAE 380
>gi|206597441 aldehyde dehydrogenase 3A1 [Homo sapiens]
Length = 453
Score = 28.9 bits (63), Expect = 9.2
Identities = 15/77 (19%), Positives = 40/77 (51%), Gaps = 6/77 (7%)
Query: 3 ESSMKKLASTLLDAITDKDPLVQEQVCSALCSLGEVRPVETLRACEEYLRQHDKLAHPYR 62
+++ + +A T+L + + P++QE++ G V P+ +R+ EE ++ ++ P
Sbjct: 310 DAATRYIAPTILTDVDPQSPVMQEEI------FGPVLPIVCVRSLEEAIQFINQREKPLA 363
Query: 63 AAVLRAMERVLSSRASE 79
+ + ++V+ +E
Sbjct: 364 LYMFSSNDKVIKKMIAE 380
>gi|206597439 aldehyde dehydrogenase 3A1 [Homo sapiens]
Length = 453
Score = 28.9 bits (63), Expect = 9.2
Identities = 15/77 (19%), Positives = 40/77 (51%), Gaps = 6/77 (7%)
Query: 3 ESSMKKLASTLLDAITDKDPLVQEQVCSALCSLGEVRPVETLRACEEYLRQHDKLAHPYR 62
+++ + +A T+L + + P++QE++ G V P+ +R+ EE ++ ++ P
Sbjct: 310 DAATRYIAPTILTDVDPQSPVMQEEI------FGPVLPIVCVRSLEEAIQFINQREKPLA 363
Query: 63 AAVLRAMERVLSSRASE 79
+ + ++V+ +E
Sbjct: 364 LYMFSSNDKVIKKMIAE 380
>gi|62460637 importin 4 [Homo sapiens]
Length = 1081
Score = 28.9 bits (63), Expect = 9.2
Identities = 25/99 (25%), Positives = 38/99 (38%), Gaps = 7/99 (7%)
Query: 114 LVAVGRQFISKVMEELLRRLHPGTLP-HCAVLHTLASLSVANAFGVVPFLPSVLSSLLPV 172
L A QF+S+++ LL + + L+ P +L L P+
Sbjct: 889 LGAASAQFVSRLLPVLLSTAQEADPEVRSNAIFGMGVLAEHGGHPAQEHFPKLLGLLFPL 948
Query: 173 LGVAKQDTVRVAFCSALQRFSEGALEYLANLDRAPDPTV 211
L + D VR C AL R +A+ R P+P V
Sbjct: 949 LARERHDRVRDNICGALARL------LMASPTRKPEPQV 981
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.319 0.131 0.371
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 14,495,385
Number of Sequences: 37866
Number of extensions: 583411
Number of successful extensions: 1723
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 16
Number of HSP's that attempted gapping in prelim test: 1702
Number of HSP's gapped (non-prelim): 37
length of query: 422
length of database: 18,247,518
effective HSP length: 105
effective length of query: 317
effective length of database: 14,271,588
effective search space: 4524093396
effective search space used: 4524093396
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 63 (28.9 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.