Guide to the Human Genome
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Name: HEATR7A Sequence: fasta or formatted (422aa) NCBI GI: 149944578
Description:

HEAT repeat containing 7A isoform 2

Referenced in:

Testes and Sperm

Other entries for this name:
alt mRNA [422aa] HEAT repeat containing 7A isoform 2
alt prot [1641aa] HEAT repeat containing 7A isoform 1
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine            11.6         49           2
 C cysteine            2.1          9           1
 D aspartate           4.5         19           1
 E glutamate           5.9         25           2
 F phenylalanine       2.6         11           1
 G glycine             3.1         13           1
 H histidine           2.6         11           1
 I isoleucine          2.4         10           2
 K lysine              4.0         17           2
 L leucine            15.6         66           2
 M methionine          1.9          8           1
 N asparagine          1.4          6           1
 P proline             5.5         23           1
 Q glutamine           4.0         17           2
 R arginine            6.4         27           2
 S serine              9.5         40           3
 T threonine           5.9         25           1
 V valine              8.8         37           2
 W tryptophan          0.7          3           1
 Y tyrosine            1.4          6           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   HEAT repeat containing 7A isoform 2 
HEATR7A               1.000   HEAT repeat containing 7A isoform 2 
HEATR7A               0.897   HEAT repeat containing 7A isoform 1 
HEATR7B1              0.174   PREDICTED: HEAT repeat containing 7B1 
HEATR7B1              0.171   PREDICTED: HEAT repeat containing 7B1 
HEATR7B1              0.158   PREDICTED: HEAT repeat containing 7B1 
HEATR7B2              0.104   HEAT repeat family member 7B2 
FLJ43860              0.030   hypothetical protein LOC389690 
ARMC3                 0.019   armadillo repeat containing 3 
MRPL39                0.008   mitochondrial ribosomal protein L39 isoform b 
MRPL39                0.008   mitochondrial ribosomal protein L39 isoform a 
OTOG                  0.006   PREDICTED: otogelin isoform 1 
OTOG                  0.006   PREDICTED: otogelin isoform 2 
OTOG                  0.006   PREDICTED: otogelin isoform 2 
OTOG                  0.006   PREDICTED: otogelin isoform 1 
TNPO2                 0.006   transportin 2 (importin 3, karyopherin beta 2b) iso...
TNPO2                 0.006   transportin 2 (importin 3, karyopherin beta 2b) iso...
TNPO2                 0.006   transportin 2 (importin 3, karyopherin beta 2b) isof...
OTOG                  0.006   PREDICTED: otogelin isoform 2 
OTOG                  0.006   PREDICTED: otogelin isoform 1 
ALDH3A1               0.005   aldehyde dehydrogenase 3A1 
ALDH3A1               0.005   aldehyde dehydrogenase 3A1 
ALDH3A1               0.005   aldehyde dehydrogenase 3A1 
IPO4                  0.005   importin 4 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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