Search of human proteins with 148806904

Search of human proteins with 148806904

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|148806904 stromal antigen 3-like 4 [Homo sapiens]
         (150 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|148806904 stromal antigen 3-like 4 [Homo sapiens]                  310   4e-85
gi|57863310 stromal antigen 3 [Homo sapiens]                          209   7e-55
gi|62243696 stromal antigen 1 [Homo sapiens]                          171   3e-43
gi|31563531 stromal antigen 2 isoform b [Homo sapiens]                165   2e-41
gi|112789530 stromal antigen 2 isoform b [Homo sapiens]               165   2e-41
gi|112789528 stromal antigen 2 isoform a [Homo sapiens]               165   2e-41
gi|112789526 stromal antigen 2 isoform a [Homo sapiens]               165   2e-41
gi|224586838 cortexin 2 [Homo sapiens]                                 28   3.8  
gi|73747887 ADAM metallopeptidase domain 12 isoform 2 preproprot...    28   3.8  
gi|73747885 ADAM metallopeptidase domain 12 isoform 1 preproprot...    28   3.8  
gi|15147219 purine-rich element binding protein B [Homo sapiens]       27   5.0  
gi|47078238 G protein pathway suppressor 1 isoform 1 [Homo sapiens]    27   6.5  
gi|210032790 hypothetical protein LOC27146 [Homo sapiens]              27   8.5  

>gi|148806904 stromal antigen 3-like 4 [Homo sapiens]
          Length = 150

 Score =  310 bits (793), Expect = 4e-85
 Identities = 150/150 (100%), Positives = 150/150 (100%)

Query: 1   MSGWIATSKTRMQDFWSLLTFSSDLVDVKDSGDYPLTAPGLSWKKFQGSFCEFVGTLVCR 60
           MSGWIATSKTRMQDFWSLLTFSSDLVDVKDSGDYPLTAPGLSWKKFQGSFCEFVGTLVCR
Sbjct: 1   MSGWIATSKTRMQDFWSLLTFSSDLVDVKDSGDYPLTAPGLSWKKFQGSFCEFVGTLVCR 60

Query: 61  CQYILLHDDFPMDNLISLLTGFSDSQVCAFCHTSTLAAMKLMTSLVRVALQLSLHEDINQ 120
           CQYILLHDDFPMDNLISLLTGFSDSQVCAFCHTSTLAAMKLMTSLVRVALQLSLHEDINQ
Sbjct: 61  CQYILLHDDFPMDNLISLLTGFSDSQVCAFCHTSTLAAMKLMTSLVRVALQLSLHEDINQ 120

Query: 121 RQYEAERNKGPGQRAPERLESLLEKHKELH 150
           RQYEAERNKGPGQRAPERLESLLEKHKELH
Sbjct: 121 RQYEAERNKGPGQRAPERLESLLEKHKELH 150


>gi|57863310 stromal antigen 3 [Homo sapiens]
          Length = 1225

 Score =  209 bits (532), Expect = 7e-55
 Identities = 104/121 (85%), Positives = 111/121 (91%)

Query: 29  KDSGDYPLTAPGLSWKKFQGSFCEFVGTLVCRCQYILLHDDFPMDNLISLLTGFSDSQVC 88
           +DSGDYPL APG SWKKFQGSFCEFV TLVC+CQY LL+D FPMD+LISLLTG SDSQV 
Sbjct: 170 EDSGDYPLIAPGPSWKKFQGSFCEFVRTLVCQCQYSLLYDGFPMDDLISLLTGLSDSQVR 229

Query: 89  AFCHTSTLAAMKLMTSLVRVALQLSLHEDINQRQYEAERNKGPGQRAPERLESLLEKHKE 148
           AF HTSTLAAMKLMTSLV+VALQLS+H+D NQRQYEAERNKGPGQRAPERLESLLEK KE
Sbjct: 230 AFRHTSTLAAMKLMTSLVKVALQLSVHQDNNQRQYEAERNKGPGQRAPERLESLLEKRKE 289

Query: 149 L 149
           L
Sbjct: 290 L 290


>gi|62243696 stromal antigen 1 [Homo sapiens]
          Length = 1258

 Score =  171 bits (432), Expect = 3e-43
 Identities = 83/121 (68%), Positives = 100/121 (82%)

Query: 29  KDSGDYPLTAPGLSWKKFQGSFCEFVGTLVCRCQYILLHDDFPMDNLISLLTGFSDSQVC 88
           +DSGDYPLT PG  WKKF+ +FCEF+G L+ +CQY +++D++ MD +ISLLTG SDSQV 
Sbjct: 157 EDSGDYPLTMPGPQWKKFRSNFCEFIGVLIRQCQYSIIYDEYMMDTVISLLTGLSDSQVR 216

Query: 89  AFCHTSTLAAMKLMTSLVRVALQLSLHEDINQRQYEAERNKGPGQRAPERLESLLEKHKE 148
           AF HTSTLAAMKLMT+LV VAL LS+H+D  QRQYEAERNK  G+RA ERLE LL+K KE
Sbjct: 217 AFRHTSTLAAMKLMTALVNVALNLSIHQDNTQRQYEAERNKMIGKRANERLELLLQKRKE 276

Query: 149 L 149
           L
Sbjct: 277 L 277


>gi|31563531 stromal antigen 2 isoform b [Homo sapiens]
          Length = 1231

 Score =  165 bits (417), Expect = 2e-41
 Identities = 83/121 (68%), Positives = 98/121 (80%)

Query: 29  KDSGDYPLTAPGLSWKKFQGSFCEFVGTLVCRCQYILLHDDFPMDNLISLLTGFSDSQVC 88
           +DSGDYPLT  G  WKKF+ SFCEF+G LV +CQY +++D++ MD +ISLLTG SDSQV 
Sbjct: 154 EDSGDYPLTMAGPQWKKFKSSFCEFIGVLVRQCQYSIIYDEYMMDTVISLLTGLSDSQVR 213

Query: 89  AFCHTSTLAAMKLMTSLVRVALQLSLHEDINQRQYEAERNKGPGQRAPERLESLLEKHKE 148
           AF HTSTLAAMKLMT+LV VAL LS++ D  QRQYEAERNK  G+RA ERLE LL+K KE
Sbjct: 214 AFRHTSTLAAMKLMTALVNVALNLSINMDNTQRQYEAERNKMIGKRANERLELLLQKRKE 273

Query: 149 L 149
           L
Sbjct: 274 L 274


>gi|112789530 stromal antigen 2 isoform b [Homo sapiens]
          Length = 1231

 Score =  165 bits (417), Expect = 2e-41
 Identities = 83/121 (68%), Positives = 98/121 (80%)

Query: 29  KDSGDYPLTAPGLSWKKFQGSFCEFVGTLVCRCQYILLHDDFPMDNLISLLTGFSDSQVC 88
           +DSGDYPLT  G  WKKF+ SFCEF+G LV +CQY +++D++ MD +ISLLTG SDSQV 
Sbjct: 154 EDSGDYPLTMAGPQWKKFKSSFCEFIGVLVRQCQYSIIYDEYMMDTVISLLTGLSDSQVR 213

Query: 89  AFCHTSTLAAMKLMTSLVRVALQLSLHEDINQRQYEAERNKGPGQRAPERLESLLEKHKE 148
           AF HTSTLAAMKLMT+LV VAL LS++ D  QRQYEAERNK  G+RA ERLE LL+K KE
Sbjct: 214 AFRHTSTLAAMKLMTALVNVALNLSINMDNTQRQYEAERNKMIGKRANERLELLLQKRKE 273

Query: 149 L 149
           L
Sbjct: 274 L 274


>gi|112789528 stromal antigen 2 isoform a [Homo sapiens]
          Length = 1268

 Score =  165 bits (417), Expect = 2e-41
 Identities = 83/121 (68%), Positives = 98/121 (80%)

Query: 29  KDSGDYPLTAPGLSWKKFQGSFCEFVGTLVCRCQYILLHDDFPMDNLISLLTGFSDSQVC 88
           +DSGDYPLT  G  WKKF+ SFCEF+G LV +CQY +++D++ MD +ISLLTG SDSQV 
Sbjct: 154 EDSGDYPLTMAGPQWKKFKSSFCEFIGVLVRQCQYSIIYDEYMMDTVISLLTGLSDSQVR 213

Query: 89  AFCHTSTLAAMKLMTSLVRVALQLSLHEDINQRQYEAERNKGPGQRAPERLESLLEKHKE 148
           AF HTSTLAAMKLMT+LV VAL LS++ D  QRQYEAERNK  G+RA ERLE LL+K KE
Sbjct: 214 AFRHTSTLAAMKLMTALVNVALNLSINMDNTQRQYEAERNKMIGKRANERLELLLQKRKE 273

Query: 149 L 149
           L
Sbjct: 274 L 274


>gi|112789526 stromal antigen 2 isoform a [Homo sapiens]
          Length = 1268

 Score =  165 bits (417), Expect = 2e-41
 Identities = 83/121 (68%), Positives = 98/121 (80%)

Query: 29  KDSGDYPLTAPGLSWKKFQGSFCEFVGTLVCRCQYILLHDDFPMDNLISLLTGFSDSQVC 88
           +DSGDYPLT  G  WKKF+ SFCEF+G LV +CQY +++D++ MD +ISLLTG SDSQV 
Sbjct: 154 EDSGDYPLTMAGPQWKKFKSSFCEFIGVLVRQCQYSIIYDEYMMDTVISLLTGLSDSQVR 213

Query: 89  AFCHTSTLAAMKLMTSLVRVALQLSLHEDINQRQYEAERNKGPGQRAPERLESLLEKHKE 148
           AF HTSTLAAMKLMT+LV VAL LS++ D  QRQYEAERNK  G+RA ERLE LL+K KE
Sbjct: 214 AFRHTSTLAAMKLMTALVNVALNLSINMDNTQRQYEAERNKMIGKRANERLELLLQKRKE 273

Query: 149 L 149
           L
Sbjct: 274 L 274


>gi|224586838 cortexin 2 [Homo sapiens]
          Length = 81

 Score = 27.7 bits (60), Expect = 3.8
 Identities = 16/45 (35%), Positives = 22/45 (48%)

Query: 22 SSDLVDVKDSGDYPLTAPGLSWKKFQGSFCEFVGTLVCRCQYILL 66
          SS  + V +   + LT    +   F G  C F+G L+ RC  ILL
Sbjct: 9  SSAKMSVNEVSAFSLTLEQKTGFAFVGILCIFLGLLIIRCFKILL 53


>gi|73747887 ADAM metallopeptidase domain 12 isoform 2 preproprotein
           [Homo sapiens]
          Length = 738

 Score = 27.7 bits (60), Expect = 3.8
 Identities = 11/34 (32%), Positives = 19/34 (55%)

Query: 55  GTLVCRCQYILLHDDFPMDNLISLLTGFSDSQVC 88
           G ++CR  ++ L DD P   L+   T  +D ++C
Sbjct: 611 GRILCRGTHVYLGDDMPDPGLVLAGTKCADGKIC 644


>gi|73747885 ADAM metallopeptidase domain 12 isoform 1 preproprotein
           [Homo sapiens]
          Length = 909

 Score = 27.7 bits (60), Expect = 3.8
 Identities = 11/34 (32%), Positives = 19/34 (55%)

Query: 55  GTLVCRCQYILLHDDFPMDNLISLLTGFSDSQVC 88
           G ++CR  ++ L DD P   L+   T  +D ++C
Sbjct: 611 GRILCRGTHVYLGDDMPDPGLVLAGTKCADGKIC 644


>gi|15147219 purine-rich element binding protein B [Homo sapiens]
          Length = 312

 Score = 27.3 bits (59), Expect = 5.0
 Identities = 11/27 (40%), Positives = 16/27 (59%)

Query: 27  DVKDSGDYPLTAPGLSWKKFQGSFCEF 53
           +VK S    +T P  +W KF G+FC +
Sbjct: 249 EVKPSYRNAITVPFKAWGKFGGAFCRY 275


>gi|47078238 G protein pathway suppressor 1 isoform 1 [Homo sapiens]
          Length = 527

 Score = 26.9 bits (58), Expect = 6.5
 Identities = 14/49 (28%), Positives = 27/49 (55%), Gaps = 3/49 (6%)

Query: 91  CHTSTLAAMKLMTSLVRVALQLSLHEDINQRQYEAERNKGPGQRAPERL 139
           C T  + A+K+  S V+    + ++E+I+++  EA R     Q AP+ +
Sbjct: 107 CPTLRVEALKMALSFVQRTFNVDMYEEIHRKLSEATREL---QNAPDAI 152


>gi|210032790 hypothetical protein LOC27146 [Homo sapiens]
          Length = 1060

 Score = 26.6 bits (57), Expect = 8.5
 Identities = 19/62 (30%), Positives = 27/62 (43%), Gaps = 2/62 (3%)

Query: 88  CAFCHTSTLAAMKLMTSLVRVALQLSLHEDINQRQYEAERNKGPGQRAPERLESLLEKHK 147
           C   +   L A+K ++ L R  LQ  L E   Q      + +   QRA   LE    +H+
Sbjct: 619 CTSNYREDLQALKQLSDLEREKLQRELQETTQQNHAMKAQLEASHQRALRMLEK--ARHQ 676

Query: 148 EL 149
           EL
Sbjct: 677 EL 678


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.322    0.134    0.415 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,785,833
Number of Sequences: 37866
Number of extensions: 218025
Number of successful extensions: 581
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 570
Number of HSP's gapped (non-prelim): 13
length of query: 150
length of database: 18,247,518
effective HSP length: 93
effective length of query: 57
effective length of database: 14,725,980
effective search space: 839380860
effective search space used: 839380860
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 57 (26.6 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.