Search of human proteins with 148806869

Search of human proteins with 148806869

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|148806869 hypothetical protein LOC26175 isoform 2 [Homo
sapiens]
         (131 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|148806894 hypothetical protein LOC26175 isoform 1 [Homo sapiens]   274   2e-74
gi|148806869 hypothetical protein LOC26175 isoform 2 [Homo sapiens]   274   2e-74
gi|4502641 chemokine (C-C motif) receptor 7 precursor [Homo sapi...    28   2.7  
gi|218084958 anoctamin 4 [Homo sapiens]                                27   3.5  
gi|38788372 aquarius [Homo sapiens]                                    27   3.5  
gi|90855771 hypothetical protein LOC55744 [Homo sapiens]               27   4.6  
gi|32140182 keratin associated protein 10-10 [Homo sapiens]            27   6.0  
gi|24429592 chondroitin sulfate N-acetylgalactosaminyltransferas...    26   7.8  
gi|19115960 progestin and adipoQ receptor family member VIII [Ho...    26   7.8  

>gi|148806894 hypothetical protein LOC26175 isoform 1 [Homo sapiens]
          Length = 169

 Score =  274 bits (700), Expect = 2e-74
 Identities = 131/131 (100%), Positives = 131/131 (100%)

Query: 1   MMNFRQRMGWIGVGLYLLASAAAFYYVFEISETYNRLALEHIQQHPEEPLEGTTWTHSLK 60
           MMNFRQRMGWIGVGLYLLASAAAFYYVFEISETYNRLALEHIQQHPEEPLEGTTWTHSLK
Sbjct: 39  MMNFRQRMGWIGVGLYLLASAAAFYYVFEISETYNRLALEHIQQHPEEPLEGTTWTHSLK 98

Query: 61  AQLLSLPFWVWTVIFLVPYLQMFLFLYSCTRADPKTVGYCIIPICLAVICNRHQAFVKAS 120
           AQLLSLPFWVWTVIFLVPYLQMFLFLYSCTRADPKTVGYCIIPICLAVICNRHQAFVKAS
Sbjct: 99  AQLLSLPFWVWTVIFLVPYLQMFLFLYSCTRADPKTVGYCIIPICLAVICNRHQAFVKAS 158

Query: 121 NQISRLQLIDT 131
           NQISRLQLIDT
Sbjct: 159 NQISRLQLIDT 169


>gi|148806869 hypothetical protein LOC26175 isoform 2 [Homo sapiens]
          Length = 131

 Score =  274 bits (700), Expect = 2e-74
 Identities = 131/131 (100%), Positives = 131/131 (100%)

Query: 1   MMNFRQRMGWIGVGLYLLASAAAFYYVFEISETYNRLALEHIQQHPEEPLEGTTWTHSLK 60
           MMNFRQRMGWIGVGLYLLASAAAFYYVFEISETYNRLALEHIQQHPEEPLEGTTWTHSLK
Sbjct: 1   MMNFRQRMGWIGVGLYLLASAAAFYYVFEISETYNRLALEHIQQHPEEPLEGTTWTHSLK 60

Query: 61  AQLLSLPFWVWTVIFLVPYLQMFLFLYSCTRADPKTVGYCIIPICLAVICNRHQAFVKAS 120
           AQLLSLPFWVWTVIFLVPYLQMFLFLYSCTRADPKTVGYCIIPICLAVICNRHQAFVKAS
Sbjct: 61  AQLLSLPFWVWTVIFLVPYLQMFLFLYSCTRADPKTVGYCIIPICLAVICNRHQAFVKAS 120

Query: 121 NQISRLQLIDT 131
           NQISRLQLIDT
Sbjct: 121 NQISRLQLIDT 131


>gi|4502641 chemokine (C-C motif) receptor 7 precursor [Homo
           sapiens]
          Length = 378

 Score = 27.7 bits (60), Expect = 2.7
 Identities = 19/71 (26%), Positives = 35/71 (49%), Gaps = 9/71 (12%)

Query: 63  LLSLPFWVWTV----IFLVPYLQMFLFLYSCTRADPKTVGYCI-----IPICLAVICNRH 113
           LL+LPFW ++     +F V + ++   +Y  +      +  CI     + I  AV  +RH
Sbjct: 108 LLTLPFWAYSAAKSWVFGVHFCKLIFAIYKMSFFSGMLLLLCISIDRYVAIVQAVSAHRH 167

Query: 114 QAFVKASNQIS 124
           +A V   +++S
Sbjct: 168 RARVLLISKLS 178


>gi|218084958 anoctamin 4 [Homo sapiens]
          Length = 920

 Score = 27.3 bits (59), Expect = 3.5
 Identities = 13/56 (23%), Positives = 28/56 (50%), Gaps = 3/56 (5%)

Query: 69  WVWTVIFLVPYLQMFLFLYSCTRADPKTVGYCI---IPICLAVICNRHQAFVKASN 121
           W   ++F   ++ +F+FLY  T  D   V   +     I +  +C+++  F++ S+
Sbjct: 321 WYTGMLFPAAFIGLFVFLYGVTTLDHSQVSKEVCQATDIIMCPVCDKYCPFMRLSD 376


>gi|38788372 aquarius [Homo sapiens]
          Length = 1485

 Score = 27.3 bits (59), Expect = 3.5
 Identities = 13/43 (30%), Positives = 22/43 (51%), Gaps = 2/43 (4%)

Query: 13   VGLYLLASAAAFYYVFEISETYNRLALEHIQQH--PEEPLEGT 53
            +GLY+ A  + F   FE++  +++L    +  H  P EP   T
Sbjct: 1299 LGLYIFARVSLFQNCFELTPAFSQLTARPLHLHIIPTEPFPTT 1341


>gi|90855771 hypothetical protein LOC55744 [Homo sapiens]
          Length = 146

 Score = 26.9 bits (58), Expect = 4.6
 Identities = 13/37 (35%), Positives = 19/37 (51%), Gaps = 3/37 (8%)

Query: 14 GLYLLASAAAFYYV---FEISETYNRLALEHIQQHPE 47
          G++     A  YY+   F     Y +LA+E +Q HPE
Sbjct: 23 GVFYAGGFAIVYYLIQKFHSRALYYKLAVEQLQSHPE 59


>gi|32140182 keratin associated protein 10-10 [Homo sapiens]
          Length = 251

 Score = 26.6 bits (57), Expect = 6.0
 Identities = 9/28 (32%), Positives = 15/28 (53%)

Query: 97  VGYCIIPICLAVICNRHQAFVKASNQIS 124
           V  C +P+C   +CN+   FV   ++ S
Sbjct: 96  VPVCCVPVCCVPVCNKPVCFVPTCSESS 123


>gi|24429592 chondroitin sulfate N-acetylgalactosaminyltransferase
          2 [Homo sapiens]
          Length = 542

 Score = 26.2 bits (56), Expect = 7.8
 Identities = 21/74 (28%), Positives = 30/74 (40%), Gaps = 16/74 (21%)

Query: 7  RMGWIGVGLYLLASAAAFYYVFE--------------ISETYNRLALEHIQQHPEEPLEG 52
          R  W+ +GL LL S   F Y+ E              + E Y +   + + Q  EE  + 
Sbjct: 11 RTHWLLLGLALLCSLVLFMYLLECAPQTDGNASLPGVVGENYGKEYYQALLQEQEEHYQ- 69

Query: 53 TTWTHSLKAQLLSL 66
           T   SLK Q+  L
Sbjct: 70 -TRATSLKRQIAQL 82


>gi|19115960 progestin and adipoQ receptor family member VIII [Homo
           sapiens]
          Length = 354

 Score = 26.2 bits (56), Expect = 7.8
 Identities = 17/69 (24%), Positives = 27/69 (39%), Gaps = 19/69 (27%)

Query: 25  YYVFEISETYNRLALEHIQQHPEEPLEGTTWTHSLKAQLLSLPFWVWTVIFLVPY----- 79
           YY F + + +N +                 WTH L A  + L FW +     +P+     
Sbjct: 64  YYFFSLFQKHNEVV--------------NVWTHLLAALAVLLRFWAFAEAEALPWASTHS 109

Query: 80  LQMFLFLYS 88
           L + LF+ S
Sbjct: 110 LPLLLFILS 118


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.330    0.140    0.459 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 4,693,435
Number of Sequences: 37866
Number of extensions: 180294
Number of successful extensions: 627
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 6
Number of HSP's that attempted gapping in prelim test: 623
Number of HSP's gapped (non-prelim): 11
length of query: 131
length of database: 18,247,518
effective HSP length: 91
effective length of query: 40
effective length of database: 14,801,712
effective search space: 592068480
effective search space used: 592068480
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.9 bits)
S2: 56 (26.2 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.