Guide to the Human Genome
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Name: PAQR8 Sequence: fasta or formatted (354aa) NCBI GI: 19115960
Description:

progestin and adipoQ receptor family member VIII

Referenced in:

Adipose Tissue
Lysosomes and Related Organelles

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine            10.2         36           3
 C cysteine            4.0         14           2
 D aspartate           2.5          9           1
 E glutamate           3.7         13           1
 F phenylalanine       7.6         27           3
 G glycine             4.2         15           1
 H histidine           4.5         16           1
 I isoleucine          4.0         14           1
 K lysine              3.1         11           2
 L leucine            13.8         49           3
 M methionine          1.1          4           1
 N asparagine          0.6          2           1
 P proline             5.1         18           1
 Q glutamine           4.5         16           2
 R arginine            5.1         18           2
 S serine              7.6         27           2
 T threonine           4.5         16           2
 V valine              5.9         21           2
 W tryptophan          2.3          8           1
 Y tyrosine            5.6         20           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   progestin and adipoQ receptor family member VIII [Ho... 
PAQR7                 0.418   progestin and adipoQ receptor family member VII [Hom...
PAQR6                 0.161   progestin and adipoQ receptor family member VI isofo...
PAQR5                 0.160   progestin and adipoQ receptor family member V [Homo...
PAQR5                 0.160   progestin and adipoQ receptor family member V [Homo...
PAQR9                 0.088   progestin and adipoQ receptor family member IX [Homo...
ADIPOR2               0.076   adiponectin receptor 2 
ADIPOR1               0.065   adiponectin receptor 1 
ADIPOR1               0.065   adiponectin receptor 1 
PAQR6                 0.062   progestin and adipoQ receptor family member VI isofo...
PAQR3                 0.049   progestin and adipoQ receptor family member III [Hom...
PAQR4                 0.014   progestin and adipoQ receptor family member IV [Homo...
ABCA3                 0.008   ATP-binding cassette, sub-family A member 3 
C17orf68              0.006   alpha accessory factor 132 
TMEM151A              0.004   transmembrane protein 151A 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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