Search of human proteins with 147900223

Search of human proteins with 147900223

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|147900223 hypothetical protein LOC284184 [Homo sapiens]
         (74 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|147900223 hypothetical protein LOC284184 [Homo sapiens]            153   3e-38
gi|169208819 PREDICTED: similar to kinase D-interacting substrat...    27   3.6  
gi|239755744 PREDICTED: similar to Putative ATP-dependent RNA he...    27   3.6  
gi|169208593 PREDICTED: similar to kinase D-interacting substrat...    27   3.6  
gi|169208169 PREDICTED: similar to kinase D-interacting substrat...    27   3.6  
gi|4504383 HGF activator preproprotein [Homo sapiens]                  27   3.6  
gi|14150070 coiled-coil-helix-coiled-coil-helix domain containin...    26   7.9  

>gi|147900223 hypothetical protein LOC284184 [Homo sapiens]
          Length = 74

 Score =  153 bits (386), Expect = 3e-38
 Identities = 74/74 (100%), Positives = 74/74 (100%)

Query: 1  MSANGAVWGRVRSRLRAFPERLAACGAEAAAYGRCVQASTAPGGRLSKDFCAREFEALRS 60
          MSANGAVWGRVRSRLRAFPERLAACGAEAAAYGRCVQASTAPGGRLSKDFCAREFEALRS
Sbjct: 1  MSANGAVWGRVRSRLRAFPERLAACGAEAAAYGRCVQASTAPGGRLSKDFCAREFEALRS 60

Query: 61 CFAAAAKKTLEGGC 74
          CFAAAAKKTLEGGC
Sbjct: 61 CFAAAAKKTLEGGC 74


>gi|169208819 PREDICTED: similar to kinase D-interacting substrate
           220 [Homo sapiens]
          Length = 380

 Score = 26.9 bits (58), Expect = 3.6
 Identities = 13/27 (48%), Positives = 15/27 (55%)

Query: 27  AEAAAYGRCVQASTAPGGRLSKDFCAR 53
           A A  +G CVQA T P GR +    AR
Sbjct: 161 AAARGHGTCVQALTGPWGRAAAAAAAR 187


>gi|239755744 PREDICTED: similar to Putative ATP-dependent RNA
          helicase DDX11-like protein [Homo sapiens]
          Length = 223

 Score = 26.9 bits (58), Expect = 3.6
 Identities = 15/46 (32%), Positives = 25/46 (54%), Gaps = 2/46 (4%)

Query: 5  GAVWGRVRSRLRAFPERLAACGAEAA--AYGRCVQASTAPGGRLSK 48
          G + GR+ +R + F E  +A   E    AY RC+QA     G++++
Sbjct: 40 GGLLGRLAARKKIFQEPKSAHQVEQVLLAYSRCIQACGQERGQVTE 85


>gi|169208593 PREDICTED: similar to kinase D-interacting substrate
           220 [Homo sapiens]
          Length = 380

 Score = 26.9 bits (58), Expect = 3.6
 Identities = 13/27 (48%), Positives = 15/27 (55%)

Query: 27  AEAAAYGRCVQASTAPGGRLSKDFCAR 53
           A A  +G CVQA T P GR +    AR
Sbjct: 161 AAARGHGTCVQALTGPWGRAAAAAAAR 187


>gi|169208169 PREDICTED: similar to kinase D-interacting substrate
           220 [Homo sapiens]
          Length = 380

 Score = 26.9 bits (58), Expect = 3.6
 Identities = 13/27 (48%), Positives = 15/27 (55%)

Query: 27  AEAAAYGRCVQASTAPGGRLSKDFCAR 53
           A A  +G CVQA T P GR +    AR
Sbjct: 161 AAARGHGTCVQALTGPWGRAAAAAAAR 187


>gi|4504383 HGF activator preproprotein [Homo sapiens]
          Length = 655

 Score = 26.9 bits (58), Expect = 3.6
 Identities = 11/22 (50%), Positives = 15/22 (68%)

Query: 31  AYGRCVQASTAPGGRLSKDFCA 52
           A+G CV+A+  PGG  + D CA
Sbjct: 144 AWGYCVEATPPPGGPAALDPCA 165


>gi|14150070 coiled-coil-helix-coiled-coil-helix domain containing
          5 [Homo sapiens]
          Length = 110

 Score = 25.8 bits (55), Expect = 7.9
 Identities = 17/57 (29%), Positives = 21/57 (36%), Gaps = 20/57 (35%)

Query: 25 CGAEAAAYGRCVQA--------------------STAPGGRLSKDFCAREFEALRSC 61
          CG E   YG+CV A                    S+ P  R  +  CA+ FEA   C
Sbjct: 12 CGRELEQYGQCVAAKPESWQRDCHYLKMSIAQCTSSHPIIRQIRQACAQPFEAFEEC 68


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.323    0.131    0.415 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 2,692,878
Number of Sequences: 37866
Number of extensions: 85475
Number of successful extensions: 381
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 375
Number of HSP's gapped (non-prelim): 7
length of query: 74
length of database: 18,247,518
effective HSP length: 46
effective length of query: 28
effective length of database: 16,505,682
effective search space: 462159096
effective search space used: 462159096
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 55 (25.8 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.