Search of human proteins with 109389364

Search of human proteins with 109389364

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|109389364 arsenic (+3 oxidation state) methyltransferase
[Homo sapiens]
         (375 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|109389364 arsenic (+3 oxidation state) methyltransferase [Hom...   767   0.0  
gi|89145417 methyltransferase like 7A [Homo sapiens]                   35   0.14 
gi|118600965 hexaprenyldihydroxybenzoate methyltransferase [Homo...    34   0.19 
gi|164663805 methyltransferase like 7B [Homo sapiens]                  33   0.42 
gi|226530908 protein-L-isoaspartate (D-aspartate) O-methyltransf...    31   2.1  
gi|27735155 poly(A)-specific ribonuclease (PARN)-like domain con...    30   2.7  
gi|116325989 hyperpolarization activated cyclic nucleotide-gated...    30   3.5  
gi|118442825 methyltransferase like 6 [Homo sapiens]                   29   6.0  
gi|33188443 microfilament and actin filament cross-linker protei...    29   7.9  
gi|33188445 microfilament and actin filament cross-linker protei...    29   7.9  

>gi|109389364 arsenic (+3 oxidation state) methyltransferase [Homo
           sapiens]
          Length = 375

 Score =  767 bits (1981), Expect = 0.0
 Identities = 375/375 (100%), Positives = 375/375 (100%)

Query: 1   MAALRDAEIQKDVQTYYGQVLKRSADLQTNGCVTTARPVPKHIREALQNVHEEVALRYYG 60
           MAALRDAEIQKDVQTYYGQVLKRSADLQTNGCVTTARPVPKHIREALQNVHEEVALRYYG
Sbjct: 1   MAALRDAEIQKDVQTYYGQVLKRSADLQTNGCVTTARPVPKHIREALQNVHEEVALRYYG 60

Query: 61  CGLVIPEHLENCWILDLGSGSGRDCYVLSQLVGEKGHVTGIDMTKGQVEVAEKYLDYHME 120
           CGLVIPEHLENCWILDLGSGSGRDCYVLSQLVGEKGHVTGIDMTKGQVEVAEKYLDYHME
Sbjct: 61  CGLVIPEHLENCWILDLGSGSGRDCYVLSQLVGEKGHVTGIDMTKGQVEVAEKYLDYHME 120

Query: 121 KYGFQASNVTFIHGYIEKLGEAGIKNESHDIVVSNCVINLVPDKQQVLQEAYRVLKHGGE 180
           KYGFQASNVTFIHGYIEKLGEAGIKNESHDIVVSNCVINLVPDKQQVLQEAYRVLKHGGE
Sbjct: 121 KYGFQASNVTFIHGYIEKLGEAGIKNESHDIVVSNCVINLVPDKQQVLQEAYRVLKHGGE 180

Query: 181 LYFSDVYTSLELPEEIRTHKVLWGECLGGALYWKELAVLAQKIGFCPPRLVTANLITIQN 240
           LYFSDVYTSLELPEEIRTHKVLWGECLGGALYWKELAVLAQKIGFCPPRLVTANLITIQN
Sbjct: 181 LYFSDVYTSLELPEEIRTHKVLWGECLGGALYWKELAVLAQKIGFCPPRLVTANLITIQN 240

Query: 241 KELERVIGDCRFVSATFRLFKHSKTGPTKRCQVIYNGGITGHEKELMFDANFTFKEGEIV 300
           KELERVIGDCRFVSATFRLFKHSKTGPTKRCQVIYNGGITGHEKELMFDANFTFKEGEIV
Sbjct: 241 KELERVIGDCRFVSATFRLFKHSKTGPTKRCQVIYNGGITGHEKELMFDANFTFKEGEIV 300

Query: 301 EVDEETAAILKNSRFAQDFLIRPIGEKLPTSGGCSALELKDIITDPFKLAEESDSMKSRC 360
           EVDEETAAILKNSRFAQDFLIRPIGEKLPTSGGCSALELKDIITDPFKLAEESDSMKSRC
Sbjct: 301 EVDEETAAILKNSRFAQDFLIRPIGEKLPTSGGCSALELKDIITDPFKLAEESDSMKSRC 360

Query: 361 VPDAAGGCCGTKKSC 375
           VPDAAGGCCGTKKSC
Sbjct: 361 VPDAAGGCCGTKKSC 375


>gi|89145417 methyltransferase like 7A [Homo sapiens]
          Length = 244

 Score = 34.7 bits (78), Expect = 0.14
 Identities = 20/67 (29%), Positives = 34/67 (50%), Gaps = 5/67 (7%)

Query: 144 IKNESHDIVVSNCVINLVPDKQQVLQEAYRVLKHGGELYFSDVYTSLELPEEIRTHKVLW 203
           + + S D+VV   V+  V +++++L+E  RVL+ GG  YF +      +  E  T    W
Sbjct: 133 VADGSVDVVVCTLVLCSVKNQERILREVCRVLRPGGAFYFME-----HVAAECSTWNYFW 187

Query: 204 GECLGGA 210
            + L  A
Sbjct: 188 QQVLDPA 194


>gi|118600965 hexaprenyldihydroxybenzoate methyltransferase [Homo
           sapiens]
          Length = 369

 Score = 34.3 bits (77), Expect = 0.19
 Identities = 34/116 (29%), Positives = 58/116 (50%), Gaps = 15/116 (12%)

Query: 74  ILDLGSGSGRDCYVLSQLVGEKG-HVTGIDMTKGQVEVAE--KYLDYHMEKYGFQASNVT 130
           ILD+G G G    +L++ +G  G  V GID     ++ A+  K  D  ++K       + 
Sbjct: 150 ILDVGCGGG----LLTEPLGRLGASVIGIDPVDENIKTAQCHKSFDPVLDK------RIE 199

Query: 131 FIHGYIEKLGEAGIKNESHDIVVSNCVINLVPDKQQVLQEAYRVLKHGGELYFSDV 186
           +    +E++ E     E+ D VV++ V+  V D +  LQ   +VLK GG L+ + +
Sbjct: 200 YRVCSLEEIVEETA--ETFDAVVASEVVEHVIDLETFLQCCCQVLKPGGSLFITTI 253


>gi|164663805 methyltransferase like 7B [Homo sapiens]
          Length = 244

 Score = 33.1 bits (74), Expect = 0.42
 Identities = 17/36 (47%), Positives = 23/36 (63%)

Query: 148 SHDIVVSNCVINLVPDKQQVLQEAYRVLKHGGELYF 183
           S D+VV   V+  V   ++VLQE  RVL+ GG L+F
Sbjct: 137 SMDVVVCTLVLCSVQSPRKVLQEVRRVLRPGGVLFF 172


>gi|226530908 protein-L-isoaspartate (D-aspartate)
           O-methyltransferase 1 [Homo sapiens]
          Length = 285

 Score = 30.8 bits (68), Expect = 2.1
 Identities = 19/51 (37%), Positives = 26/51 (50%)

Query: 59  YGCGLVIPEHLENCWILDLGSGSGRDCYVLSQLVGEKGHVTGIDMTKGQVE 109
           Y   L+  +  E    LD+GSGSG      +++VG  G V GID  K  V+
Sbjct: 125 YALELLFDQLHEGAKALDVGSGSGILTACFARMVGCTGKVIGIDHIKELVD 175


>gi|27735155 poly(A)-specific ribonuclease (PARN)-like domain
           containing 1 [Homo sapiens]
          Length = 520

 Score = 30.4 bits (67), Expect = 2.7
 Identities = 18/58 (31%), Positives = 27/58 (46%), Gaps = 11/58 (18%)

Query: 121 KYGFQASNVTFIHGY-----------IEKLGEAGIKNESHDIVVSNCVINLVPDKQQV 167
           ++ FQAS+V F++ Y           I  + E   K   HDI+  N  +   PDK Q+
Sbjct: 93  EFSFQASSVQFLNQYGFNYNKFLKNGIPYMNEEQEKKIRHDILTGNWRVRSSPDKDQI 150


>gi|116325989 hyperpolarization activated cyclic nucleotide-gated
           potassium channel 1 [Homo sapiens]
          Length = 890

 Score = 30.0 bits (66), Expect = 3.5
 Identities = 30/112 (26%), Positives = 42/112 (37%), Gaps = 20/112 (17%)

Query: 60  GCGLVIPEHLENCWILDLGSGSGRDCYVLSQLVGEKGHVT----GIDMTKGQVEVAEKYL 115
           G G   P  + + WI  L    G  CY +       GH T     +D ++ Q +   K +
Sbjct: 360 GYGAQAPVSMSDLWITMLSMIVGATCYAMF-----VGHATALIQSLDSSRRQYQEKYKQV 414

Query: 116 DYHMEKYGFQASNVTFIHGYIEK------LGEAGIKNESHD-----IVVSNC 156
           + +M  +   A     IH Y E         E  I NE +D     IV  NC
Sbjct: 415 EQYMSFHKLPADMRQKIHDYYEHRYQGKIFDEENILNELNDPLREEIVNFNC 466


>gi|118442825 methyltransferase like 6 [Homo sapiens]
          Length = 284

 Score = 29.3 bits (64), Expect = 6.0
 Identities = 19/41 (46%), Positives = 25/41 (60%), Gaps = 2/41 (4%)

Query: 147 ESHDIVVSNCVINLV-PDKQQ-VLQEAYRVLKHGGELYFSD 185
           ES D+V+   V++ V PDK   VLQ  Y+VLK G  + F D
Sbjct: 149 ESVDVVMLIFVLSAVHPDKMHLVLQNIYKVLKPGKSVLFRD 189


>gi|33188443 microfilament and actin filament cross-linker protein
            isoform b [Homo sapiens]
          Length = 5938

 Score = 28.9 bits (63), Expect = 7.9
 Identities = 26/107 (24%), Positives = 49/107 (45%), Gaps = 7/107 (6%)

Query: 73   WILDLGSGSGRDCYVLSQLVGEKGHVTGIDMTKGQVEVAEKYLDYHM--EKYGFQASNVT 130
            W+  +GS  G+   +L+ L G +  ++G  + KG ++  + Y+  +   EK   Q   + 
Sbjct: 2193 WVTSVGSSGGQ---LLTNLPGME-QLSGASLEKGALDTTDGYMGVNQAPEKLDKQCEMMK 2248

Query: 131  FIHGYIEKLGEAGI-KNESHDIVVSNCVINLVPDKQQVLQEAYRVLK 176
              H  +    +  I   +S    +     NL P++QQ+LQ+    LK
Sbjct: 2249 ARHQELLSQQQNFILATQSAQAFLDQHGHNLTPEEQQMLQQKLGELK 2295


>gi|33188445 microfilament and actin filament cross-linker protein
            isoform a [Homo sapiens]
          Length = 5430

 Score = 28.9 bits (63), Expect = 7.9
 Identities = 26/107 (24%), Positives = 49/107 (45%), Gaps = 7/107 (6%)

Query: 73   WILDLGSGSGRDCYVLSQLVGEKGHVTGIDMTKGQVEVAEKYLDYHM--EKYGFQASNVT 130
            W+  +GS  G+   +L+ L G +  ++G  + KG ++  + Y+  +   EK   Q   + 
Sbjct: 1691 WVTSVGSSGGQ---LLTNLPGME-QLSGASLEKGALDTTDGYMGVNQAPEKLDKQCEMMK 1746

Query: 131  FIHGYIEKLGEAGI-KNESHDIVVSNCVINLVPDKQQVLQEAYRVLK 176
              H  +    +  I   +S    +     NL P++QQ+LQ+    LK
Sbjct: 1747 ARHQELLSQQQNFILATQSAQAFLDQHGHNLTPEEQQMLQQKLGELK 1793


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.319    0.137    0.414 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 14,380,364
Number of Sequences: 37866
Number of extensions: 622308
Number of successful extensions: 1278
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 6
Number of HSP's that attempted gapping in prelim test: 1274
Number of HSP's gapped (non-prelim): 10
length of query: 375
length of database: 18,247,518
effective HSP length: 104
effective length of query: 271
effective length of database: 14,309,454
effective search space: 3877862034
effective search space used: 3877862034
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 63 (28.9 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.