Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Search of human proteins with 14249394
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|14249394 glyoxalase domain containing 1 [Homo sapiens]
(371 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|14249394 glyoxalase domain containing 1 [Homo sapiens] 751 0.0
gi|4504477 4-hydroxyphenylpyruvate dioxygenase [Homo sapiens] 98 1e-20
gi|169178458 PREDICTED: hemicentin 2 [Homo sapiens] 33 0.31
gi|239749684 PREDICTED: hemicentin 2 [Homo sapiens] 33 0.31
gi|169177000 PREDICTED: hemicentin 2 [Homo sapiens] 33 0.31
gi|239757962 PREDICTED: hypothetical protein [Homo sapiens] 30 2.7
gi|188595687 gamma filamin isoform b [Homo sapiens] 29 5.9
gi|116805322 gamma filamin isoform a [Homo sapiens] 29 5.9
gi|239757043 PREDICTED: functional smad suppressing element 18 [... 29 5.9
gi|239751555 PREDICTED: functional smad suppressing element 18 [... 29 5.9
gi|239746067 PREDICTED: functional smad suppressing element 18 [... 29 5.9
>gi|14249394 glyoxalase domain containing 1 [Homo sapiens]
Length = 371
Score = 751 bits (1940), Expect = 0.0
Identities = 371/371 (100%), Positives = 371/371 (100%)
Query: 1 MAAPALRLCHIAFHVPAGQPLARNLQRLFGFQPLASREVDGWRQLALRSGDAVFLVNEGA 60
MAAPALRLCHIAFHVPAGQPLARNLQRLFGFQPLASREVDGWRQLALRSGDAVFLVNEGA
Sbjct: 1 MAAPALRLCHIAFHVPAGQPLARNLQRLFGFQPLASREVDGWRQLALRSGDAVFLVNEGA 60
Query: 61 GSGEPLYGLDPRHAVPSATNLCFDVADAGAATRELAALGCSVPVPPVRVRDAQGAATYAV 120
GSGEPLYGLDPRHAVPSATNLCFDVADAGAATRELAALGCSVPVPPVRVRDAQGAATYAV
Sbjct: 61 GSGEPLYGLDPRHAVPSATNLCFDVADAGAATRELAALGCSVPVPPVRVRDAQGAATYAV 120
Query: 121 VSSPAGILSLTLLERAGYRGPFLPGFRPVSSAPGPGWVSRVDHLTLACTPGSSPTLLRWF 180
VSSPAGILSLTLLERAGYRGPFLPGFRPVSSAPGPGWVSRVDHLTLACTPGSSPTLLRWF
Sbjct: 121 VSSPAGILSLTLLERAGYRGPFLPGFRPVSSAPGPGWVSRVDHLTLACTPGSSPTLLRWF 180
Query: 181 HDCLGFCHLPLSPGEDPELGLEMTAGFGLGGLRLTALQAQPGSIVPTLVLAESLPGATTR 240
HDCLGFCHLPLSPGEDPELGLEMTAGFGLGGLRLTALQAQPGSIVPTLVLAESLPGATTR
Sbjct: 181 HDCLGFCHLPLSPGEDPELGLEMTAGFGLGGLRLTALQAQPGSIVPTLVLAESLPGATTR 240
Query: 241 QDQVEQFLARHKGPGLQHVGLYTPNIVEATEGVATAGGQFLAPPGAYYQQPGKERQIRAA 300
QDQVEQFLARHKGPGLQHVGLYTPNIVEATEGVATAGGQFLAPPGAYYQQPGKERQIRAA
Sbjct: 241 QDQVEQFLARHKGPGLQHVGLYTPNIVEATEGVATAGGQFLAPPGAYYQQPGKERQIRAA 300
Query: 301 GHEPHLLARQGILLDGDKGKFLLQVFTKSLFTEDTFFLELIQRQGATGFGQGNIRALWQS 360
GHEPHLLARQGILLDGDKGKFLLQVFTKSLFTEDTFFLELIQRQGATGFGQGNIRALWQS
Sbjct: 301 GHEPHLLARQGILLDGDKGKFLLQVFTKSLFTEDTFFLELIQRQGATGFGQGNIRALWQS 360
Query: 361 VQEQSARSQEA 371
VQEQSARSQEA
Sbjct: 361 VQEQSARSQEA 371
>gi|4504477 4-hydroxyphenylpyruvate dioxygenase [Homo sapiens]
Length = 393
Score = 97.8 bits (242), Expect = 1e-20
Identities = 89/347 (25%), Positives = 161/347 (46%), Gaps = 25/347 (7%)
Query: 30 GFQPLASREVD-GWRQLA---LRSGDAVFLVNEGAGSGEPLYGLDPRHAVPSATNLCFDV 85
GF+PLA R ++ G R++ ++ G VF+++ G ++ F+V
Sbjct: 41 GFEPLAYRGLETGSREVVSHVIKQGKIVFVLSSALNPWNKEMGDHLVKHGDGVKDIAFEV 100
Query: 86 ADAGAATRELAALGCSVPVPPVRVRDAQGAATYAVVSSPAGILSLTLLERAGYRGPFLPG 145
D ++ G + P +D G +AV+ + G + TL+E+ Y G FLPG
Sbjct: 101 EDCDYIVQKARERGAKIMREPWVEQDKFGKVKFAVLQT-YGDTTHTLVEKMNYIGQFLPG 159
Query: 146 FR------PVSSAPGPGWVSRVDHLTLACTPGSSPTLLRWFHDCLGFCHLPLSPGEDPEL 199
+ P+ + +DH+ + W+ L F H S +D ++
Sbjct: 160 YEAPAFMDPLLPKLPKCSLEMIDHIVGNQPDQEMVSASEWYLKNLQF-HRFWSV-DDTQV 217
Query: 200 GLEMTAGFGLGGLRLTALQAQPGSIVPTLVLAESLPGATTRQDQVEQFLARHKGPGLQHV 259
E ++ LR + SI + + E PG ++ Q+++++ + G G+QH+
Sbjct: 218 HTEYSS------LRSIVVANYEESI--KMPINEPAPGK--KKSQIQEYVDYNGGAGVQHI 267
Query: 260 GLYTPNIVEATEGVATAGGQFLAPPGAYYQQPGKERQIRAAGHEPHL--LARQGILLDGD 317
L T +I+ A + G +FL+ P YY+Q ++ + + ++ L IL+D D
Sbjct: 268 ALKTEDIITAIRHLRERGLEFLSVPSTYYKQLREKLKTAKIKVKENIDALEELKILVDYD 327
Query: 318 KGKFLLQVFTKSLFTEDTFFLELIQRQGATGFGQGNIRALWQSVQEQ 364
+ +LLQ+FTK + T FLE+IQR GFG GN +L+++ +E+
Sbjct: 328 EKGYLLQIFTKPVQDRPTLFLEVIQRHNHQGFGAGNFNSLFKAFEEE 374
>gi|169178458 PREDICTED: hemicentin 2 [Homo sapiens]
Length = 3874
Score = 33.5 bits (75), Expect = 0.31
Identities = 67/243 (27%), Positives = 93/243 (38%), Gaps = 39/243 (16%)
Query: 107 VRVRDAQ--GAATY-AVVSSPAGILSLTLLERAGYRGPFLPGFRPVSSAPGPGWVSRVDH 163
+R+ AQ A +Y V S+ AG L R G R P S PGP V+
Sbjct: 750 LRIEQAQLSDAGSYRCVASNVAGSTEL----RYGLRVNVPPRITLPPSLPGPVLVNTPVR 805
Query: 164 LTLACTPGSSPTLLRWFHDCLGFCHLPLSPGEDPELGLEMTAGFGLGGLRLTALQAQPGS 223
LT T SPTL+ W D P+SP P GL++ GG LT A+
Sbjct: 806 LTCNATGAPSPTLM-WLKD-----GNPVSPAGTP--GLQVFP----GGRVLTLASARASD 853
Query: 224 IVPTLVLAESLPGATTRQDQVEQFLARHKGPGLQHVGLYTPNIVEATEGVA-TAGGQFLA 282
+A S G +D+ + L H P + +G V A E VA +
Sbjct: 854 SGRYSCVAVSAVG----EDRQDVVLQVHMPPSI--LGEELNVSVVANESVALECQSHAMP 907
Query: 283 PPGAYYQQPGKERQIRAAGHEPHLLARQGILLDGDKGKFLLQVFTKSLFTEDTFFLELIQ 342
PP + + G+ L R G+ L DK LLQV ++ + E +
Sbjct: 908 PPVLSWWKDGRP-----------LEPRPGVHLSADKA--LLQVDRADVWDAGHYTCEALN 954
Query: 343 RQG 345
+ G
Sbjct: 955 QAG 957
>gi|239749684 PREDICTED: hemicentin 2 [Homo sapiens]
Length = 5065
Score = 33.5 bits (75), Expect = 0.31
Identities = 67/243 (27%), Positives = 93/243 (38%), Gaps = 39/243 (16%)
Query: 107 VRVRDAQ--GAATY-AVVSSPAGILSLTLLERAGYRGPFLPGFRPVSSAPGPGWVSRVDH 163
+R+ AQ A +Y V S+ AG L R G R P S PGP V+
Sbjct: 1941 LRIEQAQLSDAGSYRCVASNVAGSTEL----RYGLRVNVPPRITLPPSLPGPVLVNTPVR 1996
Query: 164 LTLACTPGSSPTLLRWFHDCLGFCHLPLSPGEDPELGLEMTAGFGLGGLRLTALQAQPGS 223
LT T SPTL+ W D P+SP P GL++ GG LT A+
Sbjct: 1997 LTCNATGAPSPTLM-WLKD-----GNPVSPAGTP--GLQVFP----GGRVLTLASARASD 2044
Query: 224 IVPTLVLAESLPGATTRQDQVEQFLARHKGPGLQHVGLYTPNIVEATEGVA-TAGGQFLA 282
+A S G +D+ + L H P + +G V A E VA +
Sbjct: 2045 SGRYSCVAVSAVG----EDRQDVVLQVHMPPSI--LGEELNVSVVANESVALECQSHAMP 2098
Query: 283 PPGAYYQQPGKERQIRAAGHEPHLLARQGILLDGDKGKFLLQVFTKSLFTEDTFFLELIQ 342
PP + + G+ L R G+ L DK LLQV ++ + E +
Sbjct: 2099 PPVLSWWKDGRP-----------LEPRPGVHLSADKA--LLQVDRADVWDAGHYTCEALN 2145
Query: 343 RQG 345
+ G
Sbjct: 2146 QAG 2148
>gi|169177000 PREDICTED: hemicentin 2 [Homo sapiens]
Length = 3783
Score = 33.5 bits (75), Expect = 0.31
Identities = 67/243 (27%), Positives = 93/243 (38%), Gaps = 39/243 (16%)
Query: 107 VRVRDAQ--GAATY-AVVSSPAGILSLTLLERAGYRGPFLPGFRPVSSAPGPGWVSRVDH 163
+R+ AQ A +Y V S+ AG L R G R P S PGP V+
Sbjct: 659 LRIEQAQLSDAGSYRCVASNVAGSTEL----RYGLRVNVPPRITLPPSLPGPVLVNTPVR 714
Query: 164 LTLACTPGSSPTLLRWFHDCLGFCHLPLSPGEDPELGLEMTAGFGLGGLRLTALQAQPGS 223
LT T SPTL+ W D P+SP P GL++ GG LT A+
Sbjct: 715 LTCNATGAPSPTLM-WLKD-----GNPVSPAGTP--GLQVFP----GGRVLTLASARASD 762
Query: 224 IVPTLVLAESLPGATTRQDQVEQFLARHKGPGLQHVGLYTPNIVEATEGVA-TAGGQFLA 282
+A S G +D+ + L H P + +G V A E VA +
Sbjct: 763 SGRYSCVAVSAVG----EDRQDVVLQVHMPPSI--LGEELNVSVVANESVALECQSHAMP 816
Query: 283 PPGAYYQQPGKERQIRAAGHEPHLLARQGILLDGDKGKFLLQVFTKSLFTEDTFFLELIQ 342
PP + + G+ L R G+ L DK LLQV ++ + E +
Sbjct: 817 PPVLSWWKDGRP-----------LEPRPGVHLSADKA--LLQVDRADVWDAGHYTCEALN 863
Query: 343 RQG 345
+ G
Sbjct: 864 QAG 866
>gi|239757962 PREDICTED: hypothetical protein [Homo sapiens]
Length = 136
Score = 30.4 bits (67), Expect = 2.7
Identities = 23/79 (29%), Positives = 38/79 (48%), Gaps = 10/79 (12%)
Query: 162 DHLTLACTPGSSPTLLRWFHDCLGFCHLPLSPGEDPELGLEMTAGFGLGGLRLTALQAQP 221
+ + + TP S +L + + G+C ++P L M+ F GGL TA +AQ
Sbjct: 25 NEIIVTATPSCSRSLAA-YTELQGYC------SQNPRKELAMSLPFSGGGLATTAEEAQK 77
Query: 222 ---GSIVPTLVLAESLPGA 237
GS + ++A + PGA
Sbjct: 78 RRWGSSLTCSMMAATFPGA 96
>gi|188595687 gamma filamin isoform b [Homo sapiens]
Length = 2692
Score = 29.3 bits (64), Expect = 5.9
Identities = 22/61 (36%), Positives = 29/61 (47%), Gaps = 3/61 (4%)
Query: 65 PLYGLDPRHAVPSATNLCFDVADAGAATRELAALGCSVPVPPVRVRDAQGAATYAVVSSP 124
P G R VP + D + AG A ++A LG + PV VRD G T+ V +P
Sbjct: 1451 PGLGAGVRARVPQTFTV--DCSQAGRAPLQVAVLGPTGVAEPVEVRD-NGDGTHTVHYTP 1507
Query: 125 A 125
A
Sbjct: 1508 A 1508
>gi|116805322 gamma filamin isoform a [Homo sapiens]
Length = 2725
Score = 29.3 bits (64), Expect = 5.9
Identities = 22/61 (36%), Positives = 29/61 (47%), Gaps = 3/61 (4%)
Query: 65 PLYGLDPRHAVPSATNLCFDVADAGAATRELAALGCSVPVPPVRVRDAQGAATYAVVSSP 124
P G R VP + D + AG A ++A LG + PV VRD G T+ V +P
Sbjct: 1451 PGLGAGVRARVPQTFTV--DCSQAGRAPLQVAVLGPTGVAEPVEVRD-NGDGTHTVHYTP 1507
Query: 125 A 125
A
Sbjct: 1508 A 1508
>gi|239757043 PREDICTED: functional smad suppressing element 18
[Homo sapiens]
Length = 996
Score = 29.3 bits (64), Expect = 5.9
Identities = 35/110 (31%), Positives = 40/110 (36%), Gaps = 20/110 (18%)
Query: 74 AVPSATNLCFDVADAGAATRELAALGCSVPVPPVRVRDAQGAATYAVVSS---PAGILSL 130
A +A +LC DAGAA L G GAA A +S PAG
Sbjct: 413 AAAAAFSLCHKKEDAGAAAEALGGAGAG----------GAGAAPKAGLSGLFWPAGRKDA 462
Query: 131 TLLERAGYRGPFLPGFRPVSS--APGPGWVSRVDHLTLACTPGSSPTLLR 178
+ P PG PV + P P S L C G SP LLR
Sbjct: 463 FYPPFCMFWPPRTPGGLPVPTYLQPPPQPPS-----ALGCALGESPALLR 507
>gi|239751555 PREDICTED: functional smad suppressing element 18
[Homo sapiens]
Length = 1252
Score = 29.3 bits (64), Expect = 5.9
Identities = 35/110 (31%), Positives = 40/110 (36%), Gaps = 20/110 (18%)
Query: 74 AVPSATNLCFDVADAGAATRELAALGCSVPVPPVRVRDAQGAATYAVVSS---PAGILSL 130
A +A +LC DAGAA L G GAA A +S PAG
Sbjct: 413 AAAAAFSLCHKKEDAGAAAEALGGAGAG----------GAGAAPKAGLSGLFWPAGRKDA 462
Query: 131 TLLERAGYRGPFLPGFRPVSS--APGPGWVSRVDHLTLACTPGSSPTLLR 178
+ P PG PV + P P S L C G SP LLR
Sbjct: 463 FYPPFCMFWPPRTPGGLPVPTYLQPPPQPPS-----ALGCALGESPALLR 507
>gi|239746067 PREDICTED: functional smad suppressing element 18
[Homo sapiens]
Length = 1252
Score = 29.3 bits (64), Expect = 5.9
Identities = 35/110 (31%), Positives = 40/110 (36%), Gaps = 20/110 (18%)
Query: 74 AVPSATNLCFDVADAGAATRELAALGCSVPVPPVRVRDAQGAATYAVVSS---PAGILSL 130
A +A +LC DAGAA L G GAA A +S PAG
Sbjct: 413 AAAAAFSLCHKKEDAGAAAEALGGAGAG----------GAGAAPKAGLSGLFWPAGRKDA 462
Query: 131 TLLERAGYRGPFLPGFRPVSS--APGPGWVSRVDHLTLACTPGSSPTLLR 178
+ P PG PV + P P S L C G SP LLR
Sbjct: 463 FYPPFCMFWPPRTPGGLPVPTYLQPPPQPPS-----ALGCALGESPALLR 507
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.320 0.138 0.425
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 16,389,069
Number of Sequences: 37866
Number of extensions: 843836
Number of successful extensions: 1798
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 9
Number of HSP's that attempted gapping in prelim test: 1792
Number of HSP's gapped (non-prelim): 17
length of query: 371
length of database: 18,247,518
effective HSP length: 104
effective length of query: 267
effective length of database: 14,309,454
effective search space: 3820624218
effective search space used: 3820624218
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 63 (28.9 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.