Guide to the Human Genome
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Name: NT5M Sequence: fasta or formatted (228aa) NCBI GI: 9910372
Description:

5',3'-nucleotidase, mitochondrial precursor

Referenced in:

Mitochondria
Nucleotide Pathways

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             9.2         21           2
 C cysteine            2.6          6           1
 D aspartate           6.6         15           2
 E glutamate           6.1         14           1
 F phenylalanine       6.1         14           3
 G glycine             7.9         18           2
 H histidine           1.8          4           1
 I isoleucine          4.4         10           1
 K lysine              4.8         11           1
 L leucine            10.1         23           2
 M methionine          1.8          4           1
 N asparagine          1.3          3           1
 P proline             6.6         15           2
 Q glutamine           3.1          7           1
 R arginine            8.8         20           3
 S serine              4.8         11           1
 T threonine           3.1          7           1
 V valine              5.7         13           2
 W tryptophan          3.1          7           1
 Y tyrosine            2.2          5           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   5',3'-nucleotidase, mitochondrial precursor 
NT5C                  0.519   5',3'-nucleotidase, cytosolic 
MYH13                 0.011   myosin, heavy polypeptide 13, skeletal muscle [Homo...
MACF1                 0.009   microfilament and actin filament cross-linker protei...
MACF1                 0.009   microfilament and actin filament cross-linker protei...
C6orf222              0.009   hypothetical protein LOC389384 
LOC100291906          0.007   PREDICTED: hypothetical protein XP_002346331 
LOC100289015          0.007   PREDICTED: hypothetical protein 
LOC100289015          0.007   PREDICTED: hypothetical protein XP_002343849 
ADAMTS5               0.007   ADAM metallopeptidase with thrombospondin type 1 mo...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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