BLASTP 2.2.11 [Jun-05-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= gi|98162668 hypothetical protein LOC56063 [Homo sapiens] (140 letters) Database: hs.faa 37,866 sequences; 18,247,518 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gi|98162668 hypothetical protein LOC56063 [Homo sapiens] 271 2e-73 gi|153792564 solute carrier family 47, member 2 isoform 2 [Homo ... 32 0.13 gi|38261960 solute carrier family 47, member 2 isoform 1 [Homo s... 32 0.13 gi|156627569 solute carrier family 34 (sodium phosphate), member... 29 1.1 gi|19743869 Fc alpha receptor isoform h [Homo sapiens] 28 3.2 gi|19743867 Fc alpha receptor isoform g [Homo sapiens] 28 3.2 gi|19743863 Fc alpha receptor isoform e [Homo sapiens] 28 3.2 gi|19743861 Fc alpha receptor isoform d [Homo sapiens] 28 3.2 gi|19743859 Fc alpha receptor isoform c precursor [Homo sapiens] 28 3.2 gi|19743857 Fc alpha receptor isoform b precursor [Homo sapiens] 28 3.2 gi|4503673 Fc alpha receptor isoform a precursor [Homo sapiens] 28 3.2 gi|166197666 putative homeodomain transcription factor 1 [Homo s... 27 7.1 gi|171543850 RUN domain containing 1 [Homo sapiens] 27 7.1 gi|239787844 testis expressed 10 isoform 2 [Homo sapiens] 26 9.3 gi|239787838 testis expressed 10 isoform 1 [Homo sapiens] 26 9.3 gi|4505463 contactin associated protein 1 precursor [Homo sapiens] 26 9.3 gi|157266307 aquaporin 9 [Homo sapiens] 26 9.3 >gi|98162668 hypothetical protein LOC56063 [Homo sapiens] Length = 140 Score = 271 bits (692), Expect = 2e-73 Identities = 140/140 (100%), Positives = 140/140 (100%) Query: 1 MAASLGQVLALVLVAALWGGTQPLLKRASAGLQRVHEPTWAQQLLQEMKTLFLNTEYLMP 60 MAASLGQVLALVLVAALWGGTQPLLKRASAGLQRVHEPTWAQQLLQEMKTLFLNTEYLMP Sbjct: 1 MAASLGQVLALVLVAALWGGTQPLLKRASAGLQRVHEPTWAQQLLQEMKTLFLNTEYLMP 60 Query: 61 FLLNQCGSLLYYLTLASTDLTLAVPICNSLAIIFTLIVGKALGEDIGGKRAVAGMVLTVI 120 FLLNQCGSLLYYLTLASTDLTLAVPICNSLAIIFTLIVGKALGEDIGGKRAVAGMVLTVI Sbjct: 61 FLLNQCGSLLYYLTLASTDLTLAVPICNSLAIIFTLIVGKALGEDIGGKRAVAGMVLTVI 120 Query: 121 GISLCITSSVSKTQGQQSTL 140 GISLCITSSVSKTQGQQSTL Sbjct: 121 GISLCITSSVSKTQGQQSTL 140 >gi|153792564 solute carrier family 47, member 2 isoform 2 [Homo sapiens] Length = 566 Score = 32.3 bits (72), Expect = 0.13 Identities = 38/128 (29%), Positives = 58/128 (45%), Gaps = 27/128 (21%) Query: 32 LQRVHEPTWA---QQLLQEMKTLFLNTEYLMPFLLNQC--------GSLLYYLTLASTDL 80 L+++H TWA Q LQ+ F +P +L C GS L L L+ DL Sbjct: 233 LKKLHLETWAGWSSQCLQDWGPFF---SLAVPSMLMICVEWWAYEIGSFLMGL-LSVVDL 288 Query: 81 ----------TLAVPICNSLAIIFTLIVGKALG--EDIGGKRAVAGMVLTVIGISLCITS 128 T+ I L+I + VG ALG + + KR+ VL+++GISL + + Sbjct: 289 SAQAVIYEVATVTYMIPLGLSIGVCVRVGMALGAADTVQAKRSAVSGVLSIVGISLVLGT 348 Query: 129 SVSKTQGQ 136 +S + Q Sbjct: 349 LISILKNQ 356 >gi|38261960 solute carrier family 47, member 2 isoform 1 [Homo sapiens] Length = 602 Score = 32.3 bits (72), Expect = 0.13 Identities = 38/128 (29%), Positives = 58/128 (45%), Gaps = 27/128 (21%) Query: 32 LQRVHEPTWA---QQLLQEMKTLFLNTEYLMPFLLNQC--------GSLLYYLTLASTDL 80 L+++H TWA Q LQ+ F +P +L C GS L L L+ DL Sbjct: 269 LKKLHLETWAGWSSQCLQDWGPFF---SLAVPSMLMICVEWWAYEIGSFLMGL-LSVVDL 324 Query: 81 ----------TLAVPICNSLAIIFTLIVGKALG--EDIGGKRAVAGMVLTVIGISLCITS 128 T+ I L+I + VG ALG + + KR+ VL+++GISL + + Sbjct: 325 SAQAVIYEVATVTYMIPLGLSIGVCVRVGMALGAADTVQAKRSAVSGVLSIVGISLVLGT 384 Query: 129 SVSKTQGQ 136 +S + Q Sbjct: 385 LISILKNQ 392 >gi|156627569 solute carrier family 34 (sodium phosphate), member 1 [Homo sapiens] Length = 639 Score = 29.3 bits (64), Expect = 1.1 Identities = 30/100 (30%), Positives = 45/100 (45%), Gaps = 8/100 (8%) Query: 36 HEPTWAQQLLQEMKTLFLNTEYLMPFLLNQCGSLLYYLTLASTDLTLAVPICNSLAIIFT 95 HEP A+ L+E + E + L Q G++L + L T L L V + L+ F Sbjct: 71 HEPLPAKLALEEEQ----KPESRLVPKLRQAGAMLLKVPLMLTFLYLFVCSLDMLSSAFQ 126 Query: 96 LIVGKALGEDIGG----KRAVAGMVLTVIGISLCITSSVS 131 L GK G+ VAG+V+ ++ L +SS S Sbjct: 127 LAGGKVAGDIFKDNAILSNPVAGLVVGILVTVLVQSSSTS 166 >gi|19743869 Fc alpha receptor isoform h [Homo sapiens] Length = 253 Score = 27.7 bits (60), Expect = 3.2 Identities = 20/45 (44%), Positives = 23/45 (51%), Gaps = 9/45 (20%) Query: 8 VLALVLVAAL------WGGTQPLLKRASAGLQRVHEPTWAQQLLQ 46 V LVLVA L W L K ASA V EP+W+QQ+ Q Sbjct: 199 VAGLVLVALLAILVENWHSHTALNKEASAD---VAEPSWSQQMCQ 240 >gi|19743867 Fc alpha receptor isoform g [Homo sapiens] Length = 178 Score = 27.7 bits (60), Expect = 3.2 Identities = 20/45 (44%), Positives = 23/45 (51%), Gaps = 9/45 (20%) Query: 8 VLALVLVAAL------WGGTQPLLKRASAGLQRVHEPTWAQQLLQ 46 V LVLVA L W L K ASA V EP+W+QQ+ Q Sbjct: 124 VAGLVLVALLAILVENWHSHTALNKEASAD---VAEPSWSQQMCQ 165 >gi|19743863 Fc alpha receptor isoform e [Homo sapiens] Length = 179 Score = 27.7 bits (60), Expect = 3.2 Identities = 20/45 (44%), Positives = 23/45 (51%), Gaps = 9/45 (20%) Query: 8 VLALVLVAAL------WGGTQPLLKRASAGLQRVHEPTWAQQLLQ 46 V LVLVA L W L K ASA V EP+W+QQ+ Q Sbjct: 125 VAGLVLVALLAILVENWHSHTALNKEASAD---VAEPSWSQQMCQ 166 >gi|19743861 Fc alpha receptor isoform d [Homo sapiens] Length = 275 Score = 27.7 bits (60), Expect = 3.2 Identities = 20/45 (44%), Positives = 23/45 (51%), Gaps = 9/45 (20%) Query: 8 VLALVLVAAL------WGGTQPLLKRASAGLQRVHEPTWAQQLLQ 46 V LVLVA L W L K ASA V EP+W+QQ+ Q Sbjct: 221 VAGLVLVALLAILVENWHSHTALNKEASAD---VAEPSWSQQMCQ 262 >gi|19743859 Fc alpha receptor isoform c precursor [Homo sapiens] Length = 191 Score = 27.7 bits (60), Expect = 3.2 Identities = 20/45 (44%), Positives = 23/45 (51%), Gaps = 9/45 (20%) Query: 8 VLALVLVAAL------WGGTQPLLKRASAGLQRVHEPTWAQQLLQ 46 V LVLVA L W L K ASA V EP+W+QQ+ Q Sbjct: 137 VAGLVLVALLAILVENWHSHTALNKEASAD---VAEPSWSQQMCQ 178 >gi|19743857 Fc alpha receptor isoform b precursor [Homo sapiens] Length = 265 Score = 27.7 bits (60), Expect = 3.2 Identities = 20/45 (44%), Positives = 23/45 (51%), Gaps = 9/45 (20%) Query: 8 VLALVLVAAL------WGGTQPLLKRASAGLQRVHEPTWAQQLLQ 46 V LVLVA L W L K ASA V EP+W+QQ+ Q Sbjct: 211 VAGLVLVALLAILVENWHSHTALNKEASAD---VAEPSWSQQMCQ 252 >gi|4503673 Fc alpha receptor isoform a precursor [Homo sapiens] Length = 287 Score = 27.7 bits (60), Expect = 3.2 Identities = 20/45 (44%), Positives = 23/45 (51%), Gaps = 9/45 (20%) Query: 8 VLALVLVAAL------WGGTQPLLKRASAGLQRVHEPTWAQQLLQ 46 V LVLVA L W L K ASA V EP+W+QQ+ Q Sbjct: 233 VAGLVLVALLAILVENWHSHTALNKEASAD---VAEPSWSQQMCQ 274 >gi|166197666 putative homeodomain transcription factor 1 [Homo sapiens] Length = 762 Score = 26.6 bits (57), Expect = 7.1 Identities = 17/35 (48%), Positives = 21/35 (60%), Gaps = 1/35 (2%) Query: 43 QLLQEMKTLFLNTEYLMPFLLNQCGSLLYYLTLAS 77 Q+LQ KT FLN Y FL+ + LL+ L LAS Sbjct: 630 QVLQGHKT-FLNDAYNWEFLIWETALLLFLLRLAS 663 >gi|171543850 RUN domain containing 1 [Homo sapiens] Length = 613 Score = 26.6 bits (57), Expect = 7.1 Identities = 14/51 (27%), Positives = 29/51 (56%), Gaps = 1/51 (1%) Query: 21 TQPLLKRASAGLQRVHEPTWA-QQLLQEMKTLFLNTEYLMPFLLNQCGSLL 70 T+ L +R A + ++ P +QL++++KT + E + F+ ++ GS L Sbjct: 242 TEELRQRVDAAVAQIVNPARVKEQLVEQLKTQIRDLEMFINFIQDEVGSPL 292 >gi|239787844 testis expressed 10 isoform 2 [Homo sapiens] Length = 913 Score = 26.2 bits (56), Expect = 9.3 Identities = 11/19 (57%), Positives = 15/19 (78%) Query: 55 TEYLMPFLLNQCGSLLYYL 73 +E L+PFL + C SLLY+L Sbjct: 793 SETLLPFLASCCYSLLYFL 811 >gi|239787838 testis expressed 10 isoform 1 [Homo sapiens] Length = 929 Score = 26.2 bits (56), Expect = 9.3 Identities = 11/19 (57%), Positives = 15/19 (78%) Query: 55 TEYLMPFLLNQCGSLLYYL 73 +E L+PFL + C SLLY+L Sbjct: 790 SETLLPFLASCCYSLLYFL 808 >gi|4505463 contactin associated protein 1 precursor [Homo sapiens] Length = 1384 Score = 26.2 bits (56), Expect = 9.3 Identities = 9/17 (52%), Positives = 13/17 (76%) Query: 18 WGGTQPLLKRASAGLQR 34 WGG+QP ++R + GL R Sbjct: 705 WGGSQPGIQRCACGLDR 721 >gi|157266307 aquaporin 9 [Homo sapiens] Length = 295 Score = 26.2 bits (56), Expect = 9.3 Identities = 17/57 (29%), Positives = 27/57 (47%) Query: 72 YLTLASTDLTLAVPICNSLAIIFTLIVGKALGEDIGGKRAVAGMVLTVIGISLCITS 128 YL+LA+ V L I+F + + LG G + G+++ VI SL + S Sbjct: 155 YLSLANAFADQVVATMILLIIVFAIFDSRNLGAPRGLEPIAIGLLIIVIASSLGLNS 211 Database: hs.faa Posted date: Aug 4, 2009 4:42 PM Number of letters in database: 18,247,518 Number of sequences in database: 37,866 Lambda K H 0.322 0.135 0.387 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 4,252,705 Number of Sequences: 37866 Number of extensions: 148692 Number of successful extensions: 365 Number of sequences better than 10.0: 17 Number of HSP's better than 10.0 without gapping: 7 Number of HSP's successfully gapped in prelim test: 10 Number of HSP's that attempted gapping in prelim test: 358 Number of HSP's gapped (non-prelim): 17 length of query: 140 length of database: 18,247,518 effective HSP length: 92 effective length of query: 48 effective length of database: 14,763,846 effective search space: 708664608 effective search space used: 708664608 T: 11 A: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (22.0 bits) S2: 56 (26.2 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.