BLASTP 2.2.11 [Jun-05-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= gi|92110055 histidine decarboxylase [Homo sapiens] (662 letters) Database: hs.faa 37,866 sequences; 18,247,518 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gi|92110055 histidine decarboxylase [Homo sapiens] 1350 0.0 gi|132814448 dopa decarboxylase (aromatic L-amino acid decarboxy... 536 e-152 gi|4503281 dopa decarboxylase (aromatic L-amino acid decarboxyla... 536 e-152 gi|197383062 glutamate decarboxylase-like 1 [Homo sapiens] 130 4e-30 gi|58331246 glutamate decarboxylase 1 isoform GAD67 [Homo sapiens] 123 5e-28 gi|197276620 glutamate decarboxylase 2 [Homo sapiens] 123 5e-28 gi|4503875 glutamate decarboxylase 2 [Homo sapiens] 123 5e-28 gi|194294551 cysteine sulfinic acid decarboxylase [Homo sapiens] 110 4e-24 gi|190341074 pyridoxal-dependent decarboxylase domain containing... 52 2e-06 gi|105990535 coagulation factor V precursor [Homo sapiens] 31 3.2 gi|75677580 tubulin tyrosine ligase-like family, member 13 [Homo... 30 5.4 gi|148233596 LPS-responsive vesicle trafficking, beach and ancho... 30 7.1 gi|24234747 interleukin enhancer binding factor 2 [Homo sapiens] 30 7.1 >gi|92110055 histidine decarboxylase [Homo sapiens] Length = 662 Score = 1350 bits (3494), Expect = 0.0 Identities = 662/662 (100%), Positives = 662/662 (100%) Query: 1 MMEPEEYRERGREMVDYICQYLSTVRERRVTPDVQPGYLRAQLPESAPEDPDSWDSIFGD 60 MMEPEEYRERGREMVDYICQYLSTVRERRVTPDVQPGYLRAQLPESAPEDPDSWDSIFGD Sbjct: 1 MMEPEEYRERGREMVDYICQYLSTVRERRVTPDVQPGYLRAQLPESAPEDPDSWDSIFGD 60 Query: 61 IERIIMPGVVHWQSPHMHAYYPALTSWPSLLGDMLADAINCLGFTWASSPACTELEMNVM 120 IERIIMPGVVHWQSPHMHAYYPALTSWPSLLGDMLADAINCLGFTWASSPACTELEMNVM Sbjct: 61 IERIIMPGVVHWQSPHMHAYYPALTSWPSLLGDMLADAINCLGFTWASSPACTELEMNVM 120 Query: 121 DWLAKMLGLPEHFLHHHPSSQGGGVLQSTVSESTLIALLAARKNKILEMKTSEPDADESC 180 DWLAKMLGLPEHFLHHHPSSQGGGVLQSTVSESTLIALLAARKNKILEMKTSEPDADESC Sbjct: 121 DWLAKMLGLPEHFLHHHPSSQGGGVLQSTVSESTLIALLAARKNKILEMKTSEPDADESC 180 Query: 181 LNARLVAYASDQAHSSVEKAGLISLVKMKFLPVDDNFSLRGEALQKAIEEDKQRGLVPVF 240 LNARLVAYASDQAHSSVEKAGLISLVKMKFLPVDDNFSLRGEALQKAIEEDKQRGLVPVF Sbjct: 181 LNARLVAYASDQAHSSVEKAGLISLVKMKFLPVDDNFSLRGEALQKAIEEDKQRGLVPVF 240 Query: 241 VCATLGTTGVCAFDCLSELGPICAREGLWLHIDAAYAGTAFLCPEFRGFLKGIEYADSFT 300 VCATLGTTGVCAFDCLSELGPICAREGLWLHIDAAYAGTAFLCPEFRGFLKGIEYADSFT Sbjct: 241 VCATLGTTGVCAFDCLSELGPICAREGLWLHIDAAYAGTAFLCPEFRGFLKGIEYADSFT 300 Query: 301 FNPSKWMMVHFDCTGFWVKDKYKLQQTFSVNPIYLRHANSGVATDFMHWQIPLSRRFRSV 360 FNPSKWMMVHFDCTGFWVKDKYKLQQTFSVNPIYLRHANSGVATDFMHWQIPLSRRFRSV Sbjct: 301 FNPSKWMMVHFDCTGFWVKDKYKLQQTFSVNPIYLRHANSGVATDFMHWQIPLSRRFRSV 360 Query: 361 KLWFVIRSFGVKNLQAHVRHGTEMAKYFESLVRNDPSFEIPAKRHLGLVVFRLKGPNCLT 420 KLWFVIRSFGVKNLQAHVRHGTEMAKYFESLVRNDPSFEIPAKRHLGLVVFRLKGPNCLT Sbjct: 361 KLWFVIRSFGVKNLQAHVRHGTEMAKYFESLVRNDPSFEIPAKRHLGLVVFRLKGPNCLT 420 Query: 421 ENVLKEIAKAGRLFLIPATIQDKLIIRFTVTSQFTTRDDILRDWNLIRDAATLILSQHCT 480 ENVLKEIAKAGRLFLIPATIQDKLIIRFTVTSQFTTRDDILRDWNLIRDAATLILSQHCT Sbjct: 421 ENVLKEIAKAGRLFLIPATIQDKLIIRFTVTSQFTTRDDILRDWNLIRDAATLILSQHCT 480 Query: 481 SQPSPRVGNLISQIRGARAWACGTSLQSVSGAGDDPVQARKIIKQPQRVGAGPMKRENGL 540 SQPSPRVGNLISQIRGARAWACGTSLQSVSGAGDDPVQARKIIKQPQRVGAGPMKRENGL Sbjct: 481 SQPSPRVGNLISQIRGARAWACGTSLQSVSGAGDDPVQARKIIKQPQRVGAGPMKRENGL 540 Query: 541 HLETLLDPVDDCFSEEAPDATKHKLSSFLFSYLSVQTKKKTVRSLSCNSVPVSAQKPLPT 600 HLETLLDPVDDCFSEEAPDATKHKLSSFLFSYLSVQTKKKTVRSLSCNSVPVSAQKPLPT Sbjct: 541 HLETLLDPVDDCFSEEAPDATKHKLSSFLFSYLSVQTKKKTVRSLSCNSVPVSAQKPLPT 600 Query: 601 EASVKNGGSSRVRIFSRFPEDMMMLKKSAFKKLIKFYSVPSFPECSSQCGLQLPCCPLQA 660 EASVKNGGSSRVRIFSRFPEDMMMLKKSAFKKLIKFYSVPSFPECSSQCGLQLPCCPLQA Sbjct: 601 EASVKNGGSSRVRIFSRFPEDMMMLKKSAFKKLIKFYSVPSFPECSSQCGLQLPCCPLQA 660 Query: 661 MV 662 MV Sbjct: 661 MV 662 >gi|132814448 dopa decarboxylase (aromatic L-amino acid decarboxylase) [Homo sapiens] Length = 480 Score = 536 bits (1380), Expect = e-152 Identities = 248/476 (52%), Positives = 346/476 (72%), Gaps = 3/476 (0%) Query: 2 MEPEEYRERGREMVDYICQYLSTVRERRVTPDVQPGYLRAQLPESAPEDPDSWDSIFGDI 61 M E+R RG+EMVDY+ Y+ + R+V PDV+PGYLR +P +AP++PD+++ I D+ Sbjct: 1 MNASEFRRRGKEMVDYVANYMEGIEGRQVYPDVEPGYLRPLIPAAAPQEPDTFEDIINDV 60 Query: 62 ERIIMPGVVHWQSPHMHAYYPALTSWPSLLGDMLADAINCLGFTWASSPACTELEMNVMD 121 E+IIMPGV HW SP+ AY+P +S+P++L DML AI C+GF+WA+SPACTELE +MD Sbjct: 61 EKIIMPGVTHWHSPYFFAYFPTASSYPAMLADMLCGAIGCIGFSWAASPACTELETVMMD 120 Query: 122 WLAKMLGLPEHFLHHHPSSQGGGVLQSTVSESTLIALLAARKNKILEMKTSEPDADESCL 181 WL KML LP+ FL+ + +GGGV+Q + SE+TL+ALLAAR I ++ + P+ ++ + Sbjct: 121 WLGKMLELPKAFLNEK-AGEGGGVIQGSASEATLVALLAARTKVIHRLQAASPELTQAAI 179 Query: 182 NARLVAYASDQAHSSVEKAGLISLVKMKFLPVDDNFSLRGEALQKAIEEDKQRGLVPVFV 241 +LVAY+SDQAHSSVE+AGLI VK+K +P D NF++R ALQ+A+E DK GL+P F+ Sbjct: 180 MEKLVAYSSDQAHSSVERAGLIGGVKLKAIPSDGNFAMRASALQEALERDKAAGLIPFFM 239 Query: 242 CATLGTTGVCAFDCLSELGPICAREGLWLHIDAAYAGTAFLCPEFRGFLKGIEYADSFTF 301 ATLGTT C+FD L E+GPIC +E +WLH+DAAYAG+AF+CPEFR L G+E+ADSF F Sbjct: 240 VATLGTTTCCSFDNLLEVGPICNKEDIWLHVDAAYAGSAFICPEFRHLLNGVEFADSFNF 299 Query: 302 NPSKWMMVHFDCTGFWVKDKYKLQQTFSVNPIYLRHA--NSGVATDFMHWQIPLSRRFRS 359 NP KW++V+FDC+ WVK + L F ++P YL+H+ +SG+ TD+ HWQIPL RRFRS Sbjct: 300 NPHKWLLVNFDCSAMWVKKRTDLTGAFRLDPTYLKHSHQDSGLITDYRHWQIPLGRRFRS 359 Query: 360 VKLWFVIRSFGVKNLQAHVRHGTEMAKYFESLVRNDPSFEIPAKRHLGLVVFRLKGPNCL 419 +K+WFV R +GVK LQA++R +++ FESLVR DP FEI + LGLV FRLKG N + Sbjct: 360 LKMWFVFRMYGVKGLQAYIRKHVQLSHEFESLVRQDPRFEICVEVILGLVCFRLKGSNKV 419 Query: 420 TENVLKEIAKAGRLFLIPATIQDKLIIRFTVTSQFTTRDDILRDWNLIRDAATLIL 475 E +L+ I A ++ L+P ++DK ++RF + S+ + R W I++ A +L Sbjct: 420 NEALLQRINSAKKIHLVPCHLRDKFVLRFAICSRTVESAHVQRAWEHIKELAADVL 475 >gi|4503281 dopa decarboxylase (aromatic L-amino acid decarboxylase) [Homo sapiens] Length = 480 Score = 536 bits (1380), Expect = e-152 Identities = 248/476 (52%), Positives = 346/476 (72%), Gaps = 3/476 (0%) Query: 2 MEPEEYRERGREMVDYICQYLSTVRERRVTPDVQPGYLRAQLPESAPEDPDSWDSIFGDI 61 M E+R RG+EMVDY+ Y+ + R+V PDV+PGYLR +P +AP++PD+++ I D+ Sbjct: 1 MNASEFRRRGKEMVDYVANYMEGIEGRQVYPDVEPGYLRPLIPAAAPQEPDTFEDIINDV 60 Query: 62 ERIIMPGVVHWQSPHMHAYYPALTSWPSLLGDMLADAINCLGFTWASSPACTELEMNVMD 121 E+IIMPGV HW SP+ AY+P +S+P++L DML AI C+GF+WA+SPACTELE +MD Sbjct: 61 EKIIMPGVTHWHSPYFFAYFPTASSYPAMLADMLCGAIGCIGFSWAASPACTELETVMMD 120 Query: 122 WLAKMLGLPEHFLHHHPSSQGGGVLQSTVSESTLIALLAARKNKILEMKTSEPDADESCL 181 WL KML LP+ FL+ + +GGGV+Q + SE+TL+ALLAAR I ++ + P+ ++ + Sbjct: 121 WLGKMLELPKAFLNEK-AGEGGGVIQGSASEATLVALLAARTKVIHRLQAASPELTQAAI 179 Query: 182 NARLVAYASDQAHSSVEKAGLISLVKMKFLPVDDNFSLRGEALQKAIEEDKQRGLVPVFV 241 +LVAY+SDQAHSSVE+AGLI VK+K +P D NF++R ALQ+A+E DK GL+P F+ Sbjct: 180 MEKLVAYSSDQAHSSVERAGLIGGVKLKAIPSDGNFAMRASALQEALERDKAAGLIPFFM 239 Query: 242 CATLGTTGVCAFDCLSELGPICAREGLWLHIDAAYAGTAFLCPEFRGFLKGIEYADSFTF 301 ATLGTT C+FD L E+GPIC +E +WLH+DAAYAG+AF+CPEFR L G+E+ADSF F Sbjct: 240 VATLGTTTCCSFDNLLEVGPICNKEDIWLHVDAAYAGSAFICPEFRHLLNGVEFADSFNF 299 Query: 302 NPSKWMMVHFDCTGFWVKDKYKLQQTFSVNPIYLRHA--NSGVATDFMHWQIPLSRRFRS 359 NP KW++V+FDC+ WVK + L F ++P YL+H+ +SG+ TD+ HWQIPL RRFRS Sbjct: 300 NPHKWLLVNFDCSAMWVKKRTDLTGAFRLDPTYLKHSHQDSGLITDYRHWQIPLGRRFRS 359 Query: 360 VKLWFVIRSFGVKNLQAHVRHGTEMAKYFESLVRNDPSFEIPAKRHLGLVVFRLKGPNCL 419 +K+WFV R +GVK LQA++R +++ FESLVR DP FEI + LGLV FRLKG N + Sbjct: 360 LKMWFVFRMYGVKGLQAYIRKHVQLSHEFESLVRQDPRFEICVEVILGLVCFRLKGSNKV 419 Query: 420 TENVLKEIAKAGRLFLIPATIQDKLIIRFTVTSQFTTRDDILRDWNLIRDAATLIL 475 E +L+ I A ++ L+P ++DK ++RF + S+ + R W I++ A +L Sbjct: 420 NEALLQRINSAKKIHLVPCHLRDKFVLRFAICSRTVESAHVQRAWEHIKELAADVL 475 >gi|197383062 glutamate decarboxylase-like 1 [Homo sapiens] Length = 521 Score = 130 bits (327), Expect = 4e-30 Identities = 93/320 (29%), Positives = 147/320 (45%), Gaps = 25/320 (7%) Query: 89 SLLGDMLADAINCLGFTWASSPACTELEMNVMDWLAKMLGLPEHFLHHHPSSQGGGVLQS 148 SL+ + +A+N +T+ SP +E V+ + + +G E G G+ Sbjct: 129 SLVARFMTEALNPSVYTYEVSPVFLLVEEAVLKKMIEFIGWKE----------GDGIFNP 178 Query: 149 TVSESTLIALLAARKNKILEMKTSEPDADESCLNA--RLVAYASDQAHSSVEKAGL---I 203 S S + A+ AR PD E L+ RL+ + S + H S++KA I Sbjct: 179 GGSVSNMYAMNLARYKYC-------PDIKEKGLSGSPRLILFTSAECHYSMKKAASFLGI 231 Query: 204 SLVKMKFLPVDDNFSLRGEALQKAIEEDKQRGLVPVFVCATLGTTGVCAFDCLSELGPIC 263 + F+ D + E L+K + + ++ G P VCAT GTT + AFD L E+ IC Sbjct: 232 GTENVCFVETDGRGKMIPEELEKQVWQARKEGAAPFLVCATSGTTVLGAFDPLDEIADIC 291 Query: 264 AREGLWLHIDAAYAGTAFLCPEFRGFLKGIEYADSFTFNPSKWMMVHFDCTGFWVKDKYK 323 R LWLH+DA++ G+A + + R L GI ADS +NP K +M C VKDK Sbjct: 292 ERHSLWLHVDASWGGSALMSRKHRKLLHGIHRADSVAWNPHKMLMAGIQCCALLVKDKSD 351 Query: 324 -LQQTFSVNPIYLRHANS--GVATDFMHWQIPLSRRFRSVKLWFVIRSFGVKNLQAHVRH 380 L++ +S YL + V+ D I SRR + K W ++ G L+ V Sbjct: 352 LLKKCYSAKASYLFQQDKFYDVSYDTGDKSIQCSRRPDAFKFWMTWKALGTLGLEERVNR 411 Query: 381 GTEMAKYFESLVRNDPSFEI 400 +++Y ++ F++ Sbjct: 412 ALALSRYLVDEIKKREGFKL 431 >gi|58331246 glutamate decarboxylase 1 isoform GAD67 [Homo sapiens] Length = 594 Score = 123 bits (309), Expect = 5e-28 Identities = 103/368 (27%), Positives = 163/368 (44%), Gaps = 41/368 (11%) Query: 49 EDPDSWDSIFGDIERIIMPGVVHWQSPHMHAYYPALTSWP--SLLGDMLADAINCLGFTW 106 + P+S + I D + GV ++ H + T L G+ L N FT+ Sbjct: 160 DHPESLEQILVDCRDTLKYGV---RTGHPRFFNQLSTGLDIIGLAGEWLTSTANTNMFTY 216 Query: 107 ASSPACTELEMNVMDWLAKMLGLPEHFLHHHPSSQGGGVLQSTVSESTLIALLAARKNKI 166 +P +E + + +++G S G G+ + S + +++AAR Sbjct: 217 EIAPVFVLMEQITLKKMREIVGWS--------SKDGDGIFSPGGAISNMYSIMAARYKYF 268 Query: 167 LEMKTSEPDADESCLNARLVAYASDQAHSSVEKAGL--------ISLVKM----KFLPVD 214 E+KT A +LV + S+Q+H S++KAG + L+K K +P D Sbjct: 269 PEVKTKGMAAVP-----KLVLFTSEQSHYSIKKAGAALGFGTDNVILIKCNERGKIIPAD 323 Query: 215 DNFSLRGEALQKAIEEDKQRGLVPVFVCATLGTTGVCAFDCLSELGPICAREGLWLHIDA 274 + I E KQ+G VP +V AT GTT AFD + E+ IC + LWLH+DA Sbjct: 324 ---------FEAKILEAKQKGYVPFYVNATAGTTVYGAFDPIQEIADICEKYNLWLHVDA 374 Query: 275 AYAGTAFLCPEFRGFLKGIEYADSFTFNPSKWMMVHFDCTGFWVKDKYKLQQTFSVNPIY 334 A+ G + + R L GIE A+S T+NP K M V C+ VK+K LQ + Y Sbjct: 375 AWGGGLLMSRKHRHKLNGIERANSVTWNPHKMMGVLLQCSAILVKEKGILQGCNQMCAGY 434 Query: 335 LRHANS--GVATDFMHWQIPLSRRFRSVKLWFVIRSFGVKNLQAHVRHGTEMAKYFESLV 392 L + V+ D I R K W + ++ G + + E+A+Y + + Sbjct: 435 LFQPDKQYDVSYDTGDKAIQCGRHVDIFKFWLMWKAKGTVGFENQINKCLELAEYLYAKI 494 Query: 393 RNDPSFEI 400 +N FE+ Sbjct: 495 KNREEFEM 502 >gi|197276620 glutamate decarboxylase 2 [Homo sapiens] Length = 585 Score = 123 bits (309), Expect = 5e-28 Identities = 86/316 (27%), Positives = 147/316 (46%), Gaps = 18/316 (5%) Query: 90 LLGDMLADAINCLGFTWASSPACTELEMNVMDWLAKMLGLPEHFLHHHPSSQGGGVLQST 149 L D L N FT+ +P LE + + +++G P G G+ Sbjct: 191 LAADWLTSTANTNMFTYEIAPVFVLLEYVTLKKMREIIGWP--------GGSGDGIFSPG 242 Query: 150 VSESTLIALLAARKNKILEMKTSEPDADESCLNARLVAYASDQAHSSVEKAGL---ISLV 206 + S + A++ AR E+K A RL+A+ S+ +H S++K I Sbjct: 243 GAISNMYAMMIARFKMFPEVKEKGMAA-----LPRLIAFTSEHSHFSLKKGAAALGIGTD 297 Query: 207 KMKFLPVDDNFSLRGEALQKAIEEDKQRGLVPVFVCATLGTTGVCAFDCLSELGPICARE 266 + + D+ + L++ I E KQ+G VP V AT GTT AFD L + IC + Sbjct: 298 SVILIKCDERGKMIPSDLERRILEAKQKGFVPFLVSATAGTTVYGAFDPLLAVADICKKY 357 Query: 267 GLWLHIDAAYAGTAFLCPEFRGFLKGIEYADSFTFNPSKWMMVHFDCTGFWVKDKYKLQQ 326 +W+H+DAA+ G + + + L G+E A+S T+NP K M V C+ V+++ +Q Sbjct: 358 KIWMHVDAAWGGGLLMSRKHKWKLSGVERANSVTWNPHKMMGVPLQCSALLVREEGLMQN 417 Query: 327 TFSVNPIYL--RHANSGVATDFMHWQIPLSRRFRSVKLWFVIRSFGVKNLQAHVRHGTEM 384 ++ YL + + ++ D + R KLW + R+ G +AHV E+ Sbjct: 418 CNQMHASYLFQQDKHYDLSYDTGDKALQCGRHVDVFKLWLMWRAKGTTGFEAHVDKCLEL 477 Query: 385 AKYFESLVRNDPSFEI 400 A+Y ++++N +E+ Sbjct: 478 AEYLYNIIKNREGYEM 493 >gi|4503875 glutamate decarboxylase 2 [Homo sapiens] Length = 585 Score = 123 bits (309), Expect = 5e-28 Identities = 86/316 (27%), Positives = 147/316 (46%), Gaps = 18/316 (5%) Query: 90 LLGDMLADAINCLGFTWASSPACTELEMNVMDWLAKMLGLPEHFLHHHPSSQGGGVLQST 149 L D L N FT+ +P LE + + +++G P G G+ Sbjct: 191 LAADWLTSTANTNMFTYEIAPVFVLLEYVTLKKMREIIGWP--------GGSGDGIFSPG 242 Query: 150 VSESTLIALLAARKNKILEMKTSEPDADESCLNARLVAYASDQAHSSVEKAGL---ISLV 206 + S + A++ AR E+K A RL+A+ S+ +H S++K I Sbjct: 243 GAISNMYAMMIARFKMFPEVKEKGMAA-----LPRLIAFTSEHSHFSLKKGAAALGIGTD 297 Query: 207 KMKFLPVDDNFSLRGEALQKAIEEDKQRGLVPVFVCATLGTTGVCAFDCLSELGPICARE 266 + + D+ + L++ I E KQ+G VP V AT GTT AFD L + IC + Sbjct: 298 SVILIKCDERGKMIPSDLERRILEAKQKGFVPFLVSATAGTTVYGAFDPLLAVADICKKY 357 Query: 267 GLWLHIDAAYAGTAFLCPEFRGFLKGIEYADSFTFNPSKWMMVHFDCTGFWVKDKYKLQQ 326 +W+H+DAA+ G + + + L G+E A+S T+NP K M V C+ V+++ +Q Sbjct: 358 KIWMHVDAAWGGGLLMSRKHKWKLSGVERANSVTWNPHKMMGVPLQCSALLVREEGLMQN 417 Query: 327 TFSVNPIYL--RHANSGVATDFMHWQIPLSRRFRSVKLWFVIRSFGVKNLQAHVRHGTEM 384 ++ YL + + ++ D + R KLW + R+ G +AHV E+ Sbjct: 418 CNQMHASYLFQQDKHYDLSYDTGDKALQCGRHVDVFKLWLMWRAKGTTGFEAHVDKCLEL 477 Query: 385 AKYFESLVRNDPSFEI 400 A+Y ++++N +E+ Sbjct: 478 AEYLYNIIKNREGYEM 493 >gi|194294551 cysteine sulfinic acid decarboxylase [Homo sapiens] Length = 520 Score = 110 bits (275), Expect = 4e-24 Identities = 83/320 (25%), Positives = 142/320 (44%), Gaps = 25/320 (7%) Query: 89 SLLGDMLADAINCLGFTWASSPACTELEMNVMDWLAKMLGLPEHFLHHHPSSQGGGVLQS 148 +L G ++ +++N +T+ +P +E V+ L ++G S G G+ Sbjct: 128 ALAGRIITESLNTSQYTYEIAPVFVLMEEEVLRKLRALVGW----------SSGDGIFCP 177 Query: 149 TVSESTLIALLAARKNKILEMKTSEPDADESCLNAR--LVAYASDQAHSSVEKAGL---I 203 S S + A+ AR + PD + L L + S + H S++K + Sbjct: 178 GGSISNMYAVNLARYQRY-------PDCKQRGLRTLPPLALFTSKECHYSIQKGAAFLGL 230 Query: 204 SLVKMKFLPVDDNFSLRGEALQKAIEEDKQRGLVPVFVCATLGTTGVCAFDCLSELGPIC 263 ++ + D+ + E L++ I + G VP V AT GTT + AFD L + +C Sbjct: 231 GTDSVRVVKADERGKMVPEDLERQIGMAEAEGAVPFLVSATSGTTVLGAFDPLEAIADVC 290 Query: 264 AREGLWLHIDAAYAGTAFLCPEFRGFLKGIEYADSFTFNPSKWMMVHFDCTGFWVKDKYK 323 R GLWLH+DAA+ G+ L R L GI+ ADS +NP K + C+ ++D Sbjct: 291 QRHGLWLHVDAAWGGSVLLSQTHRHLLDGIQRADSVAWNPHKLLAAGLQCSALLLQDTSN 350 Query: 324 -LQQTFSVNPIYLRHANS--GVATDFMHWQIPLSRRFRSVKLWFVIRSFGVKNLQAHVRH 380 L++ YL + VA D + RR +KLW + ++ G + L+ + Sbjct: 351 LLKRCHGSQASYLFQQDKFYDVALDTGDKVVQCGRRVDCLKLWLMWKAQGDQGLERRIDQ 410 Query: 381 GTEMAKYFESLVRNDPSFEI 400 +A+Y ++ FE+ Sbjct: 411 AFVLARYLVEEMKKREGFEL 430 >gi|190341074 pyridoxal-dependent decarboxylase domain containing 1 [Homo sapiens] Length = 788 Score = 52.0 bits (123), Expect = 2e-06 Identities = 42/191 (21%), Positives = 77/191 (40%), Gaps = 20/191 (10%) Query: 224 LQKAIEEDKQRGLVPVFVCATLGTTGVCAFDCLSELGPICAREGLWLHIDAAYAGTAFLC 283 L+K I++D +RG +P+ + A GT V D + L +C + G+WLH++ T L Sbjct: 221 LEKLIKDDIERGRLPLLLVANAGTAAVGHTDKIGRLKELCEQYGIWLHVEGVNLATLALG 280 Query: 284 PEFRGFLKGIEYADSFTFNPSKWMMVHFDCTGFWVKDKYKLQQTFSVNPIYLRHANSGVA 343 L + DS T P W+ G L + + S Sbjct: 281 YVSSSVLAAAK-CDSMTMTPGPWL-------GLPAVPAVTLYKHDDPALTLVAGLTSNKP 332 Query: 344 TDFMHWQIPLSRRFRSVKLWFVIRSFGVKNLQAHVRHGTEMAKYFESLVRNDPSFEIPAK 403 TD + R++ LW ++ G+ ++H ++++ + ++ +I + Sbjct: 333 TD----------KLRALPLWLSLQYLGLDGFVERIKHACQLSQRLQESLKKVNYIKILVE 382 Query: 404 RHLG--LVVFR 412 L +VVFR Sbjct: 383 DELSSPVVVFR 393 >gi|105990535 coagulation factor V precursor [Homo sapiens] Length = 2224 Score = 31.2 bits (69), Expect = 3.2 Identities = 23/79 (29%), Positives = 38/79 (48%), Gaps = 6/79 (7%) Query: 556 EAPDATKHKLSSFLFSYLSVQTKKKTVRSLSCNSVPVSAQKPLPTEASVKNGGSSRVRIF 615 E A KH+ FS++ + K R LS ++ S +P S G SR+R + Sbjct: 871 ERDQAAKHR-----FSWMKLLAHK-VGRHLSQDTGSPSGMRPWEDLPSQDTGSPSRMRPW 924 Query: 616 SRFPEDMMMLKKSAFKKLI 634 P D+++LK+S K++ Sbjct: 925 KDPPSDLLLLKQSNSSKIL 943 >gi|75677580 tubulin tyrosine ligase-like family, member 13 [Homo sapiens] Length = 459 Score = 30.4 bits (67), Expect = 5.4 Identities = 41/178 (23%), Positives = 63/178 (35%), Gaps = 38/178 (21%) Query: 7 YRERGREMVDYICQYLST----------VRERRVTPDVQPGYLRAQLPESAPEDPDSWDS 56 Y E +D +C +L+ VR+ V + L L E + + W Sbjct: 275 YMEPSHNNLDNVCMHLTNYAINKHNENFVRDGAVGSKRKLSTLNIWLQEHSYNPGELW-- 332 Query: 57 IFGDIERIIMPGVVHWQSPHMHAYYPALTSWPSLLGDMLADAINCLGFTWASSPACTELE 116 GDIE II+ ++ S H Y T +P L LGF L+ Sbjct: 333 --GDIEDIIIKTIISAHSVLRHNY---RTCFPQYLNGGTCACFEILGFD-------ILLD 380 Query: 117 MNVMDWLAKMLGLPEHFLHHHPSSQGGGVLQSTVSES------TLIALLAARKNKILE 168 + WL + ++H PS L V ++ TL+ L K K++E Sbjct: 381 HKLKPWLLE--------VNHSPSFTTDSCLDQEVKDALLCDAMTLVNLRGCDKRKVME 430 >gi|148233596 LPS-responsive vesicle trafficking, beach and anchor containing [Homo sapiens] Length = 2863 Score = 30.0 bits (66), Expect = 7.1 Identities = 14/47 (29%), Positives = 19/47 (40%) Query: 263 CAREGLWLHIDAAYAGTAFLCPEFRGFLKGIEYADSFTFNPSKWMMV 309 C R L A + G + + KG ++ F F P KW MV Sbjct: 256 CFRTSKGLGYSAHFVGGCLIVTSIKSKGKGFQHCVKFDFKPQKWYMV 302 >gi|24234747 interleukin enhancer binding factor 2 [Homo sapiens] Length = 390 Score = 30.0 bits (66), Expect = 7.1 Identities = 21/63 (33%), Positives = 32/63 (50%), Gaps = 1/63 (1%) Query: 173 EPDADESCLNARLVAYASDQAHSSVEKAGLISLVKMKFLPVDDNFSLRGEALQKAIEEDK 232 +P DE+ + L+ D A +S E+A ++SLV K V DN + + IEE + Sbjct: 45 KPAPDETSFSEALLKRNQDLAPNSAEQASILSLV-TKINNVIDNLIVAPGTFEVQIEEVR 103 Query: 233 QRG 235 Q G Sbjct: 104 QVG 106 Database: hs.faa Posted date: Aug 4, 2009 4:42 PM Number of letters in database: 18,247,518 Number of sequences in database: 37,866 Lambda K H 0.322 0.135 0.419 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 25,804,996 Number of Sequences: 37866 Number of extensions: 1159755 Number of successful extensions: 2427 Number of sequences better than 10.0: 13 Number of HSP's better than 10.0 without gapping: 10 Number of HSP's successfully gapped in prelim test: 3 Number of HSP's that attempted gapping in prelim test: 2401 Number of HSP's gapped (non-prelim): 16 length of query: 662 length of database: 18,247,518 effective HSP length: 109 effective length of query: 553 effective length of database: 14,120,124 effective search space: 7808428572 effective search space used: 7808428572 T: 11 A: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.9 bits) S2: 65 (29.6 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.