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Search of human proteins with 8923380
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|8923380 O-sialoglycoprotein endopeptidase [Homo sapiens]
(335 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|8923380 O-sialoglycoprotein endopeptidase [Homo sapiens] 677 0.0
gi|116812636 O-sialoglycoprotein endopeptidase-like 1 [Homo sapi... 108 5e-24
gi|157785645 SPEG complex locus [Homo sapiens] 33 0.27
gi|54607108 zinc finger, MIZ-type containing 2 isoform 1 [Homo s... 31 1.4
gi|54607110 zinc finger, MIZ-type containing 2 isoform 2 [Homo s... 31 1.4
gi|239756667 PREDICTED: hypothetical protein [Homo sapiens] 30 2.3
gi|239751165 PREDICTED: hypothetical protein XP_002347739 [Homo ... 30 2.3
gi|239745650 PREDICTED: hypothetical protein XP_002344167 [Homo ... 30 2.3
>gi|8923380 O-sialoglycoprotein endopeptidase [Homo sapiens]
Length = 335
Score = 677 bits (1747), Expect = 0.0
Identities = 335/335 (100%), Positives = 335/335 (100%)
Query: 1 MPAVLGFEGSANKIGVGVVRDGKVLANPRRTYVTPPGTGFLPGDTARHHRAVILDLLQEA 60
MPAVLGFEGSANKIGVGVVRDGKVLANPRRTYVTPPGTGFLPGDTARHHRAVILDLLQEA
Sbjct: 1 MPAVLGFEGSANKIGVGVVRDGKVLANPRRTYVTPPGTGFLPGDTARHHRAVILDLLQEA 60
Query: 61 LTESGLTSQDIDCIAYTKGPGMGAPLVSVAVVARTVAQLWNKPLVGVNHCIGHIEMGRLI 120
LTESGLTSQDIDCIAYTKGPGMGAPLVSVAVVARTVAQLWNKPLVGVNHCIGHIEMGRLI
Sbjct: 61 LTESGLTSQDIDCIAYTKGPGMGAPLVSVAVVARTVAQLWNKPLVGVNHCIGHIEMGRLI 120
Query: 121 TGATSPTVLYVSGGNTQVIAYSEHRYRIFGETIDIAVGNCLDRFARVLKISNDPSPGYNI 180
TGATSPTVLYVSGGNTQVIAYSEHRYRIFGETIDIAVGNCLDRFARVLKISNDPSPGYNI
Sbjct: 121 TGATSPTVLYVSGGNTQVIAYSEHRYRIFGETIDIAVGNCLDRFARVLKISNDPSPGYNI 180
Query: 181 EQMAKRGKKLVELPYTVKGMDVSFSGILSFIEDVAHRMLATGECTPEDLCFSLQETVFAM 240
EQMAKRGKKLVELPYTVKGMDVSFSGILSFIEDVAHRMLATGECTPEDLCFSLQETVFAM
Sbjct: 181 EQMAKRGKKLVELPYTVKGMDVSFSGILSFIEDVAHRMLATGECTPEDLCFSLQETVFAM 240
Query: 241 LVEITERAMAHCGSQEALIVGGVGCNVRLQEMMATMCQERGARLFATDERFCIDNGAMIA 300
LVEITERAMAHCGSQEALIVGGVGCNVRLQEMMATMCQERGARLFATDERFCIDNGAMIA
Sbjct: 241 LVEITERAMAHCGSQEALIVGGVGCNVRLQEMMATMCQERGARLFATDERFCIDNGAMIA 300
Query: 301 QAGWEMFRAGHRTPLSDSGVTQRYRTDEVEVTWRD 335
QAGWEMFRAGHRTPLSDSGVTQRYRTDEVEVTWRD
Sbjct: 301 QAGWEMFRAGHRTPLSDSGVTQRYRTDEVEVTWRD 335
>gi|116812636 O-sialoglycoprotein endopeptidase-like 1 [Homo
sapiens]
Length = 414
Score = 108 bits (271), Expect = 5e-24
Identities = 99/337 (29%), Positives = 155/337 (45%), Gaps = 31/337 (9%)
Query: 4 VLGFEGSANKIGVGVVRD-GKVLANP--RRTYVTPPGTGFLPGDTARHHRAVILDLLQEA 60
VLG E S + VV + G VL +T V G +P + HR I ++QEA
Sbjct: 39 VLGIETSCDDTAAAVVDETGNVLGEAIHSQTEVHLKTGGIVPPAAQQLHRENIQRIVQEA 98
Query: 61 LTESGLTSQDIDCIAYTKGPGMGAPL-VSVAVVARTVAQLWNKPLVGVNHCIGHIEMGRL 119
L+ SG++ D+ IA T PG+ L V ++ + V QL KP + ++H H RL
Sbjct: 99 LSASGVSPSDLSAIATTIKPGLALSLGVGLSFSLQLVGQL-KKPFIPIHHMEAHALTIRL 157
Query: 120 ITGATSP-TVLYVSGGNTQV-IAYSEHRYRIFGETIDIAVGNCLDRFARVLKISNDP--- 174
P VL +SGG+ + + + + G+++DIA G+ LD+ AR L + P
Sbjct: 158 TNKVEFPFLVLLISGGHCLLALVQGVSDFLLLGKSLDIAPGDMLDKVARRLSLIKHPECS 217
Query: 175 --SPGYNIEQMAKRGKKL---VELP-YTVKGMDVSFSGILSFIEDVAHRM-----LATGE 223
S G IE +AK+G + ++ P + K D SF+G+ + + + + G+
Sbjct: 218 TMSGGKAIEHLAKQGNRFHFDIKPPLHHAKNCDFSFTGLQHVTDKIIMKKEKEEGIEKGQ 277
Query: 224 --CTPEDLCFSLQETVFAMLVEITERAMAHCGSQEAL--------IVGGVGCNVRLQEMM 273
+ D+ ++Q T+ LV+ T RA+ C ++ L GGV N ++ +
Sbjct: 278 ILSSAADIAATVQHTMACHLVKRTHRAILFCKQRDLLPQNNAVLVASGGVASNFYIRRAL 337
Query: 274 ATMCQERGARLFATDERFCIDNGAMIAQAGWEMFRAG 310
+ L R C DNG MIA G E RAG
Sbjct: 338 EILTNATQCTLLCPPPRLCTDNGIMIAWNGIERLRAG 374
>gi|157785645 SPEG complex locus [Homo sapiens]
Length = 3267
Score = 33.5 bits (75), Expect = 0.27
Identities = 45/186 (24%), Positives = 72/186 (38%), Gaps = 48/186 (25%)
Query: 49 HRAVILDLLQEALTESGLTSQDIDCIAYTKGPGMGAPLVSVAVVARTVAQLWNKPLV--- 105
+++VI + L +A + L D+ GP GAP V VAV R V WN P
Sbjct: 1258 YKSVIANKLGKAACYAHLYVTDV-----VPGPPDGAPQV-VAVTGRMVTLTWNPPRSLDM 1311
Query: 106 -----GVNHCIGHIEMGR-----LITGATSPTVLYVSGGNTQVIAYSEHRYRIFGETIDI 155
+ + + H +G L+TG P + + G + + +H +R+ T+
Sbjct: 1312 AIDPDSLTYTVQHQVLGSDQWTALVTGLREPG--WAATGLRKGV---QHIFRVLSTTV-- 1364
Query: 156 AVGNCLDRFARVLKISNDPSPGYNIEQMAKRGKKLVELP---------YTVKGMDVSFSG 206
K S+ PSP Q+ + G L E P Y V+G S +
Sbjct: 1365 -------------KSSSKPSPPSEPVQLLEHGPTLEEAPAMLDKPDIVYVVEGQPASVTV 1411
Query: 207 ILSFIE 212
+ +E
Sbjct: 1412 TFNHVE 1417
>gi|54607108 zinc finger, MIZ-type containing 2 isoform 1 [Homo
sapiens]
Length = 920
Score = 31.2 bits (69), Expect = 1.4
Identities = 21/72 (29%), Positives = 29/72 (40%), Gaps = 1/72 (1%)
Query: 15 GVGVVRDGKVLANPRRTYVTPPGTGFLPGDTARHHRAVILDLL-QEALTESGLTSQDIDC 73
GVG +VL NP +P G+ +PG L Q+A E G +
Sbjct: 47 GVGNATQSQVLGNPMGPAGSPSGSSMMPGVAGGSSALTSPQCLGQQAFAEGGANKGYVQQ 106
Query: 74 IAYTKGPGMGAP 85
Y++G GAP
Sbjct: 107 GVYSRGGYPGAP 118
>gi|54607110 zinc finger, MIZ-type containing 2 isoform 2 [Homo
sapiens]
Length = 894
Score = 31.2 bits (69), Expect = 1.4
Identities = 21/72 (29%), Positives = 29/72 (40%), Gaps = 1/72 (1%)
Query: 15 GVGVVRDGKVLANPRRTYVTPPGTGFLPGDTARHHRAVILDLL-QEALTESGLTSQDIDC 73
GVG +VL NP +P G+ +PG L Q+A E G +
Sbjct: 47 GVGNATQSQVLGNPMGPAGSPSGSSMMPGVAGGSSALTSPQCLGQQAFAEGGANKGYVQQ 106
Query: 74 IAYTKGPGMGAP 85
Y++G GAP
Sbjct: 107 GVYSRGGYPGAP 118
>gi|239756667 PREDICTED: hypothetical protein [Homo sapiens]
Length = 484
Score = 30.4 bits (67), Expect = 2.3
Identities = 28/95 (29%), Positives = 41/95 (43%), Gaps = 14/95 (14%)
Query: 35 PPGTGFLPGDTAR-HHRAVILDLLQEALTESGLTSQDIDCIAYTKGPGMGAPLVSVAVVA 93
PP G GD R H + V+ LLQ ++GL SQD G +G P S ++
Sbjct: 205 PPTHGRCSGDEVRLHEQDVLAQLLQTRREQAGLLSQD-------TGRPLGMPPPSNPHLS 257
Query: 94 RTVAQLWNKPLVGVNHCIGHIEMGRLITGATSPTV 128
R K V N C H ++ + A +P++
Sbjct: 258 RL------KVPVVYNACRDHSQVVPVAVAAVTPSM 286
>gi|239751165 PREDICTED: hypothetical protein XP_002347739 [Homo
sapiens]
Length = 484
Score = 30.4 bits (67), Expect = 2.3
Identities = 28/95 (29%), Positives = 41/95 (43%), Gaps = 14/95 (14%)
Query: 35 PPGTGFLPGDTAR-HHRAVILDLLQEALTESGLTSQDIDCIAYTKGPGMGAPLVSVAVVA 93
PP G GD R H + V+ LLQ ++GL SQD G +G P S ++
Sbjct: 205 PPTHGRCSGDEVRLHEQDVLAQLLQTRREQAGLLSQD-------TGRPLGMPPPSNPHLS 257
Query: 94 RTVAQLWNKPLVGVNHCIGHIEMGRLITGATSPTV 128
R K V N C H ++ + A +P++
Sbjct: 258 RL------KVPVVYNACRDHSQVVPVAVAAVTPSM 286
>gi|239745650 PREDICTED: hypothetical protein XP_002344167 [Homo
sapiens]
Length = 484
Score = 30.4 bits (67), Expect = 2.3
Identities = 28/95 (29%), Positives = 41/95 (43%), Gaps = 14/95 (14%)
Query: 35 PPGTGFLPGDTAR-HHRAVILDLLQEALTESGLTSQDIDCIAYTKGPGMGAPLVSVAVVA 93
PP G GD R H + V+ LLQ ++GL SQD G +G P S ++
Sbjct: 205 PPTHGRCSGDEVRLHEQDVLAQLLQTRREQAGLLSQD-------TGRPLGMPPPSNPHLS 257
Query: 94 RTVAQLWNKPLVGVNHCIGHIEMGRLITGATSPTV 128
R K V N C H ++ + A +P++
Sbjct: 258 RL------KVPVVYNACRDHSQVVPVAVAAVTPSM 286
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.321 0.137 0.413
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 12,684,848
Number of Sequences: 37866
Number of extensions: 549281
Number of successful extensions: 938
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 6
Number of HSP's that attempted gapping in prelim test: 934
Number of HSP's gapped (non-prelim): 8
length of query: 335
length of database: 18,247,518
effective HSP length: 103
effective length of query: 232
effective length of database: 14,347,320
effective search space: 3328578240
effective search space used: 3328578240
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 62 (28.5 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.