Search of human proteins with 8922116

Search of human proteins with 8922116

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|8922116 hypothetical protein LOC11094 isoform a [Homo
sapiens]
         (172 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|8922116 hypothetical protein LOC11094 isoform a [Homo sapiens]     348   1e-96
gi|209413763 hypothetical protein LOC11094 isoform b [Homo sapiens]   238   1e-63
gi|27734719 solute carrier family 19, member 2 [Homo sapiens]          31   0.46 
gi|183227675 transmembrane protein 72 [Homo sapiens]                   29   2.3  
gi|221316741 N-acetyltransferase 10 isoform b [Homo sapiens]           28   3.9  
gi|221316723 N-acetyltransferase 10 isoform a [Homo sapiens]           28   3.9  
gi|29789379 sphingomyelin synthase 1 [Homo sapiens]                    28   3.9  
gi|157389023 progestin and adipoQ receptor family member V [Homo...    28   5.1  
gi|157389021 progestin and adipoQ receptor family member V [Homo...    28   5.1  

>gi|8922116 hypothetical protein LOC11094 isoform a [Homo sapiens]
          Length = 172

 Score =  348 bits (894), Expect = 1e-96
 Identities = 172/172 (100%), Positives = 172/172 (100%)

Query: 1   MSSSGGAPGASASSAPPAQEEGMTWWYRWLCRLSGVLGAVSCAISGLFNCITIHPLNIAA 60
           MSSSGGAPGASASSAPPAQEEGMTWWYRWLCRLSGVLGAVSCAISGLFNCITIHPLNIAA
Sbjct: 1   MSSSGGAPGASASSAPPAQEEGMTWWYRWLCRLSGVLGAVSCAISGLFNCITIHPLNIAA 60

Query: 61  GVWMIMNAFILLLCEAPFCCQFIEFANTVAEKVDRLRSWQKAVFYCGMAVVPIVISLTLT 120
           GVWMIMNAFILLLCEAPFCCQFIEFANTVAEKVDRLRSWQKAVFYCGMAVVPIVISLTLT
Sbjct: 61  GVWMIMNAFILLLCEAPFCCQFIEFANTVAEKVDRLRSWQKAVFYCGMAVVPIVISLTLT 120

Query: 121 TLLGNAIAFATGVLYGLSALGKKGDAISYARIQQQRQQADEEKLAETLEGEL 172
           TLLGNAIAFATGVLYGLSALGKKGDAISYARIQQQRQQADEEKLAETLEGEL
Sbjct: 121 TLLGNAIAFATGVLYGLSALGKKGDAISYARIQQQRQQADEEKLAETLEGEL 172


>gi|209413763 hypothetical protein LOC11094 isoform b [Homo sapiens]
          Length = 130

 Score =  238 bits (608), Expect = 1e-63
 Identities = 129/172 (75%), Positives = 130/172 (75%), Gaps = 42/172 (24%)

Query: 1   MSSSGGAPGASASSAPPAQEEGMTWWYRWLCRLSGVLGAVSCAISGLFNCITIHPLNIAA 60
           MSSSGGAPGASASSAPPAQEEGMTWWYRWLCRLSGVLGAVSCAISGLFNCITIHPLNIAA
Sbjct: 1   MSSSGGAPGASASSAPPAQEEGMTWWYRWLCRLSGVLGAVSCAISGLFNCITIHPLNIAA 60

Query: 61  GVWMIMNAFILLLCEAPFCCQFIEFANTVAEKVDRLRSWQKAVFYCGMAVVPIVISLTLT 120
           GVWM+                                          MAVVPIVISLTLT
Sbjct: 61  GVWMM------------------------------------------MAVVPIVISLTLT 78

Query: 121 TLLGNAIAFATGVLYGLSALGKKGDAISYARIQQQRQQADEEKLAETLEGEL 172
           TLLGNAIAFATGVLYGLSALGKKGDAISYARIQQQRQQADEEKLAETLEGEL
Sbjct: 79  TLLGNAIAFATGVLYGLSALGKKGDAISYARIQQQRQQADEEKLAETLEGEL 130


>gi|27734719 solute carrier family 19, member 2 [Homo sapiens]
          Length = 497

 Score = 31.2 bits (69), Expect = 0.46
 Identities = 31/138 (22%), Positives = 57/138 (41%), Gaps = 23/138 (16%)

Query: 25  WWYRWLCRLSGVLGAVSCAISGLFNCITIHPLNIAAGVWMIMNAFILLLCEAPFCCQFIE 84
           W Y +L  L  V  A         + +   P+ +  G+ +I+  F+LL  +     QF+E
Sbjct: 77  WTYSYLVLLFPVFLAT--------DYLRYKPVVLLQGLSLIVTWFMLLYAQGLLAIQFLE 128

Query: 85  FANTVAE-----------KVDRLRSWQKAVFYCGMAVVPIVISLTLTTLLGNAIAFATG- 132
           F   +A             V  L  +QK   YC  A    ++  T+ ++LG  +    G 
Sbjct: 129 FFYGIATATEIAYYSYIYSVVDLGMYQKVTSYCRSAT---LVGFTVGSVLGQILVSVAGW 185

Query: 133 VLYGLSALGKKGDAISYA 150
            L+ L+ +     ++++A
Sbjct: 186 SLFSLNVISLTCVSVAFA 203


>gi|183227675 transmembrane protein 72 [Homo sapiens]
          Length = 275

 Score = 28.9 bits (63), Expect = 2.3
 Identities = 33/127 (25%), Positives = 51/127 (40%), Gaps = 9/127 (7%)

Query: 29  WLCRLSGVLGAV-------SCAISGLFNCITIHPLNIAAGVWMIMNA-FILLLCEAPFCC 80
           + CRL G+  A           + G F  +  + L   A V +   A F+  L    F C
Sbjct: 12  YTCRLLGITTAAVLIGVGTETFLQGQFKSLAFYLLFTGAAVSICEGAYFVAQLLAICFQC 71

Query: 81  QFIEFANTVAEKVDRLRSWQKAVFYCGMAVVPIVIS-LTLTTLLGNAIAFATGVLYGLSA 139
           Q    A+ V EK   L  +QK + Y  ++V   +   L     +  ++   TG+ Y L +
Sbjct: 72  QPGSLADRVREKAHWLGCFQKFLAYLLLSVACFLHPVLVWHVTIPGSMLIITGLAYFLLS 131

Query: 140 LGKKGDA 146
             KK  A
Sbjct: 132 KRKKRKA 138


>gi|221316741 N-acetyltransferase 10 isoform b [Homo sapiens]
          Length = 953

 Score = 28.1 bits (61), Expect = 3.9
 Identities = 17/63 (26%), Positives = 33/63 (52%), Gaps = 6/63 (9%)

Query: 109 AVVPIVISLTLTTLLGNAIAFATGVLYGLSALGKKGDAISYARIQQQRQQADEEKLAETL 168
           A +P+ +   + +LLG  + F    + G    G+   ++S   IQQ RQQ+ + +++ T 
Sbjct: 319 AAIPLPL---VKSLLGPYLVFMASTINGYEGTGR---SLSLKLIQQLRQQSAQSQVSTTA 372

Query: 169 EGE 171
           E +
Sbjct: 373 ENK 375


>gi|221316723 N-acetyltransferase 10 isoform a [Homo sapiens]
          Length = 1025

 Score = 28.1 bits (61), Expect = 3.9
 Identities = 17/63 (26%), Positives = 33/63 (52%), Gaps = 6/63 (9%)

Query: 109 AVVPIVISLTLTTLLGNAIAFATGVLYGLSALGKKGDAISYARIQQQRQQADEEKLAETL 168
           A +P+ +   + +LLG  + F    + G    G+   ++S   IQQ RQQ+ + +++ T 
Sbjct: 391 AAIPLPL---VKSLLGPYLVFMASTINGYEGTGR---SLSLKLIQQLRQQSAQSQVSTTA 444

Query: 169 EGE 171
           E +
Sbjct: 445 ENK 447


>gi|29789379 sphingomyelin synthase 1 [Homo sapiens]
          Length = 413

 Score = 28.1 bits (61), Expect = 3.9
 Identities = 8/14 (57%), Positives = 10/14 (71%)

Query: 25  WWYRWLCRLSGVLG 38
           WWY W+C L  V+G
Sbjct: 305 WWYHWICWLLSVVG 318


>gi|157389023 progestin and adipoQ receptor family member V [Homo
           sapiens]
          Length = 330

 Score = 27.7 bits (60), Expect = 5.1
 Identities = 18/55 (32%), Positives = 26/55 (47%), Gaps = 2/55 (3%)

Query: 98  SWQKAVFYCGMAVVPIVISL--TLTTLLGNAIAFATGVLYGLSALGKKGDAISYA 150
           SW   V+ C   V P+V S   T +++  NA      + YG   L   G AI+Y+
Sbjct: 81  SWPMLVYMCTSCVYPLVSSCAHTFSSMSKNARHICYFLDYGAVNLFSLGSAIAYS 135


>gi|157389021 progestin and adipoQ receptor family member V [Homo
           sapiens]
          Length = 330

 Score = 27.7 bits (60), Expect = 5.1
 Identities = 18/55 (32%), Positives = 26/55 (47%), Gaps = 2/55 (3%)

Query: 98  SWQKAVFYCGMAVVPIVISL--TLTTLLGNAIAFATGVLYGLSALGKKGDAISYA 150
           SW   V+ C   V P+V S   T +++  NA      + YG   L   G AI+Y+
Sbjct: 81  SWPMLVYMCTSCVYPLVSSCAHTFSSMSKNARHICYFLDYGAVNLFSLGSAIAYS 135


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.323    0.135    0.423 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 6,443,134
Number of Sequences: 37866
Number of extensions: 247439
Number of successful extensions: 865
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 6
Number of HSP's that attempted gapping in prelim test: 859
Number of HSP's gapped (non-prelim): 10
length of query: 172
length of database: 18,247,518
effective HSP length: 95
effective length of query: 77
effective length of database: 14,650,248
effective search space: 1128069096
effective search space used: 1128069096
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 58 (26.9 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.