Search of human proteins with 88853865

Search of human proteins with 88853865

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|88853865 isoamyl acetate-hydrolyzing esterase 1 homolog
[Homo sapiens]
         (248 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|88853865 isoamyl acetate-hydrolyzing esterase 1 homolog [Homo...   511   e-145
gi|134031945 SCO-spondin [Homo sapiens]                                30   2.0  
gi|239755591 PREDICTED: similar to Putative ubiquitin-like prote...    29   3.3  
gi|5453722 lysophospholipase 1 [Homo sapiens]                          29   3.3  
gi|46249351 homer 2 isoform 2 [Homo sapiens]                           29   4.3  
gi|46249349 homer 2 isoform 1 [Homo sapiens]                           29   4.3  
gi|9966764 lysophospholipase II [Homo sapiens]                         28   5.7  
gi|5453557 ariadne homolog 2 [Homo sapiens]                            28   5.7  
gi|126032338 ryanodine receptor 3 [Homo sapiens]                       28   7.4  
gi|34485720 echinoderm microtubule associated protein like 5 [Ho...    28   9.7  

>gi|88853865 isoamyl acetate-hydrolyzing esterase 1 homolog [Homo
           sapiens]
          Length = 248

 Score =  511 bits (1317), Expect = e-145
 Identities = 248/248 (100%), Positives = 248/248 (100%)

Query: 1   MALCEAAGCGSALLWPRLLLFGDSITQFSFQQGGWGASLADRLVRKCDVLNRGFSGYNTR 60
           MALCEAAGCGSALLWPRLLLFGDSITQFSFQQGGWGASLADRLVRKCDVLNRGFSGYNTR
Sbjct: 1   MALCEAAGCGSALLWPRLLLFGDSITQFSFQQGGWGASLADRLVRKCDVLNRGFSGYNTR 60

Query: 61  WAKIILPRLIRKGNSLDIPVAVTIFFGANDSALKDENPKQHIPLEEYAANLKSMVQYLKS 120
           WAKIILPRLIRKGNSLDIPVAVTIFFGANDSALKDENPKQHIPLEEYAANLKSMVQYLKS
Sbjct: 61  WAKIILPRLIRKGNSLDIPVAVTIFFGANDSALKDENPKQHIPLEEYAANLKSMVQYLKS 120

Query: 121 VDIPENRVILITPTPLCETAWEEQCIIQGCKLNRLNSVVGEYANACLQVAQDCGTDVLDL 180
           VDIPENRVILITPTPLCETAWEEQCIIQGCKLNRLNSVVGEYANACLQVAQDCGTDVLDL
Sbjct: 121 VDIPENRVILITPTPLCETAWEEQCIIQGCKLNRLNSVVGEYANACLQVAQDCGTDVLDL 180

Query: 181 WTLMQDSQDFSSYLSDGLHLSPKGNEFLFSHLWPLIEKKVSSLPLLLPYWRDVAEAKPEL 240
           WTLMQDSQDFSSYLSDGLHLSPKGNEFLFSHLWPLIEKKVSSLPLLLPYWRDVAEAKPEL
Sbjct: 181 WTLMQDSQDFSSYLSDGLHLSPKGNEFLFSHLWPLIEKKVSSLPLLLPYWRDVAEAKPEL 240

Query: 241 SLLGDGDH 248
           SLLGDGDH
Sbjct: 241 SLLGDGDH 248


>gi|134031945 SCO-spondin [Homo sapiens]
          Length = 5147

 Score = 30.0 bits (66), Expect = 2.0
 Identities = 13/21 (61%), Positives = 15/21 (71%), Gaps = 2/21 (9%)

Query: 132  TPTPLCE--TAWEEQCIIQGC 150
            TPTPLC    A EE C++QGC
Sbjct: 3229 TPTPLCSGPEAEEEPCLLQGC 3249


>gi|239755591 PREDICTED: similar to Putative ubiquitin-like protein
           FUBI-like protein ENSP00000310146 [Homo sapiens]
          Length = 137

 Score = 29.3 bits (64), Expect = 3.3
 Identities = 26/85 (30%), Positives = 39/85 (45%), Gaps = 6/85 (7%)

Query: 106 EYAANLKSMVQYLKSVDIPENRVILITPTPLCETAWEEQCIIQGCKLNRLNSVVGEY--A 163
           E  A  K+ V  L+ + IPE++V+L+  +PL   A   QC   G +      VVG     
Sbjct: 44  ETVAQSKAHVASLEGL-IPEDKVVLLAGSPLQNEATLGQC---GVEALTTLEVVGRRLGG 99

Query: 164 NACLQVAQDCGTDVLDLWTLMQDSQ 188
           N CL +  +       LWT +  S+
Sbjct: 100 NNCLSLQVNPVQPARYLWTTLHSSK 124


>gi|5453722 lysophospholipase 1 [Homo sapiens]
          Length = 230

 Score = 29.3 bits (64), Expect = 3.3
 Identities = 19/77 (24%), Positives = 38/77 (49%), Gaps = 2/77 (2%)

Query: 54  FSGYNTRWAKIILPRLIRKGNSLDIPVAVTIFFGANDSALKDENPKQHIPLEEYAANLKS 113
           F+G  +   K I P    +  +L++ VA+  +F      L  ++ +    +++ A N+K+
Sbjct: 41  FAGIRSSHIKYICPHAPVRPVTLNMNVAMPSWFDI--IGLSPDSQEDESGIKQAAENIKA 98

Query: 114 MVQYLKSVDIPENRVIL 130
           ++       IP NR+IL
Sbjct: 99  LIDQEVKNGIPSNRIIL 115


>gi|46249351 homer 2 isoform 2 [Homo sapiens]
          Length = 354

 Score = 28.9 bits (63), Expect = 4.3
 Identities = 25/91 (27%), Positives = 43/91 (47%), Gaps = 9/91 (9%)

Query: 87  GANDSALKDENPKQHIPLEEYAANLKSMVQYLKSVDIPENRVILITPTPLCETA-----W 141
           G  ++ LK EN K  I L + AAN+K     L+++     R+     T L E+A     W
Sbjct: 156 GPANTHLKSENDKLKIALTQSAANVKKWEIELQTLRESNARL----TTALQESAASVEQW 211

Query: 142 EEQCIIQGCKLNRLNSVVGEYANACLQVAQD 172
           + Q  I   + +RL + + E    C ++ ++
Sbjct: 212 KRQFSICRDENDRLRNKIDELEEQCSEINRE 242


>gi|46249349 homer 2 isoform 1 [Homo sapiens]
          Length = 343

 Score = 28.9 bits (63), Expect = 4.3
 Identities = 25/91 (27%), Positives = 43/91 (47%), Gaps = 9/91 (9%)

Query: 87  GANDSALKDENPKQHIPLEEYAANLKSMVQYLKSVDIPENRVILITPTPLCETA-----W 141
           G  ++ LK EN K  I L + AAN+K     L+++     R+     T L E+A     W
Sbjct: 145 GPANTHLKSENDKLKIALTQSAANVKKWEIELQTLRESNARL----TTALQESAASVEQW 200

Query: 142 EEQCIIQGCKLNRLNSVVGEYANACLQVAQD 172
           + Q  I   + +RL + + E    C ++ ++
Sbjct: 201 KRQFSICRDENDRLRNKIDELEEQCSEINRE 231


>gi|9966764 lysophospholipase II [Homo sapiens]
          Length = 231

 Score = 28.5 bits (62), Expect = 5.7
 Identities = 16/68 (23%), Positives = 35/68 (51%), Gaps = 2/68 (2%)

Query: 63  KIILPRLIRKGNSLDIPVAVTIFFGANDSALKDENPKQHIPLEEYAANLKSMVQYLKSVD 122
           K I P   R   +L++ + +  +F      L  + P+    +++ A N+K+++++     
Sbjct: 53  KYICPHAPRIPVTLNMKMVMPSWFDL--MGLSPDAPEDEAGIKKAAENIKALIEHEMKNG 110

Query: 123 IPENRVIL 130
           IP NR++L
Sbjct: 111 IPANRIVL 118


>gi|5453557 ariadne homolog 2 [Homo sapiens]
          Length = 493

 Score = 28.5 bits (62), Expect = 5.7
 Identities = 12/51 (23%), Positives = 23/51 (45%), Gaps = 4/51 (7%)

Query: 97  NPKQHIPLEEYAANLKSMVQYLKSVDIPENRVILITPTPLCETAWEEQCII 147
           NP +H+P      +    +Q+++     EN + L      C + WE+ C +
Sbjct: 125 NPSKHVPTSHPPHHCAVCMQFVRK----ENLLSLACQHQFCRSCWEQHCSV 171


>gi|126032338 ryanodine receptor 3 [Homo sapiens]
          Length = 4870

 Score = 28.1 bits (61), Expect = 7.4
 Identities = 18/66 (27%), Positives = 28/66 (42%), Gaps = 6/66 (9%)

Query: 58   NTRWAKIILPRLIRKGNSLDIPVAVTIFFGANDSALKDENPKQHIPLEEYAANLKSMVQY 117
            N  W K +  ++I K   L     +    G       D+N     P+EE  A   S+V +
Sbjct: 4547 NNYWDKFVKRKVINKYGDLYGAERIAELLGL------DKNALDFSPVEETKAEAASLVSW 4600

Query: 118  LKSVDI 123
            L S+D+
Sbjct: 4601 LSSIDM 4606


>gi|34485720 echinoderm microtubule associated protein like 5 [Homo
           sapiens]
          Length = 1977

 Score = 27.7 bits (60), Expect = 9.7
 Identities = 14/50 (28%), Positives = 22/50 (44%)

Query: 152 LNRLNSVVGEYANACLQVAQDCGTDVLDLWTLMQDSQDFSSYLSDGLHLS 201
           +N +NSV G Y    L  A D G   L  +  ++    F  Y+    H++
Sbjct: 518 INDINSVDGNYIGQVLVTADDYGIIKLFRYPCLRKGAKFRKYIGHSAHVT 567


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.321    0.138    0.435 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 9,687,233
Number of Sequences: 37866
Number of extensions: 417685
Number of successful extensions: 818
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 8
Number of HSP's that attempted gapping in prelim test: 815
Number of HSP's gapped (non-prelim): 11
length of query: 248
length of database: 18,247,518
effective HSP length: 100
effective length of query: 148
effective length of database: 14,460,918
effective search space: 2140215864
effective search space used: 2140215864
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 60 (27.7 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.