Search of human proteins with 7706575

Search of human proteins with 7706575

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|7706575 transmembrane 7 superfamily member 3 [Homo sapiens]
         (570 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|7706575 transmembrane 7 superfamily member 3 [Homo sapiens]       1156   0.0  
gi|52353302 transmembrane protein 198 [Homo sapiens]                   50   4e-06
gi|224458301 family with sequence similarity 186, member A [Homo...    35   0.24 
gi|14149981 transmembrane protein 117 [Homo sapiens]                   33   0.92 
gi|4505697 pendrin [Homo sapiens]                                      32   2.0  
gi|56786136 sperm-specific sodium proton exchanger [Homo sapiens]      32   2.0  
gi|62530386 fucose-1-phosphate guanyltransferase [Homo sapiens]        32   2.0  
gi|166197662 chloride intracellular channel 5 isoform a [Homo sa...    32   2.0  
gi|52218834 olfactory receptor, family 10, subfamily H, member 4...    31   2.7  
gi|23592230 olfactory receptor, family 5, subfamily P, member 3 ...    31   2.7  
gi|194239733 solute carrier family 9 (sodium/hydrogen exchanger)...    31   3.5  

>gi|7706575 transmembrane 7 superfamily member 3 [Homo sapiens]
          Length = 570

 Score = 1156 bits (2990), Expect = 0.0
 Identities = 570/570 (100%), Positives = 570/570 (100%)

Query: 1   MGFLQLLVVAVLASEHRVAGAAEVFGNSSEGLIEFSVGKFRYFELNRPFPEEAILHDISS 60
           MGFLQLLVVAVLASEHRVAGAAEVFGNSSEGLIEFSVGKFRYFELNRPFPEEAILHDISS
Sbjct: 1   MGFLQLLVVAVLASEHRVAGAAEVFGNSSEGLIEFSVGKFRYFELNRPFPEEAILHDISS 60

Query: 61  NVTFLIFQIHSQYQNTTVSFSPTLLSNSSETGTASGLVFILRPEQSTCTWYLGTSGIQPV 120
           NVTFLIFQIHSQYQNTTVSFSPTLLSNSSETGTASGLVFILRPEQSTCTWYLGTSGIQPV
Sbjct: 61  NVTFLIFQIHSQYQNTTVSFSPTLLSNSSETGTASGLVFILRPEQSTCTWYLGTSGIQPV 120

Query: 121 QNMAILLSYSERDPVPGGCNLEFDLDIDPNIYLEYNFFETTIKFAPANLGYARGVDPPPC 180
           QNMAILLSYSERDPVPGGCNLEFDLDIDPNIYLEYNFFETTIKFAPANLGYARGVDPPPC
Sbjct: 121 QNMAILLSYSERDPVPGGCNLEFDLDIDPNIYLEYNFFETTIKFAPANLGYARGVDPPPC 180

Query: 181 DAGTDQDSRWRLQYDVYQYFLPENDLTEEMLLKHLQRMVSVPQVKASALKVVTLTANDKT 240
           DAGTDQDSRWRLQYDVYQYFLPENDLTEEMLLKHLQRMVSVPQVKASALKVVTLTANDKT
Sbjct: 181 DAGTDQDSRWRLQYDVYQYFLPENDLTEEMLLKHLQRMVSVPQVKASALKVVTLTANDKT 240

Query: 241 SVSFSSLPGQGVIYNVIVWDPFLNTSAAYIPAHTYACSFEAGEGSCASLGRVSSKVFFTL 300
           SVSFSSLPGQGVIYNVIVWDPFLNTSAAYIPAHTYACSFEAGEGSCASLGRVSSKVFFTL
Sbjct: 241 SVSFSSLPGQGVIYNVIVWDPFLNTSAAYIPAHTYACSFEAGEGSCASLGRVSSKVFFTL 300

Query: 301 FALLGFFICFFGHRFWKTELFFIGFIIMGFFFYILITRLTPIKYDVNLILTAVTGSVGGM 360
           FALLGFFICFFGHRFWKTELFFIGFIIMGFFFYILITRLTPIKYDVNLILTAVTGSVGGM
Sbjct: 301 FALLGFFICFFGHRFWKTELFFIGFIIMGFFFYILITRLTPIKYDVNLILTAVTGSVGGM 360

Query: 361 FLVAVWWRFGILSICMLCVGLVLGFLISSVTFFTPLGNLKIFHDDGVFWVTFSCIAILIP 420
           FLVAVWWRFGILSICMLCVGLVLGFLISSVTFFTPLGNLKIFHDDGVFWVTFSCIAILIP
Sbjct: 361 FLVAVWWRFGILSICMLCVGLVLGFLISSVTFFTPLGNLKIFHDDGVFWVTFSCIAILIP 420

Query: 421 VVFMGCLRILNILTCGVIGSYSVVLAIDSYWSTSLSYITLNVLKRALNKDFHRAFTNVPF 480
           VVFMGCLRILNILTCGVIGSYSVVLAIDSYWSTSLSYITLNVLKRALNKDFHRAFTNVPF
Sbjct: 421 VVFMGCLRILNILTCGVIGSYSVVLAIDSYWSTSLSYITLNVLKRALNKDFHRAFTNVPF 480

Query: 481 QTNDFIILAVWGMLAVSGITLQIRRERGRPFFPPHPYKLWKQERERRVTNILDPSYHIPP 540
           QTNDFIILAVWGMLAVSGITLQIRRERGRPFFPPHPYKLWKQERERRVTNILDPSYHIPP
Sbjct: 481 QTNDFIILAVWGMLAVSGITLQIRRERGRPFFPPHPYKLWKQERERRVTNILDPSYHIPP 540

Query: 541 LRERLYGRLTQIKGLFQKEQPAGERTPLLL 570
           LRERLYGRLTQIKGLFQKEQPAGERTPLLL
Sbjct: 541 LRERLYGRLTQIKGLFQKEQPAGERTPLLL 570


>gi|52353302 transmembrane protein 198 [Homo sapiens]
          Length = 360

 Score = 50.4 bits (119), Expect = 4e-06
 Identities = 50/205 (24%), Positives = 88/205 (42%), Gaps = 17/205 (8%)

Query: 303 LLGFFICFFGHRFWKTELFFIGFIIMGFFFYILITRLTPIKYDVNLILTAVTGSVGGMFL 362
           L G   CFFG+R +K  LF  G +      ++L  R   +  +  L   A  G   G+ L
Sbjct: 47  LFGVVYCFFGYRCFKAVLFLTGLLFGSVVIFLLCYRERVL--ETQLSAGASAGIALGIGL 104

Query: 363 VAVWWRFGILSICMLCVGLVLGFLISSVTFFTPLGNLKIFHDDGVFWVTFSCI---AILI 419
           +       + S+ +  VGL+LG L+++      LG+   ++  G  W     +    +L 
Sbjct: 105 LCGLVAMLVRSVGLFLVGLLLGLLLAAAAL---LGSAP-YYQPGSVWGPLGLLLGGGLLC 160

Query: 420 PVVFMGCLRILNILTCGVIGSYSVVLAIDSYWSTSLSYITLNVLKRALNKDFHRAFTNVP 479
            ++ +   R L  L   V G+  +  A D +    L  +   V++R       RA    P
Sbjct: 161 ALLTLRWPRPLTTLATAVTGAALIATAADYF--AELLLLGRYVVERL------RAAPVPP 212

Query: 480 FQTNDFIILAVWGMLAVSGITLQIR 504
                + +LA+W +L++ G+ +Q R
Sbjct: 213 LCWRSWALLALWPLLSLMGVLVQWR 237


>gi|224458301 family with sequence similarity 186, member A [Homo
            sapiens]
          Length = 2351

 Score = 34.7 bits (78), Expect = 0.24
 Identities = 32/105 (30%), Positives = 45/105 (42%), Gaps = 7/105 (6%)

Query: 33   IEFSVGKFRYFELNRPFPEEAILHDISSNVTFLIFQIHSQYQNTTVSFSP-----TLLSN 87
            + F+  KF+  E++    E  IL D  +  +F  FQ H     T V  +P      LL+ 
Sbjct: 1981 VPFTTKKFQMSEVSDTSEETQILRDTFAIESFRTFQSHFTKYRTPVYQTPYTDERALLTL 2040

Query: 88   SSETGTASGLVFILRPEQ-STCTWYLGTSGIQPVQNMAILLSYSE 131
               T + S L  +LR  Q S   WY   S   P+    IL S S+
Sbjct: 2041 MKPTTSPSSLTTLLRTSQISPLEWY-QKSRFPPIDKPWILSSVSD 2084


>gi|14149981 transmembrane protein 117 [Homo sapiens]
          Length = 514

 Score = 32.7 bits (73), Expect = 0.92
 Identities = 30/119 (25%), Positives = 49/119 (41%), Gaps = 7/119 (5%)

Query: 331 FFYILITRLTPIKYDVNLILTAVTGS----VGGMFLVAVWWRFGILSICMLCV--GLVLG 384
           FF  LI    P+ +        V G+    V   +   V WR   + + +L +  GL+ G
Sbjct: 24  FFNFLIFAEDPVSHSQTEANVIVVGNCFSFVTNKYPRGVGWRILKVLLWLLAILTGLIAG 83

Query: 385 FLISSVTFFTPLGNLKIFHDDGVFWVTFSCIAILIPVVFMGCLRILNILTCGVIGSYSV 443
             +     F  L  LK+F +D   W+T     IL   +F      + +L  G +G+Y +
Sbjct: 84  KFLFHQRLFGQLLRLKMFREDHGSWMTMFFSTILFLFIFSHIYNTI-LLMDGNMGAYII 141


>gi|4505697 pendrin [Homo sapiens]
          Length = 780

 Score = 31.6 bits (70), Expect = 2.0
 Identities = 43/141 (30%), Positives = 57/141 (40%), Gaps = 29/141 (20%)

Query: 321 FFIGFIIMGFFFYILITRLTPIKYDVNLILTAVTGSVGGMFLVAVWWRFGILSICMLCVG 380
           F I  I  GFF   + T          L  TAV  S GG   VA      I+ I +L +G
Sbjct: 388 FGISNIFSGFFSCFVATTA--------LSRTAVQESTGGKTQVAGIISAAIVMIAILALG 439

Query: 381 LVLGFLISSVTFFTPLGNLK-IFHD-------------DGVFWVTFSCIAILIPVVFMGC 426
            +L  L  SV     + NLK +F               D V WV F+CI  +I  + +G 
Sbjct: 440 KLLEPLQKSVLAAVVIANLKGMFMQLCDIPRLWRQNKIDAVIWV-FTCIVSIILGLDLGL 498

Query: 427 LRILNILTCGVIGSYSVVLAI 447
           L  L      + G  +VVL +
Sbjct: 499 LAGL------IFGLLTVVLRV 513


>gi|56786136 sperm-specific sodium proton exchanger [Homo sapiens]
          Length = 1177

 Score = 31.6 bits (70), Expect = 2.0
 Identities = 37/147 (25%), Positives = 67/147 (45%), Gaps = 27/147 (18%)

Query: 325 FIIMGFFFYILITRLTPIKYDVNLILTAVTGSVGGMFLVAVWWRFGILSICMLCVGL--- 381
           +II  F F IL ++L  I++ ++ +       +  +F +     + I  IC L VG+   
Sbjct: 215 YIIASFLFGILSSKL--IQFWMSTVFGDDVNHISLIFSIL----YLIFYICEL-VGMSGI 267

Query: 382 ----VLGFLISSVTFFTPLGNLKIFHDDGVFWVTFSCIAILIPVVFMGCLRILNILTCGV 437
               ++G L++S +F   +    +      FW   S IA L+   F G L   +      
Sbjct: 268 FTLAIVGLLLNSTSFKAAIEETLLLE----FWTFLSRIAFLMVFTFFGLLIPAH------ 317

Query: 438 IGSYSVVLAIDSYWSTSLSYITLNVLK 464
             +Y  +  +D Y+S ++ Y+TL VL+
Sbjct: 318 --TYLYIEFVDIYYSLNI-YLTLIVLR 341


>gi|62530386 fucose-1-phosphate guanyltransferase [Homo sapiens]
          Length = 594

 Score = 31.6 bits (70), Expect = 2.0
 Identities = 23/97 (23%), Positives = 42/97 (43%), Gaps = 10/97 (10%)

Query: 199 YFLPENDLTEEMLLKHLQRMV--SVPQVKASALKVVTLTANDKTSVSFSSL-------PG 249
           YF  +N L  E+ L+ +   +   +P+       ++    + + SV+  S+       P 
Sbjct: 368 YFTSDNSLKSELGLQSITFSIFPDIPECSGKTSCIIQSILDSRCSVAPGSVVEYSRLGPD 427

Query: 250 QGVIYNVIVWDPFLNTSAAYIPAHTYACSFEAGEGSC 286
             V  N I+   ++ T AA +PAH++ CS       C
Sbjct: 428 VSVGENCIISGSYILTKAA-LPAHSFVCSLSLKMNRC 463


>gi|166197662 chloride intracellular channel 5 isoform a [Homo
           sapiens]
          Length = 410

 Score = 31.6 bits (70), Expect = 2.0
 Identities = 15/45 (33%), Positives = 23/45 (51%)

Query: 195 DVYQYFLPENDLTEEMLLKHLQRMVSVPQVKASALKVVTLTANDK 239
           DV++Y  PENDL    L  H    VSV  +K     + ++ + D+
Sbjct: 35  DVHEYLRPENDLYATQLNTHEYDFVSVYTIKGEETSLASVQSEDR 79


>gi|52218834 olfactory receptor, family 10, subfamily H, member 4
           [Homo sapiens]
          Length = 316

 Score = 31.2 bits (69), Expect = 2.7
 Identities = 51/213 (23%), Positives = 85/213 (39%), Gaps = 51/213 (23%)

Query: 310 FFGHRFWKTELFFIGFIIMGFFFYILITRLTPIKYDVNLI------LTAVT---GSVGGM 360
           FF   F  T  F +  ++MG+  Y+ I    P++Y+V +       L A T   GSV GM
Sbjct: 103 FFSFMFGFTHSFLL--LVMGYDRYVAICH--PLRYNVLMSPRDCAHLVACTWAGGSVMGM 158

Query: 361 FLVAVWWRFG-----------------------------ILSICMLCVGLVLG--FLISS 389
            +  + +                                I+ + ++CV  ++G  FLI  
Sbjct: 159 MVTTIVFHLTFCGSNVIHHFFCHVLSLLKLACENKTSSVIMGVMLVCVTALIGCLFLIIL 218

Query: 390 VTFFTPLGNLKIFHDDGVFWVTFSCIAILIPVV-FMGCLRILNILTCGVIGSYSVVLAID 448
              F     L+I   +G      +C++ L  VV        + +   G+   YS  L   
Sbjct: 219 SYVFIVAAILRIPSAEGRHKTFSTCVSHLTVVVTHYSFASFIYLKPKGLHSMYSDALMAT 278

Query: 449 SY--WSTSLSYITLNV----LKRALNKDFHRAF 475
           +Y  ++  LS I  ++    LK A+NK+F+R F
Sbjct: 279 TYTVFTPFLSPIIFSLRNKELKNAINKNFYRKF 311


>gi|23592230 olfactory receptor, family 5, subfamily P, member 3
           [Homo sapiens]
          Length = 311

 Score = 31.2 bits (69), Expect = 2.7
 Identities = 27/106 (25%), Positives = 48/106 (45%), Gaps = 9/106 (8%)

Query: 374 ICMLCVGL-VLGFLISSVTFFTPLGNLKIFHDDGV--FWVTFSCIAILIPVVFMGCLRIL 430
           +C++ VG+  LG  +++ TF   L  L     + V  F+  +S      P++ + C    
Sbjct: 140 VCIILVGMSYLGGCVNAWTFIGCLLRLSFCGPNKVNHFFCDYS------PLLKLACSHDF 193

Query: 431 NILTCGVIGSYSVVLAIDSYWSTSLSYITLNVLKRALNKDFHRAFT 476
                  I S S+++A     + S  YI + +LK    K  H+AF+
Sbjct: 194 TFEIIPAISSGSIIVATVCVIAISYIYILITILKMHSTKGRHKAFS 239


>gi|194239733 solute carrier family 9 (sodium/hydrogen exchanger),
           isoform 3 [Homo sapiens]
          Length = 834

 Score = 30.8 bits (68), Expect = 3.5
 Identities = 37/134 (27%), Positives = 62/134 (46%), Gaps = 7/134 (5%)

Query: 325 FIIMGFFFYILITRLTPIKYDVNLILTAVTG-SVGGMFLVAVWWRFGILSICMLCVGLVL 383
           FII+ F   +L   +T + Y+V     A+ G +V G+  V     F ++S+    VG+V 
Sbjct: 210 FIIV-FGESLLNDAVTVVLYNVFESFVALGGDNVTGVDCVKGIVSFFVVSLGGTLVGVVF 268

Query: 384 GFLISSVTFFTPLGNLKIFHDDGVFWVTFSCIAILIPVVFMGCLRILNILTCGVIGSYSV 443
            FL+S VT FT   +++I     VF +++      +    +    IL I  CG+     V
Sbjct: 269 AFLLSLVTRFTK--HVRIIEPGFVFIISY---LSYLTSEMLSLSAILAITFCGICCQKYV 323

Query: 444 VLAIDSYWSTSLSY 457
              I    +T++ Y
Sbjct: 324 KANISEQSATTVRY 337


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.327    0.142    0.444 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 21,512,931
Number of Sequences: 37866
Number of extensions: 959574
Number of successful extensions: 2489
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 8
Number of HSP's that attempted gapping in prelim test: 2483
Number of HSP's gapped (non-prelim): 14
length of query: 570
length of database: 18,247,518
effective HSP length: 108
effective length of query: 462
effective length of database: 14,157,990
effective search space: 6540991380
effective search space used: 6540991380
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.7 bits)
S2: 65 (29.6 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.