Search of human proteins with 7669492

Search of human proteins with 7669492

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|7669492 glyceraldehyde-3-phosphate dehydrogenase [Homo
sapiens]
         (335 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|7669492 glyceraldehyde-3-phosphate dehydrogenase [Homo sapiens]    674   0.0  
gi|7657116 glyceraldehyde-3-phosphate dehydrogenase, spermatogen...   464   e-131
gi|169213766 PREDICTED: similar to hCG1642820 [Homo sapiens]           77   3e-14
gi|151301127 dynein, axonemal, heavy chain 7 [Homo sapiens]            32   0.61 
gi|21071008 transcobalamin I precursor [Homo sapiens]                  31   1.8  
gi|170650685 zinc finger and BTB domain containing 37 isoform a ...    30   4.0  
gi|239754668 PREDICTED: mucin 12 [Homo sapiens]                        29   5.2  
gi|239743293 PREDICTED: mucin 12 [Homo sapiens]                        28   8.8  
gi|21389501 coiled-coil domain containing 52 [Homo sapiens]            28   8.8  

>gi|7669492 glyceraldehyde-3-phosphate dehydrogenase [Homo sapiens]
          Length = 335

 Score =  674 bits (1738), Expect = 0.0
 Identities = 335/335 (100%), Positives = 335/335 (100%)

Query: 1   MGKVKVGVNGFGRIGRLVTRAAFNSGKVDIVAINDPFIDLNYMVYMFQYDSTHGKFHGTV 60
           MGKVKVGVNGFGRIGRLVTRAAFNSGKVDIVAINDPFIDLNYMVYMFQYDSTHGKFHGTV
Sbjct: 1   MGKVKVGVNGFGRIGRLVTRAAFNSGKVDIVAINDPFIDLNYMVYMFQYDSTHGKFHGTV 60

Query: 61  KAENGKLVINGNPITIFQERDPSKIKWGDAGAEYVVESTGVFTTMEKAGAHLQGGAKRVI 120
           KAENGKLVINGNPITIFQERDPSKIKWGDAGAEYVVESTGVFTTMEKAGAHLQGGAKRVI
Sbjct: 61  KAENGKLVINGNPITIFQERDPSKIKWGDAGAEYVVESTGVFTTMEKAGAHLQGGAKRVI 120

Query: 121 ISAPSADAPMFVMGVNHEKYDNSLKIISNASCTTNCLAPLAKVIHDNFGIVEGLMTTVHA 180
           ISAPSADAPMFVMGVNHEKYDNSLKIISNASCTTNCLAPLAKVIHDNFGIVEGLMTTVHA
Sbjct: 121 ISAPSADAPMFVMGVNHEKYDNSLKIISNASCTTNCLAPLAKVIHDNFGIVEGLMTTVHA 180

Query: 181 ITATQKTVDGPSGKLWRDGRGALQNIIPASTGAAKAVGKVIPELNGKLTGMAFRVPTANV 240
           ITATQKTVDGPSGKLWRDGRGALQNIIPASTGAAKAVGKVIPELNGKLTGMAFRVPTANV
Sbjct: 181 ITATQKTVDGPSGKLWRDGRGALQNIIPASTGAAKAVGKVIPELNGKLTGMAFRVPTANV 240

Query: 241 SVVDLTCRLEKPAKYDDIKKVVKQASEGPLKGILGYTEHQVVSSDFNSDTHSSTFDAGAG 300
           SVVDLTCRLEKPAKYDDIKKVVKQASEGPLKGILGYTEHQVVSSDFNSDTHSSTFDAGAG
Sbjct: 241 SVVDLTCRLEKPAKYDDIKKVVKQASEGPLKGILGYTEHQVVSSDFNSDTHSSTFDAGAG 300

Query: 301 IALNDHFVKLISWYDNEFGYSNRVVDLMAHMASKE 335
           IALNDHFVKLISWYDNEFGYSNRVVDLMAHMASKE
Sbjct: 301 IALNDHFVKLISWYDNEFGYSNRVVDLMAHMASKE 335


>gi|7657116 glyceraldehyde-3-phosphate dehydrogenase, spermatogenic
           [Homo sapiens]
          Length = 408

 Score =  464 bits (1193), Expect = e-131
 Identities = 228/334 (68%), Positives = 276/334 (82%), Gaps = 2/334 (0%)

Query: 3   KVKVGVNGFGRIGRLVTRAAFNSGKVDIVAINDPFIDLNYMVYMFQYDSTHGKFHGTVKA 62
           ++ VG+NGFGRIGRLV RA    G V +VA+NDPFID  YMVYMF+YDSTHG++ G+V+ 
Sbjct: 75  ELTVGINGFGRIGRLVLRACMEKG-VKVVAVNDPFIDPEYMVYMFKYDSTHGRYKGSVEF 133

Query: 63  ENGKLVINGNPITIFQERDPSKIKWGDAGAEYVVESTGVFTTMEKAGAHLQGGAKRVIIS 122
            NG+LV++ + I+++Q ++P +I W   G+ YVVESTGV+ +++ A  H+  GA+RV+IS
Sbjct: 134 RNGQLVVDNHEISVYQCKEPKQIPWRAVGSPYVVESTGVYLSIQAASDHISAGAQRVVIS 193

Query: 123 APSADAPMFVMGVNHEKYD-NSLKIISNASCTTNCLAPLAKVIHDNFGIVEGLMTTVHAI 181
           APS DAPMFVMGVN   Y+  S+ I+SNASCTTNCLAPLAKVIH+ FGIVEGLMTTVH+ 
Sbjct: 194 APSPDAPMFVMGVNENDYNPGSMNIVSNASCTTNCLAPLAKVIHERFGIVEGLMTTVHSY 253

Query: 182 TATQKTVDGPSGKLWRDGRGALQNIIPASTGAAKAVGKVIPELNGKLTGMAFRVPTANVS 241
           TATQKTVDGPS K WRDGRGA QNIIPASTGAAKAV KVIPEL GKLTGMAFRVPT +VS
Sbjct: 254 TATQKTVDGPSRKAWRDGRGAHQNIIPASTGAAKAVTKVIPELKGKLTGMAFRVPTPDVS 313

Query: 242 VVDLTCRLEKPAKYDDIKKVVKQASEGPLKGILGYTEHQVVSSDFNSDTHSSTFDAGAGI 301
           VVDLTCRL +PA Y  IK+ VK A++GP+ GIL YTE +VVS+DF  DTHSS FDA AGI
Sbjct: 314 VVDLTCRLAQPAPYSAIKEAVKAAAKGPMAGILAYTEDEVVSTDFLGDTHSSIFDAKAGI 373

Query: 302 ALNDHFVKLISWYDNEFGYSNRVVDLMAHMASKE 335
           ALND+FVKLISWYDNE+GYS+RVVDL+ +M S++
Sbjct: 374 ALNDNFVKLISWYDNEYGYSHRVVDLLRYMFSRD 407


>gi|169213766 PREDICTED: similar to hCG1642820 [Homo sapiens]
          Length = 87

 Score = 76.6 bits (187), Expect = 3e-14
 Identities = 51/102 (50%), Positives = 56/102 (54%), Gaps = 20/102 (19%)

Query: 171 VEGLMTTVHAITATQKTVDGPSGKLWRDGRGALQNIIPASTGAAKAVGKVIPELNGKLTG 230
           +EGLMTT             P G  WRD         P      +  G+ IP LN KLTG
Sbjct: 1   MEGLMTTA------------PLGN-WRDKHH------PCIYWHGQGCGQ-IPALNRKLTG 40

Query: 231 MAFRVPTANVSVVDLTCRLEKPAKYDDIKKVVKQASEGPLKG 272
            AFRVP  NV VVD TC LEKPAKY D+KKVVKQA  GP +G
Sbjct: 41  TAFRVPATNVLVVDPTCHLEKPAKYHDLKKVVKQALGGPPQG 82


>gi|151301127 dynein, axonemal, heavy chain 7 [Homo sapiens]
          Length = 4024

 Score = 32.3 bits (72), Expect = 0.61
 Identities = 16/71 (22%), Positives = 40/71 (56%), Gaps = 1/71 (1%)

Query: 228  LTGMAFRVPTANVSVVDLTCRLEKPAKYDDIKKVVKQASEGPLKGILGYTEHQVVSSDFN 287
            +T +A  +   +V  V+++   +    ++D+K ++++ +EG ++G+  +T+ Q+    F 
Sbjct: 2350 VTRLAAHMADYSVFQVEISKGYDTTEWHEDLKVILRKCAEGEMQGVFLFTDTQIKEESFL 2409

Query: 288  SDTHSSTFDAG 298
             D  S+  +AG
Sbjct: 2410 EDV-SNLLNAG 2419


>gi|21071008 transcobalamin I precursor [Homo sapiens]
          Length = 433

 Score = 30.8 bits (68), Expect = 1.8
 Identities = 31/108 (28%), Positives = 48/108 (44%), Gaps = 11/108 (10%)

Query: 214 AKAVGKVIPELNGKLTGMAFRVPTANVSVVDLTCRLEKPAKYDDIKKVVKQASEGPLKGI 273
           A+ V    PE      G  F V T  ++V+ LTC ++K      IK     A EG LK I
Sbjct: 164 AEVVNHFTPENKNYYFGSQFSVDTGAMAVLALTC-VKKSLINGQIK-----ADEGSLKNI 217

Query: 274 LGYTE---HQVVSSDFNSDTHSSTFDAGAGIALNDHFVKLISWYDNEF 318
             YT+    +++S    +    +TF  G   A+   FV    + +N++
Sbjct: 218 SIYTKSLVEKILSEKKENGLIGNTFSTGE--AMQALFVSSDYYNENDW 263


>gi|170650685 zinc finger and BTB domain containing 37 isoform a
           [Homo sapiens]
          Length = 503

 Score = 29.6 bits (65), Expect = 4.0
 Identities = 16/43 (37%), Positives = 22/43 (51%), Gaps = 4/43 (9%)

Query: 241 SVVDLT----CRLEKPAKYDDIKKVVKQASEGPLKGILGYTEH 279
           SVV LT     R E P + D+ K+   Q  E  + G+ GY E+
Sbjct: 314 SVVPLTERHRARSESPGRMDEPKQPSSQVEESAMMGVSGYVEY 356


>gi|239754668 PREDICTED: mucin 12 [Homo sapiens]
          Length = 1952

 Score = 29.3 bits (64), Expect = 5.2
 Identities = 30/128 (23%), Positives = 45/128 (35%), Gaps = 17/128 (13%)

Query: 136  NHEKYDNSLKIISNASCTTNCLAPLAKVIHDNFGIVE-----------GLM---TTVHAI 181
            +H    ++   +S  S T + L P +   H   G  E           GL+   T VH+ 
Sbjct: 1057 SHSSPGSTDTTLSPRSTTASSLGPESTTFHSGPGSTETTLLPDNTTASGLLEASTPVHSS 1116

Query: 182  TATQKTVDGPSGKLWRDGRGALQNIIPASTG---AAKAVGKVIPELNGKLTGMAFRVPTA 238
            T + +T   P+G   R G        P+S     A         EL+    G    +PT 
Sbjct: 1117 TGSPRTTLSPAGSTTRQGESTTFQSWPSSKDTMPAPPTTTSAFVELSTTSHGSPSSIPTT 1176

Query: 239  NVSVVDLT 246
            + S    T
Sbjct: 1177 HFSASSTT 1184


>gi|239743293 PREDICTED: mucin 12 [Homo sapiens]
          Length = 5478

 Score = 28.5 bits (62), Expect = 8.8
 Identities = 31/128 (24%), Positives = 44/128 (34%), Gaps = 17/128 (13%)

Query: 136  NHEKYDNSLKIISNASCTTNCLAPLAKVIHDNFGIVE-----------GLM---TTVHAI 181
            +H    ++   +S  S T + L P +   H + G  E           GL+   T VH+ 
Sbjct: 4390 SHSSPGSTDTTLSPGSTTASSLGPESTTFHSSPGSTETTLLPDNTTASGLLEASTPVHSS 4449

Query: 182  TATQKTVDGPSGKLWRDGRGALQNIIPAS---TGAAKAVGKVIPELNGKLTGMAFRVPTA 238
            T +  T   P+G   R G        P S   T A         EL+    G     PT 
Sbjct: 4450 TGSPHTTLSPAGSTTRQGESTTFQSWPNSKDTTPAPPTTTSAFVELSTTSHGSPSSTPTT 4509

Query: 239  NVSVVDLT 246
            + S    T
Sbjct: 4510 HFSASSTT 4517


>gi|21389501 coiled-coil domain containing 52 [Homo sapiens]
          Length = 855

 Score = 28.5 bits (62), Expect = 8.8
 Identities = 17/56 (30%), Positives = 26/56 (46%), Gaps = 4/56 (7%)

Query: 136 NHEKYDNSLKIISNASCTTNCLAPLAKVIHDNFGIVEGLMTTVHAITATQKTVDGP 191
           N  + DNSL    N+   TN    L ++  +NF ++  L T +    ATQ  +  P
Sbjct: 186 NENELDNSL----NSQSNTNTDRFLQQLTEENFELISKLWTDIQQKIATQSQITPP 237


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.317    0.134    0.393 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 11,830,297
Number of Sequences: 37866
Number of extensions: 492412
Number of successful extensions: 1042
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 5
Number of HSP's that attempted gapping in prelim test: 1034
Number of HSP's gapped (non-prelim): 15
length of query: 335
length of database: 18,247,518
effective HSP length: 103
effective length of query: 232
effective length of database: 14,347,320
effective search space: 3328578240
effective search space used: 3328578240
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 62 (28.5 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.