Search of human proteins with 7661568

Search of human proteins with 7661568

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|7661568 phosphoglucomutase 3 [Homo sapiens]
         (542 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|7661568 phosphoglucomutase 3 [Homo sapiens]                       1079   0.0  
gi|31377548 phosphoglucomutase 2-like 1 [Homo sapiens]                 37   0.046
gi|63055049 phosphoglucomutase 2 [Homo sapiens]                        36   0.10 
gi|115298678 complement component 3 precursor [Homo sapiens]           32   1.5  
gi|169214179 PREDICTED: similar to complement component 3 [Homo ...    32   1.5  
gi|239787829 glioma tumor suppressor candidate region gene 2 [Ho...    31   3.3  
gi|166235140 seizure related 6 homolog (mouse)-like 2 isoform 4 ...    30   5.6  
gi|166235138 seizure related 6 homolog (mouse)-like 2 isoform 3 ...    30   5.6  
gi|166235136 seizure related 6 homolog (mouse)-like 2 isoform 2 ...    30   5.6  
gi|6912612 seizure related 6 homolog (mouse)-like 2 isoform 1 [H...    30   5.6  
gi|156151411 hypothetical protein LOC80185 [Homo sapiens]              30   7.3  
gi|156151409 hypothetical protein LOC80185 [Homo sapiens]              30   7.3  

>gi|7661568 phosphoglucomutase 3 [Homo sapiens]
          Length = 542

 Score = 1079 bits (2791), Expect = 0.0
 Identities = 542/542 (100%), Positives = 542/542 (100%)

Query: 1   MDLGAITKYSALHAKPNGLILQYGTAGFRTKAEHLDHVMFRMGLLAVLRSKQTKSTIGVM 60
           MDLGAITKYSALHAKPNGLILQYGTAGFRTKAEHLDHVMFRMGLLAVLRSKQTKSTIGVM
Sbjct: 1   MDLGAITKYSALHAKPNGLILQYGTAGFRTKAEHLDHVMFRMGLLAVLRSKQTKSTIGVM 60

Query: 61  VTASHNPEEDNGVKLVDPLGEMLAPSWEEHATCLANAEEQDMQRVLIDISEKEAVNLQQD 120
           VTASHNPEEDNGVKLVDPLGEMLAPSWEEHATCLANAEEQDMQRVLIDISEKEAVNLQQD
Sbjct: 61  VTASHNPEEDNGVKLVDPLGEMLAPSWEEHATCLANAEEQDMQRVLIDISEKEAVNLQQD 120

Query: 121 AFVVIGRDTRPSSEKLSQSVIDGVTVLGGQFHDYGLLTTPQLHYMVYCRNTGGRYGKATI 180
           AFVVIGRDTRPSSEKLSQSVIDGVTVLGGQFHDYGLLTTPQLHYMVYCRNTGGRYGKATI
Sbjct: 121 AFVVIGRDTRPSSEKLSQSVIDGVTVLGGQFHDYGLLTTPQLHYMVYCRNTGGRYGKATI 180

Query: 181 EGYYQKLSKAFVELTKQASCSGDEYRSLKVDCANGIGALKLREMEHYFSQGLSVQLFNDG 240
           EGYYQKLSKAFVELTKQASCSGDEYRSLKVDCANGIGALKLREMEHYFSQGLSVQLFNDG
Sbjct: 181 EGYYQKLSKAFVELTKQASCSGDEYRSLKVDCANGIGALKLREMEHYFSQGLSVQLFNDG 240

Query: 241 SKGKLNHLCGADFVKSHQKPPQGMEIKSNERCCSFDGDADRIVYYYHDADGHFHLIDGDK 300
           SKGKLNHLCGADFVKSHQKPPQGMEIKSNERCCSFDGDADRIVYYYHDADGHFHLIDGDK
Sbjct: 241 SKGKLNHLCGADFVKSHQKPPQGMEIKSNERCCSFDGDADRIVYYYHDADGHFHLIDGDK 300

Query: 301 IATLISSFLKELLVEIGESLNIGVVQTAYANGSSTRYLEEVMKVPVYCTKTGVKHLHHKA 360
           IATLISSFLKELLVEIGESLNIGVVQTAYANGSSTRYLEEVMKVPVYCTKTGVKHLHHKA
Sbjct: 301 IATLISSFLKELLVEIGESLNIGVVQTAYANGSSTRYLEEVMKVPVYCTKTGVKHLHHKA 360

Query: 361 QEFDIGVYFEANGHGTALFSTAVEMKIKQSAEQLEDKKRKAAKMLENIIDLFNQAAGDAI 420
           QEFDIGVYFEANGHGTALFSTAVEMKIKQSAEQLEDKKRKAAKMLENIIDLFNQAAGDAI
Sbjct: 361 QEFDIGVYFEANGHGTALFSTAVEMKIKQSAEQLEDKKRKAAKMLENIIDLFNQAAGDAI 420

Query: 421 SDMLVIEAILALKGLTVQQWDALYTDLPNRQLKVQVADRRVISTTDAERQAVTPPGLQEA 480
           SDMLVIEAILALKGLTVQQWDALYTDLPNRQLKVQVADRRVISTTDAERQAVTPPGLQEA
Sbjct: 421 SDMLVIEAILALKGLTVQQWDALYTDLPNRQLKVQVADRRVISTTDAERQAVTPPGLQEA 480

Query: 481 INDLVKKYKLSRAFVRPSGTEDVVRVYAEADSQESADHLAHEVSLAVFQLAGGIGERPQP 540
           INDLVKKYKLSRAFVRPSGTEDVVRVYAEADSQESADHLAHEVSLAVFQLAGGIGERPQP
Sbjct: 481 INDLVKKYKLSRAFVRPSGTEDVVRVYAEADSQESADHLAHEVSLAVFQLAGGIGERPQP 540

Query: 541 GF 542
           GF
Sbjct: 541 GF 542


>gi|31377548 phosphoglucomutase 2-like 1 [Homo sapiens]
          Length = 622

 Score = 37.0 bits (84), Expect = 0.046
 Identities = 19/50 (38%), Positives = 30/50 (60%), Gaps = 1/50 (2%)

Query: 51  KQTKSTIGVMVTASHNPEEDNGVKLVDPLG-EMLAPSWEEHATCLANAEE 99
           ++ K+  GVM+TASHN +EDNG K+    G ++ +P  +E   C+    E
Sbjct: 162 QKLKAVAGVMITASHNRKEDNGYKVYWETGAQITSPHDKEILKCIEECVE 211


>gi|63055049 phosphoglucomutase 2 [Homo sapiens]
          Length = 612

 Score = 35.8 bits (81), Expect = 0.10
 Identities = 18/51 (35%), Positives = 33/51 (64%), Gaps = 5/51 (9%)

Query: 54  KSTIGVMVTASHNPEEDNGVKLV-DPLGEMLAPSWEEHATCLANAEEQDMQ 103
           K   G+M+TASHNP++DNG K+  D   ++++P    H   ++ A E++++
Sbjct: 155 KLCAGIMITASHNPKQDNGYKVYWDNGAQIISP----HDKGISQAIEENLE 201


>gi|115298678 complement component 3 precursor [Homo sapiens]
          Length = 1663

 Score = 32.0 bits (71), Expect = 1.5
 Identities = 18/56 (32%), Positives = 27/56 (48%), Gaps = 2/56 (3%)

Query: 218  ALKLREMEHYFSQGLSVQLFNDGSKGKLNHLCGADFVKSHQKPPQGMEIKSNERCC 273
            ALKL E +HY   GLS   +  G K  L+++ G D    H       + + N++ C
Sbjct: 1593 ALKLEEKKHYLMWGLSSDFW--GEKPNLSYIIGKDTWVEHWPEEDECQDEENQKQC 1646


>gi|169214179 PREDICTED: similar to complement component 3 [Homo
           sapiens]
          Length = 390

 Score = 32.0 bits (71), Expect = 1.5
 Identities = 18/56 (32%), Positives = 27/56 (48%), Gaps = 2/56 (3%)

Query: 218 ALKLREMEHYFSQGLSVQLFNDGSKGKLNHLCGADFVKSHQKPPQGMEIKSNERCC 273
           ALKL E +HY   GLS   +  G K  L+++ G D    H       + + N++ C
Sbjct: 320 ALKLEEKKHYLMWGLSSDFW--GEKPNLSYIIGKDTWVEHWPEEDECQDEENQKQC 373


>gi|239787829 glioma tumor suppressor candidate region gene 2 [Homo
           sapiens]
          Length = 478

 Score = 30.8 bits (68), Expect = 3.3
 Identities = 20/69 (28%), Positives = 34/69 (49%), Gaps = 7/69 (10%)

Query: 76  VDPLGEMLAPSWEEHATCLANAEEQDMQRVLIDISEKEAVNLQQDAFVVIGRDTRPSSEK 135
           V P G    PS+E+H T L+ A E ++QR      +KEA  L++    +   +   + E 
Sbjct: 240 VAPAGASYNPSFEDHQTLLSAAHEVELQR------QKEAEKLERQ-LALPATEQAATQES 292

Query: 136 LSQSVIDGV 144
             Q + +G+
Sbjct: 293 TFQELCEGL 301


>gi|166235140 seizure related 6 homolog (mouse)-like 2 isoform 4
           [Homo sapiens]
          Length = 809

 Score = 30.0 bits (66), Expect = 5.6
 Identities = 17/71 (23%), Positives = 37/71 (52%), Gaps = 7/71 (9%)

Query: 72  GVKLVDPLGEMLAPSWEEHAT----CLANAEEQDMQRVLIDISEKEAVNLQQDAFVVIGR 127
           G +L +P G +L+P W +  +    C+     Q+ +R+L+ +   E +N+++   + +  
Sbjct: 414 GGELSEPAGVVLSPDWPQSYSPGQDCVWGVHVQEEKRILLQV---EILNVREGDMLTLFD 470

Query: 128 DTRPSSEKLSQ 138
              PS+  L+Q
Sbjct: 471 GDGPSARVLAQ 481


>gi|166235138 seizure related 6 homolog (mouse)-like 2 isoform 3
           [Homo sapiens]
          Length = 840

 Score = 30.0 bits (66), Expect = 5.6
 Identities = 17/71 (23%), Positives = 37/71 (52%), Gaps = 7/71 (9%)

Query: 72  GVKLVDPLGEMLAPSWEEHAT----CLANAEEQDMQRVLIDISEKEAVNLQQDAFVVIGR 127
           G +L +P G +L+P W +  +    C+     Q+ +R+L+ +   E +N+++   + +  
Sbjct: 458 GGELSEPAGVVLSPDWPQSYSPGQDCVWGVHVQEEKRILLQV---EILNVREGDMLTLFD 514

Query: 128 DTRPSSEKLSQ 138
              PS+  L+Q
Sbjct: 515 GDGPSARVLAQ 525


>gi|166235136 seizure related 6 homolog (mouse)-like 2 isoform 2
           [Homo sapiens]
          Length = 910

 Score = 30.0 bits (66), Expect = 5.6
 Identities = 17/71 (23%), Positives = 37/71 (52%), Gaps = 7/71 (9%)

Query: 72  GVKLVDPLGEMLAPSWEEHAT----CLANAEEQDMQRVLIDISEKEAVNLQQDAFVVIGR 127
           G +L +P G +L+P W +  +    C+     Q+ +R+L+ +   E +N+++   + +  
Sbjct: 528 GGELSEPAGVVLSPDWPQSYSPGQDCVWGVHVQEEKRILLQV---EILNVREGDMLTLFD 584

Query: 128 DTRPSSEKLSQ 138
              PS+  L+Q
Sbjct: 585 GDGPSARVLAQ 595


>gi|6912612 seizure related 6 homolog (mouse)-like 2 isoform 1 [Homo
           sapiens]
          Length = 853

 Score = 30.0 bits (66), Expect = 5.6
 Identities = 17/71 (23%), Positives = 37/71 (52%), Gaps = 7/71 (9%)

Query: 72  GVKLVDPLGEMLAPSWEEHAT----CLANAEEQDMQRVLIDISEKEAVNLQQDAFVVIGR 127
           G +L +P G +L+P W +  +    C+     Q+ +R+L+ +   E +N+++   + +  
Sbjct: 458 GGELSEPAGVVLSPDWPQSYSPGQDCVWGVHVQEEKRILLQV---EILNVREGDMLTLFD 514

Query: 128 DTRPSSEKLSQ 138
              PS+  L+Q
Sbjct: 515 GDGPSARVLAQ 525


>gi|156151411 hypothetical protein LOC80185 [Homo sapiens]
          Length = 508

 Score = 29.6 bits (65), Expect = 7.3
 Identities = 16/59 (27%), Positives = 31/59 (52%)

Query: 29  RTKAEHLDHVMFRMGLLAVLRSKQTKSTIGVMVTASHNPEEDNGVKLVDPLGEMLAPSW 87
           RT A +L   + R+G+L V   K+ +  I   +     PEE+  +K+++ L  ++  +W
Sbjct: 360 RTYARNLPAFVNRLGILTVRHLKRLERVIIGYLEVYDGPEEEARLKILETLKLLMQHTW 418


>gi|156151409 hypothetical protein LOC80185 [Homo sapiens]
          Length = 508

 Score = 29.6 bits (65), Expect = 7.3
 Identities = 16/59 (27%), Positives = 31/59 (52%)

Query: 29  RTKAEHLDHVMFRMGLLAVLRSKQTKSTIGVMVTASHNPEEDNGVKLVDPLGEMLAPSW 87
           RT A +L   + R+G+L V   K+ +  I   +     PEE+  +K+++ L  ++  +W
Sbjct: 360 RTYARNLPAFVNRLGILTVRHLKRLERVIIGYLEVYDGPEEEARLKILETLKLLMQHTW 418


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.317    0.134    0.383 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 19,369,014
Number of Sequences: 37866
Number of extensions: 797833
Number of successful extensions: 1945
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 7
Number of HSP's that attempted gapping in prelim test: 1936
Number of HSP's gapped (non-prelim): 16
length of query: 542
length of database: 18,247,518
effective HSP length: 107
effective length of query: 435
effective length of database: 14,195,856
effective search space: 6175197360
effective search space used: 6175197360
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 64 (29.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.