Guide to the Human Genome
Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help
Name: PGM2 Sequence: fasta or formatted (612aa) NCBI GI: 63055049
Description:

phosphoglucomutase 2

Referenced in:

Glycogen

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             8.8         54           2
 C cysteine            1.5          9           2
 D aspartate           5.9         36           2
 E glutamate           6.5         40           2
 F phenylalanine       5.6         34           2
 G glycine             6.5         40           2
 H histidine           2.1         13           1
 I isoleucine          5.2         32           2
 K lysine              7.8         48           2
 L leucine             8.5         52           2
 M methionine          1.6         10           1
 N asparagine          4.1         25           2
 P proline             5.2         32           2
 Q glutamine           4.2         26           2
 R arginine            3.8         23           2
 S serine              7.7         47           2
 T threonine           5.6         34           2
 V valine              4.6         28           1
 W tryptophan          1.6         10           2
 Y tyrosine            3.1         19           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   phosphoglucomutase 2 
PGM2L1                0.593   phosphoglucomutase 2-like 1 
PGM3                  0.009   phosphoglucomutase 3 
PGM1                  0.007   phosphoglucomutase 1 
ERCC2                 0.006   excision repair cross-complementing rodent repair d...
ERCC2                 0.006   excision repair cross-complementing rodent repair de...
PDE4B                 0.005   phosphodiesterase 4B isoform 1 
PDE4B                 0.005   phosphodiesterase 4B isoform 3 
PDE4B                 0.005   phosphodiesterase 4B isoform 2 
PDE4B                 0.005   phosphodiesterase 4B isoform 1 
KDM6B                 0.004   lysine (K)-specific demethylase 6B 
PGM5                  0.004   phosphoglucomutase 5 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help

Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

CSHL Press